RNA–Protein interactions for RNA: ENSMUST00000041639.6

Syne1-201, Transcript of Nesprin-1, mousemouse

TSL 1 (best) BASIC

Gene Syne1, Length 6,990 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Syne1-201ENSMUST00000041639 AurkcO88445 282 aa10.15□□□□□ -0.79
Syne1-201ENSMUST00000041639 Tp53P02340 387 aa10.15□□□□□ -0.79
Syne1-201ENSMUST00000041639 Gnat1P20612 350 aa10.15□□□□□ -0.79
Syne1-201ENSMUST00000041639 Slc24a2Q14BI1 711 aa10.15□□□□□ -0.79
Syne1-201ENSMUST00000041639 OsbpQ3B7Z2 805 aa10.15□□□□□ -0.79
Syne1-201ENSMUST00000041639 Gcnt3Q5JCT0 437 aa10.15□□□□□ -0.79
Syne1-201ENSMUST00000041639 Dph1Q5NCQ5 438 aa10.15□□□□□ -0.79
Syne1-201ENSMUST00000041639 A1cfQ5YD48 595 aa10.15□□□□□ -0.79
Syne1-201ENSMUST00000041639 Mib1Q80SY4 1006 aa10.15□□□□□ -0.79
Syne1-201ENSMUST00000041639 Spata20Q80YT5 790 aa10.15□□□□□ -0.79
Syne1-201ENSMUST00000041639 Leg1Q8C6C9 337 aa10.15□□□□□ -0.79
Syne1-201ENSMUST00000041639 DnerQ8JZM4 737 aa10.15□□□□□ -0.79
Syne1-201ENSMUST00000041639 Cyp4a12aQ91WL5 508 aa10.15□□□□□ -0.79
Syne1-201ENSMUST00000041639 Npy5rO70342 466 aa10.14□□□□□ -0.79
Syne1-201ENSMUST00000041639 Stx7O70439 261 aa10.14□□□□□ -0.79
Syne1-201ENSMUST00000041639 GemP55041 295 aa10.14□□□□□ -0.79
Syne1-201ENSMUST00000041639 S100gP97816 79 aa10.14□□□□□ -0.79
Syne1-201ENSMUST00000041639 Yy1Q00899 414 aa10.14□□□□□ -0.79
Syne1-201ENSMUST00000041639 Cab39Q06138 341 aa10.14□□□□□ -0.79
Syne1-201ENSMUST00000041639 Plekha7Q3UIL6 1118 aaKnown RBP10.14□□□□□ -0.79
Syne1-201ENSMUST00000041639 Usp7Q6A4J8 1103 aa10.14□□□□□ -0.79
Syne1-201ENSMUST00000041639 Rnaseh2bQ80ZV0 308 aa10.14□□□□□ -0.79
Syne1-201ENSMUST00000041639 Lrrc71Q9D3W5 558 aa10.14□□□□□ -0.79
Syne1-201ENSMUST00000041639 Tmem59Q9QY73 323 aa10.14□□□□□ -0.79
Syne1-201ENSMUST00000041639 Dlc1Q9R0Z9 1092 aa10.14□□□□□ -0.79
Syne1-201ENSMUST00000041639 4921501E09RikA0A0R4J054 908 aa10.14□□□□□ -0.79
Syne1-201ENSMUST00000041639 Lipo2D3YY49 398 aa10.14□□□□□ -0.79
Syne1-201ENSMUST00000041639 Scgb2b7D3YYY1 112 aa10.14□□□□□ -0.79
Syne1-201ENSMUST00000041639 Pik3r2O08908 722 aa10.14□□□□□ -0.79
Syne1-201ENSMUST00000041639 Guca2bO09051 106 aa10.14□□□□□ -0.79
Syne1-201ENSMUST00000041639 Zfy1P10925 782 aa10.14□□□□□ -0.79
Syne1-201ENSMUST00000041639 RarbP22605 482 aa10.14□□□□□ -0.79
Syne1-201ENSMUST00000041639 Sstr1P30873 391 aa10.14□□□□□ -0.79
Syne1-201ENSMUST00000041639 Ephb2P54763 986 aa10.14□□□□□ -0.79
Syne1-201ENSMUST00000041639 Eps8Q08509 821 aa10.14□□□□□ -0.79
Syne1-201ENSMUST00000041639 Atp13a3Q5XF89 1219 aa10.14□□□□□ -0.79
Syne1-201ENSMUST00000041639 Rusc1Q8BG26 893 aa10.14□□□□□ -0.79
Syne1-201ENSMUST00000041639 Dyrk4Q8BI55 632 aa10.14□□□□□ -0.79
Syne1-201ENSMUST00000041639 WdpcpQ8C456 722 aa10.14□□□□□ -0.79
Syne1-201ENSMUST00000041639 CherpQ8CGZ0 936 aaKnown RBP10.14□□□□□ -0.79
Syne1-201ENSMUST00000041639 Unc5bQ8K1S3 945 aa10.14□□□□□ -0.79
Syne1-201ENSMUST00000041639 Cstf3Q99LI7 717 aaKnown RBP10.14□□□□□ -0.79
Syne1-201ENSMUST00000041639 Phf2Q9WTU0 1096 aa10.14□□□□□ -0.79
Syne1-201ENSMUST00000041639 Olfr271-ps1A0A1L1SQH2 283 aa10.14□□□□□ -0.79
Syne1-201ENSMUST00000041639 Slc38a5Q3U1J0 479 aa10.14□□□□□ -0.79
Syne1-201ENSMUST00000041639 SowahdQ8BY98 327 aa10.14□□□□□ -0.79
Syne1-201ENSMUST00000041639 Robo4Q8C310 1012 aa10.14□□□□□ -0.79
Syne1-201ENSMUST00000041639 Eif3lQ8QZY1 564 aaKnown RBP10.14□□□□□ -0.79
Syne1-201ENSMUST00000041639 Iqsec1Q8R0S2 961 aa10.14□□□□□ -0.79
Syne1-201ENSMUST00000041639 Tmem82Q8R115 356 aa10.14□□□□□ -0.79
Syne1-201ENSMUST00000041639 Rxfp2Q91ZZ5 737 aa10.14□□□□□ -0.79
Syne1-201ENSMUST00000041639 GhdcQ99J23 532 aa10.14□□□□□ -0.79
Syne1-201ENSMUST00000041639 ToporslQ9D2F8 683 aa10.14□□□□□ -0.79
Syne1-201ENSMUST00000041639 DcpsQ9DAR7 338 aa10.14□□□□□ -0.79
Syne1-201ENSMUST00000041639 Ndufs3Q9DCT2 263 aaKnown RBP10.14□□□□□ -0.79
Syne1-201ENSMUST00000041639 Ptpn4Q9WU22 926 aa10.14□□□□□ -0.79
Syne1-201ENSMUST00000041639 Lrrc73B2RWC4 316 aa10.14□□□□□ -0.79
Syne1-201ENSMUST00000041639 Olfr611K7N609 323 aa10.14□□□□□ -0.79
Syne1-201ENSMUST00000041639 Olfr612L7N462 323 aa10.14□□□□□ -0.79
Syne1-201ENSMUST00000041639 Tnfrsf11bO08712 401 aa10.14□□□□□ -0.79
Syne1-201ENSMUST00000041639 Cul4aQ3TCH7 759 aa10.14□□□□□ -0.79
Syne1-201ENSMUST00000041639 Pan2Q8BGF7 1200 aaKnown RBP10.14□□□□□ -0.79
Syne1-201ENSMUST00000041639 Scn3bQ8BHK2 215 aa10.14□□□□□ -0.79
Syne1-201ENSMUST00000041639 Tcaf1Q8BNE1 924 aa10.14□□□□□ -0.79
Syne1-201ENSMUST00000041639 Kank2Q8BX02 843 aa10.14□□□□□ -0.79
Syne1-201ENSMUST00000041639 Clip4Q8CI96 704 aa10.14□□□□□ -0.79
Syne1-201ENSMUST00000041639 Smyd2Q8R5A0 433 aa10.14□□□□□ -0.79
Syne1-201ENSMUST00000041639 Hspa12bQ9CZJ2 685 aa10.14□□□□□ -0.79
Syne1-201ENSMUST00000041639 Tm9sf1Q9DBU0 606 aa10.14□□□□□ -0.79
Syne1-201ENSMUST00000041639 Skint6A7XUZ6 1240 aa10.14□□□□□ -0.79
Syne1-201ENSMUST00000041639 Srpk1O70551 648 aaKnown RBP10.14□□□□□ -0.79
Syne1-201ENSMUST00000041639 Orm2P07361 207 aa10.14□□□□□ -0.79
Syne1-201ENSMUST00000041639 AlbP07724 608 aa10.14□□□□□ -0.79
Syne1-201ENSMUST00000041639 Pou2f3P31362 431 aa10.14□□□□□ -0.79
Syne1-201ENSMUST00000041639 Erbb2P70424 1256 aa10.14□□□□□ -0.79
Syne1-201ENSMUST00000041639 Mief2Q5NCS9 454 aa10.14□□□□□ -0.79
Syne1-201ENSMUST00000041639 Zbtb5Q7TQG0 670 aa10.14□□□□□ -0.79
Syne1-201ENSMUST00000041639 Thap3Q8BJ25 218 aa10.14□□□□□ -0.79
Syne1-201ENSMUST00000041639 Snx17Q8BVL3 470 aa10.14□□□□□ -0.79
Syne1-201ENSMUST00000041639 Trim31Q8R0K2 507 aa10.14□□□□□ -0.79
Syne1-201ENSMUST00000041639 Rnf135Q9CWS1 417 aa10.14□□□□□ -0.79
Syne1-201ENSMUST00000041639 FignQ9ERZ6 759 aa10.14□□□□□ -0.79
Syne1-201ENSMUST00000041639 Ercc6l2Q9JIM3 1537 aa10.14□□□□□ -0.79
Syne1-201ENSMUST00000041639 Znf804aA2AKY4 1200 aa10.13□□□□□ -0.79
Syne1-201ENSMUST00000041639 Lilra5D3Z7A9 295 aa10.13□□□□□ -0.79
Syne1-201ENSMUST00000041639 Acot1O55137 419 aa10.13□□□□□ -0.79
Syne1-201ENSMUST00000041639 HdcP23738 662 aa10.13□□□□□ -0.79
Syne1-201ENSMUST00000041639 SarsP26638 512 aaKnown RBP10.13□□□□□ -0.79
Syne1-201ENSMUST00000041639 Fbxw2Q60584 422 aa10.13□□□□□ -0.79
Syne1-201ENSMUST00000041639 RadilQ69Z89 1099 aa10.13□□□□□ -0.79
Syne1-201ENSMUST00000041639 Klhdc10Q6PAR0 439 aa10.13□□□□□ -0.79
Syne1-201ENSMUST00000041639 Ccdc59Q8R2N0 240 aaKnown RBP10.13□□□□□ -0.79
Syne1-201ENSMUST00000041639 Znf445Q8R2V3 986 aa10.13□□□□□ -0.79
Syne1-201ENSMUST00000041639 Rasgrp2Q9QUG9 608 aa10.13□□□□□ -0.79
Syne1-201ENSMUST00000041639 H2afyQ9QZQ8 372 aaKnown RBP10.13□□□□□ -0.79
Syne1-201ENSMUST00000041639 Mettl1Q9Z120 268 aa10.13□□□□□ -0.79
Syne1-201ENSMUST00000041639 CluhQ5SW19 1315 aa10.13□□□□□ -0.79
Syne1-201ENSMUST00000041639 Itgb3O54890 787 aa10.13□□□□□ -0.79
Syne1-201ENSMUST00000041639 Ccnd1P25322 295 aa10.13□□□□□ -0.79
Syne1-201ENSMUST00000041639 Phf8Q80TJ7 1023 aa10.13□□□□□ -0.79
Retrieved 100 of 22,080 RNA–protein pairs in 26.8 ms