RNA–Protein interactions for RNA: ENSMUST00000044166.8

Cdc40-201, Transcript of Pre-mRNA-processing factor 17, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Cdc40, Length 3,534 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Cdc40-201ENSMUST00000044166 Ttc39cQ8VE09 580 aa8.58□□□□□ -1.04
Cdc40-201ENSMUST00000044166 Tceal1Q921P9 165 aa8.58□□□□□ -1.04
Cdc40-201ENSMUST00000044166 Sesn3Q9CYP7 492 aa8.58□□□□□ -1.04
Cdc40-201ENSMUST00000044166 Bcl2l12Q9D3J3 255 aa8.58□□□□□ -1.04
Cdc40-201ENSMUST00000044166 Ap2b1Q9DBG3 937 aa8.58□□□□□ -1.04
Cdc40-201ENSMUST00000044166 CtsrQ9JIA9 334 aa8.58□□□□□ -1.04
Cdc40-201ENSMUST00000044166 Arhgef10Q8C033 1345 aa8.58□□□□□ -1.04
Cdc40-201ENSMUST00000044166 Aff2O55112 1272 aa8.58□□□□□ -1.04
Cdc40-201ENSMUST00000044166 SagP20443 403 aa8.58□□□□□ -1.04
Cdc40-201ENSMUST00000044166 ZfaP23607 742 aa8.58□□□□□ -1.04
Cdc40-201ENSMUST00000044166 Pms2P54279 859 aa8.58□□□□□ -1.04
Cdc40-201ENSMUST00000044166 Glt6d1Q2NKH9 311 aa8.58□□□□□ -1.04
Cdc40-201ENSMUST00000044166 GsapQ3TCV3 858 aa8.58□□□□□ -1.04
Cdc40-201ENSMUST00000044166 Micall2Q3TN34 1009 aa8.58□□□□□ -1.04
Cdc40-201ENSMUST00000044166 StimateQ3UF25 288 aa8.58□□□□□ -1.04
Cdc40-201ENSMUST00000044166 Nek10Q3UGM2 1111 aa8.58□□□□□ -1.04
Cdc40-201ENSMUST00000044166 Brd9Q3UQU0 596 aaKnown RBP8.58□□□□□ -1.04
Cdc40-201ENSMUST00000044166 Brsk1Q5RJI5 778 aa8.58□□□□□ -1.04
Cdc40-201ENSMUST00000044166 Tcf12Q61286 706 aa8.58□□□□□ -1.04
Cdc40-201ENSMUST00000044166 Dpysl3Q62188 570 aa8.58□□□□□ -1.04
Cdc40-201ENSMUST00000044166 Frmd5Q6P5H6 517 aa8.58□□□□□ -1.04
Cdc40-201ENSMUST00000044166 Ccdc117Q6PB51 277 aa8.58□□□□□ -1.04
Cdc40-201ENSMUST00000044166 RfflQ6ZQM0 377 aa8.58□□□□□ -1.04
Cdc40-201ENSMUST00000044166 Ccnt2Q7TQK0 723 aa8.58□□□□□ -1.04
Cdc40-201ENSMUST00000044166 Cdkn2aipQ8BI72 563 aa8.58□□□□□ -1.04
Cdc40-201ENSMUST00000044166 Il33Q8BVZ5 266 aa8.58□□□□□ -1.04
Cdc40-201ENSMUST00000044166 NcaphQ8C156 731 aa8.58□□□□□ -1.04
Cdc40-201ENSMUST00000044166 Tmem145Q8C4U2 746 aa8.58□□□□□ -1.04
Cdc40-201ENSMUST00000044166 Gatad2aQ8CHY6 629 aaKnown RBP8.58□□□□□ -1.04
Cdc40-201ENSMUST00000044166 Ascc2Q91WR3 749 aa8.58□□□□□ -1.04
Cdc40-201ENSMUST00000044166 Marc2Q922Q1 338 aa8.58□□□□□ -1.04
Cdc40-201ENSMUST00000044166 Ist1Q9CX00 362 aa8.58□□□□□ -1.04
Cdc40-201ENSMUST00000044166 Hes6Q9JHE6 224 aa8.58□□□□□ -1.04
Cdc40-201ENSMUST00000044166 Gpc6Q9R087 555 aa8.58□□□□□ -1.04
Cdc40-201ENSMUST00000044166 Kmt2eQ3UG20 1868 aa8.58□□□□□ -1.04
Cdc40-201ENSMUST00000044166 2210011C24RikA0A087WQ89 206 aa8.58□□□□□ -1.04
Cdc40-201ENSMUST00000044166 Gm11985A0A1B0GS61 206 aa8.58□□□□□ -1.04
Cdc40-201ENSMUST00000044166 Gm12248A0A1W2P8B8 313 aa8.58□□□□□ -1.04
Cdc40-201ENSMUST00000044166 Lrrc72A0A1Y7VMI0 288 aa8.58□□□□□ -1.04
Cdc40-201ENSMUST00000044166 Cpb1B2RS76 415 aa8.58□□□□□ -1.04
Cdc40-201ENSMUST00000044166 Ifi207E9Q3L4 978 aa8.58□□□□□ -1.04
Cdc40-201ENSMUST00000044166 Gm21897J3KMP5 500 aa8.58□□□□□ -1.04
Cdc40-201ENSMUST00000044166 Gm21750L7N228 499 aa8.58□□□□□ -1.04
Cdc40-201ENSMUST00000044166 Tulp2P46686 562 aa8.58□□□□□ -1.04
Cdc40-201ENSMUST00000044166 St3gal1P54751 337 aa8.58□□□□□ -1.04
Cdc40-201ENSMUST00000044166 Vamp7P70280 220 aa8.58□□□□□ -1.04
Cdc40-201ENSMUST00000044166 Ptcd3Q14C51 685 aaKnown RBP8.58□□□□□ -1.04
Cdc40-201ENSMUST00000044166 SpoplQ2M2N2 392 aa8.58□□□□□ -1.04
Cdc40-201ENSMUST00000044166 Slc17a7Q3TXX4 560 aa8.58□□□□□ -1.04
Cdc40-201ENSMUST00000044166 Prickle1Q3U5C7 832 aa8.58□□□□□ -1.04
Cdc40-201ENSMUST00000044166 Magee2Q52KG3 523 aa8.58□□□□□ -1.04
Cdc40-201ENSMUST00000044166 Dnajc1Q61712 552 aaKnown RBP8.58□□□□□ -1.04
Cdc40-201ENSMUST00000044166 Magea3Q6T340 320 aa8.58□□□□□ -1.04
Cdc40-201ENSMUST00000044166 Scgb2b2Q6UGQ3 114 aa8.58□□□□□ -1.04
Cdc40-201ENSMUST00000044166 Dzip3Q7TPV2 1204 aa8.58□□□□□ -1.04
Cdc40-201ENSMUST00000044166 Mtmr12Q80TA6 747 aa8.58□□□□□ -1.04
Cdc40-201ENSMUST00000044166 Gnl3Q8CI11 538 aaKnown RBP8.58□□□□□ -1.04
Cdc40-201ENSMUST00000044166 Emilin2Q8K482 1074 aa8.58□□□□□ -1.04
Cdc40-201ENSMUST00000044166 Pdik1lQ8QZR7 341 aa8.58□□□□□ -1.04
Cdc40-201ENSMUST00000044166 McmbpQ8R3C0 642 aa8.58□□□□□ -1.04
Cdc40-201ENSMUST00000044166 PrameQ9D4Z5 464 aa8.58□□□□□ -1.04
Cdc40-201ENSMUST00000044166 Ppp2r3cQ9JK24 453 aa8.58□□□□□ -1.04
Cdc40-201ENSMUST00000044166 Dlc1Q9R0Z9 1092 aa8.58□□□□□ -1.04
Cdc40-201ENSMUST00000044166 Col5a2Q3U962 1497 aa8.57□□□□□ -1.04
Cdc40-201ENSMUST00000044166 Lrrc63A6H694 637 aa8.57□□□□□ -1.04
Cdc40-201ENSMUST00000044166 Zbed6D2EAC2 980 aa8.57□□□□□ -1.04
Cdc40-201ENSMUST00000044166 Gm4841E9QAA8 417 aa8.57□□□□□ -1.04
Cdc40-201ENSMUST00000044166 Vmn2r15L7N2A0 855 aa8.57□□□□□ -1.04
Cdc40-201ENSMUST00000044166 Adam15O88839 864 aa8.57□□□□□ -1.04
Cdc40-201ENSMUST00000044166 Rpl7aP12970 266 aaKnown RBP8.57□□□□□ -1.04
Cdc40-201ENSMUST00000044166 Hoxc13P50207 328 aa8.57□□□□□ -1.04
Cdc40-201ENSMUST00000044166 Nudt1P53368 156 aa8.57□□□□□ -1.04
Cdc40-201ENSMUST00000044166 Rad54lP70270 747 aa8.57□□□□□ -1.04
Cdc40-201ENSMUST00000044166 Ptgs2Q05769 604 aa8.57□□□□□ -1.04
Cdc40-201ENSMUST00000044166 Spata18Q0P557 537 aa8.57□□□□□ -1.04
Cdc40-201ENSMUST00000044166 Lipo3Q3UT41 399 aa8.57□□□□□ -1.04
Cdc40-201ENSMUST00000044166 Kctd8Q50H33 476 aa8.57□□□□□ -1.04
Cdc40-201ENSMUST00000044166 Ppp1r13lQ5I1X5 824 aa8.57□□□□□ -1.04
Cdc40-201ENSMUST00000044166 Tcf4Q60722 670 aa8.57□□□□□ -1.04
Cdc40-201ENSMUST00000044166 Pdcd4Q61823 469 aa8.57□□□□□ -1.04
Cdc40-201ENSMUST00000044166 Q8BGA7 448 aa8.57□□□□□ -1.04
Cdc40-201ENSMUST00000044166 Vgll2Q8BGW8 322 aa8.57□□□□□ -1.04
Cdc40-201ENSMUST00000044166 Osbpl2Q8BX94 484 aa8.57□□□□□ -1.04
Cdc40-201ENSMUST00000044166 Bmt2Q8BXK4 403 aa8.57□□□□□ -1.04
Cdc40-201ENSMUST00000044166 Fam204aQ8C6C7 236 aa8.57□□□□□ -1.04
Cdc40-201ENSMUST00000044166 BsndQ8VIM4 307 aa8.57□□□□□ -1.04
Cdc40-201ENSMUST00000044166 Snapc2Q91XA5 359 aa8.57□□□□□ -1.04
Cdc40-201ENSMUST00000044166 Ggt7Q99JP7 662 aa8.57□□□□□ -1.04
Cdc40-201ENSMUST00000044166 Ankef1Q9D2J7 775 aa8.57□□□□□ -1.04
Cdc40-201ENSMUST00000044166 ParvaQ9EPC1 372 aa8.57□□□□□ -1.04
Cdc40-201ENSMUST00000044166 Kifc1Q9QWT9 674 aa8.57□□□□□ -1.04
Cdc40-201ENSMUST00000044166 Rabgap1lA6H6A9 815 aa8.57□□□□□ -1.04
Cdc40-201ENSMUST00000044166 DgkhD3YXJ0 1156 aa8.57□□□□□ -1.04
Cdc40-201ENSMUST00000044166 Vmn2r59E9PUT5 865 aa8.57□□□□□ -1.04
Cdc40-201ENSMUST00000044166 Slc9a3G3X939 829 aa8.57□□□□□ -1.04
Cdc40-201ENSMUST00000044166 Cbfa2t2O70374 594 aa8.57□□□□□ -1.04
Cdc40-201ENSMUST00000044166 NppaP05125 152 aa8.57□□□□□ -1.04
Cdc40-201ENSMUST00000044166 Myl4P09541 193 aaKnown RBP8.57□□□□□ -1.04
Cdc40-201ENSMUST00000044166 Mcpt1P11034 246 aa8.57□□□□□ -1.04
Cdc40-201ENSMUST00000044166 HdcP23738 662 aa8.57□□□□□ -1.04
Retrieved 100 of 22,080 RNA–protein pairs in 24.9 ms