RNA–Protein interactions for RNA: ENSMUST00000028580.11

Ccdc34-201, Transcript of Coiled-coil domain-containing protein 34, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ccdc34, Length 2,070 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc34-201ENSMUST00000028580 Papss1Q60967 624 aa20.51■□□□□ 0.87
Ccdc34-201ENSMUST00000028580 Foxn1Q61575 648 aa20.51■□□□□ 0.87
Ccdc34-201ENSMUST00000028580 Sh3rf1Q69ZI1 892 aa20.51■□□□□ 0.87
Ccdc34-201ENSMUST00000028580 Olfr23Q7TRX4 325 aa20.51■□□□□ 0.87
Ccdc34-201ENSMUST00000028580 Arhgap15Q811M1 481 aa20.51■□□□□ 0.87
Ccdc34-201ENSMUST00000028580 Wdr27Q8C5V5 780 aa20.51■□□□□ 0.87
Ccdc34-201ENSMUST00000028580 AA792892Q8C6S1 278 aa20.51■□□□□ 0.87
Ccdc34-201ENSMUST00000028580 Olfr397Q8VEZ6 315 aa20.51■□□□□ 0.87
Ccdc34-201ENSMUST00000028580 Hdhd5Q91WM2 419 aa20.51■□□□□ 0.87
Ccdc34-201ENSMUST00000028580 Traf7Q922B6 594 aa20.51■□□□□ 0.87
Ccdc34-201ENSMUST00000028580 Me2Q99KE1 589 aa20.51■□□□□ 0.87
Ccdc34-201ENSMUST00000028580 Gstt4Q9D4P7 240 aa20.51■□□□□ 0.87
Ccdc34-201ENSMUST00000028580 Ccdc103Q9D9P2 237 aa20.51■□□□□ 0.87
Ccdc34-201ENSMUST00000028580 Gucy1a3Q9ERL9 691 aa20.51■□□□□ 0.87
Ccdc34-201ENSMUST00000028580 Gfra4Q9JJT2 260 aa20.51■□□□□ 0.87
Ccdc34-201ENSMUST00000028580 Akt3Q9WUA6 479 aa20.51■□□□□ 0.87
Ccdc34-201ENSMUST00000028580 TfgQ9Z1A1 397 aa20.51■□□□□ 0.87
Ccdc34-201ENSMUST00000028580 Mzf1S4R1L6 814 aa20.51■□□□□ 0.87
Ccdc34-201ENSMUST00000028580 Gm10721J3QPJ9 223 aa20.5■□□□□ 0.87
Ccdc34-201ENSMUST00000028580 Q3TQQ9 903 aa20.5■□□□□ 0.87
Ccdc34-201ENSMUST00000028580 Alkbh5Q3TSG4 395 aaKnown RBP20.5■□□□□ 0.87
Ccdc34-201ENSMUST00000028580 Fam189a2Q4FZH1 290 aa20.5■□□□□ 0.87
Ccdc34-201ENSMUST00000028580 Rbm12b1Q80YR9 836 aaKnown RBP20.5■□□□□ 0.87
Ccdc34-201ENSMUST00000028580 Aste1Q8BIR2 672 aa20.5■□□□□ 0.87
Ccdc34-201ENSMUST00000028580 Acbd3Q8BMP6 525 aa20.5■□□□□ 0.87
Ccdc34-201ENSMUST00000028580 PygbQ8CI94 843 aaKnown RBP20.5■□□□□ 0.87
Ccdc34-201ENSMUST00000028580 Sulf1Q8K007 870 aa20.5■□□□□ 0.87
Ccdc34-201ENSMUST00000028580 Angel2Q8K1C0 544 aa20.5■□□□□ 0.87
Ccdc34-201ENSMUST00000028580 Dtnbp1Q91WZ8 352 aa20.5■□□□□ 0.87
Ccdc34-201ENSMUST00000028580 HgsQ99LI8 775 aa20.5■□□□□ 0.87
Ccdc34-201ENSMUST00000028580 Grk2Q99MK8 689 aa20.5■□□□□ 0.87
Ccdc34-201ENSMUST00000028580 Q9CPS8 106 aa20.5■□□□□ 0.87
Ccdc34-201ENSMUST00000028580 Nsmce1Q9D720 266 aa20.5■□□□□ 0.87
Ccdc34-201ENSMUST00000028580 Morc1Q9WVL5 950 aa20.5■□□□□ 0.87
Ccdc34-201ENSMUST00000028580 Twf2Q9Z0P5 349 aaKnown RBP20.5■□□□□ 0.87
Ccdc34-201ENSMUST00000028580 Smok3aC0HKC8 504 aa20.5■□□□□ 0.87
Ccdc34-201ENSMUST00000028580 Smok3bC0HKC9 504 aa20.5■□□□□ 0.87
Ccdc34-201ENSMUST00000028580 DldO08749 509 aaKnown RBP20.5■□□□□ 0.87
Ccdc34-201ENSMUST00000028580 Mtco1P00397 514 aa20.5■□□□□ 0.87
Ccdc34-201ENSMUST00000028580 P01650 108 aa20.5■□□□□ 0.87
Ccdc34-201ENSMUST00000028580 P01653 108 aa20.5■□□□□ 0.87
Ccdc34-201ENSMUST00000028580 Tbxas1P36423 533 aa20.5■□□□□ 0.87
Ccdc34-201ENSMUST00000028580 PfkmP47857 780 aaKnown RBP20.5■□□□□ 0.87
Ccdc34-201ENSMUST00000028580 Slc12a1P55014 1095 aa20.5■□□□□ 0.87
Ccdc34-201ENSMUST00000028580 Mark2Q05512 776 aa20.5■□□□□ 0.87
Ccdc34-201ENSMUST00000028580 Glt6d1Q2NKH9 311 aa20.5■□□□□ 0.87
Ccdc34-201ENSMUST00000028580 Znf746Q3U133 652 aa20.5■□□□□ 0.87
Ccdc34-201ENSMUST00000028580 Zdhhc17Q80TN5 632 aa20.5■□□□□ 0.87
Ccdc34-201ENSMUST00000028580 Ddx42Q810A7 929 aaKnown RBP20.5■□□□□ 0.87
Ccdc34-201ENSMUST00000028580 SowahaQ8BLS7 548 aa20.5■□□□□ 0.87
Ccdc34-201ENSMUST00000028580 Neto2Q8BNJ6 525 aa20.5■□□□□ 0.87
Ccdc34-201ENSMUST00000028580 Phactr3Q8BYK5 558 aa20.5■□□□□ 0.87
Ccdc34-201ENSMUST00000028580 Dis3lQ8C0S1 1053 aa20.5■□□□□ 0.87
Ccdc34-201ENSMUST00000028580 Rfx6Q8C7R7 927 aa20.5■□□□□ 0.87
Ccdc34-201ENSMUST00000028580 Mkl1Q8K4J6 964 aa20.5■□□□□ 0.87
Ccdc34-201ENSMUST00000028580 Polr3cQ9D483 533 aa20.5■□□□□ 0.87
Ccdc34-201ENSMUST00000028580 ParvbQ9ES46 365 aa20.5■□□□□ 0.87
Ccdc34-201ENSMUST00000028580 ErmapQ9JLN5 566 aa20.5■□□□□ 0.87
Ccdc34-201ENSMUST00000028580 St6galnac4Q9R2B6 360 aa20.5■□□□□ 0.87
Ccdc34-201ENSMUST00000028580 Pdcd2P46718 343 aa20.49■□□□□ 0.87
Ccdc34-201ENSMUST00000028580 Prmt9Q3U3W5 846 aa20.49■□□□□ 0.87
Ccdc34-201ENSMUST00000028580 SnrpaQ62189 287 aaKnown RBP20.49■□□□□ 0.87
Ccdc34-201ENSMUST00000028580 Tll1Q62381 1013 aa20.49■□□□□ 0.87
Ccdc34-201ENSMUST00000028580 Tp53inp2Q8CFU8 221 aa20.49■□□□□ 0.87
Ccdc34-201ENSMUST00000028580 Prpsap2Q8R574 369 aa20.49■□□□□ 0.87
Ccdc34-201ENSMUST00000028580 Mgrn1Q9D074 532 aa20.49■□□□□ 0.87
Ccdc34-201ENSMUST00000028580 PollQ9QXE2 573 aaKnown RBP20.49■□□□□ 0.87
Ccdc34-201ENSMUST00000028580 Nup210lQ9D2F7 1881 aa20.49■□□□□ 0.87
Ccdc34-201ENSMUST00000028580 Olfr391-psA0A0U1RNJ4 312 aa20.49■□□□□ 0.87
Ccdc34-201ENSMUST00000028580 Slc4a11A2AJN7 862 aa20.49■□□□□ 0.87
Ccdc34-201ENSMUST00000028580 SmgcF6VRN1 385 aa20.49■□□□□ 0.87
Ccdc34-201ENSMUST00000028580 Abhd12bG3UZN6 359 aa20.49■□□□□ 0.87
Ccdc34-201ENSMUST00000028580 Tnfrsf11bO08712 401 aa20.49■□□□□ 0.87
Ccdc34-201ENSMUST00000028580 Calb2Q08331 271 aa20.49■□□□□ 0.87
Ccdc34-201ENSMUST00000028580 Nsun2Q1HFZ0 757 aaKnown RBP20.49■□□□□ 0.87
Ccdc34-201ENSMUST00000028580 Togaram2Q3TYG6 1002 aa20.49■□□□□ 0.87
Ccdc34-201ENSMUST00000028580 Nek10Q3UGM2 1111 aa20.49■□□□□ 0.87
Ccdc34-201ENSMUST00000028580 Fam8a1Q3URQ4 399 aa20.49■□□□□ 0.87
Ccdc34-201ENSMUST00000028580 Trpm4Q7TN37 1213 aa20.49■□□□□ 0.87
Ccdc34-201ENSMUST00000028580 Exoc3l1Q8BI71 739 aa20.49■□□□□ 0.87
Ccdc34-201ENSMUST00000028580 Rps6kc1Q8BLK9 1056 aa20.49■□□□□ 0.87
Ccdc34-201ENSMUST00000028580 Kct2Q8K201 259 aa20.49■□□□□ 0.87
Ccdc34-201ENSMUST00000028580 Ppp1r16bQ8VHQ3 568 aa20.49■□□□□ 0.87
Ccdc34-201ENSMUST00000028580 Prmt7Q922X9 692 aa20.49■□□□□ 0.87
Ccdc34-201ENSMUST00000028580 Tas1r2Q925I4 843 aa20.49■□□□□ 0.87
Ccdc34-201ENSMUST00000028580 Nt5c3aQ9D020 331 aa20.49■□□□□ 0.87
Ccdc34-201ENSMUST00000028580 Mms19Q9D071 1031 aa20.49■□□□□ 0.87
Ccdc34-201ENSMUST00000028580 Fzd9Q9R216 592 aa20.49■□□□□ 0.87
Ccdc34-201ENSMUST00000028580 Spin2fJ3QPU0 254 aa20.48■□□□□ 0.87
Ccdc34-201ENSMUST00000028580 Ptpn9O35239 593 aa20.48■□□□□ 0.87
Ccdc34-201ENSMUST00000028580 RcvrnP34057 202 aa20.48■□□□□ 0.87
Ccdc34-201ENSMUST00000028580 Oas1fQ14AZ4 364 aa20.48■□□□□ 0.87
Ccdc34-201ENSMUST00000028580 Trpv1Q704Y3 839 aa20.48■□□□□ 0.87
Ccdc34-201ENSMUST00000028580 Suz12Q80U70 741 aaKnown RBP20.48■□□□□ 0.87
Ccdc34-201ENSMUST00000028580 Arfip2Q8K221 341 aa20.48■□□□□ 0.87
Ccdc34-201ENSMUST00000028580 Evi2bQ8VD58 444 aa20.48■□□□□ 0.87
Ccdc34-201ENSMUST00000028580 Nt5c1bQ91YE9 573 aa20.48■□□□□ 0.87
Ccdc34-201ENSMUST00000028580 Rex1bdQ9CYZ6 169 aa20.48■□□□□ 0.87
Ccdc34-201ENSMUST00000028580 Acbd6Q9D061 282 aa20.48■□□□□ 0.87
Ccdc34-201ENSMUST00000028580 Ubxn11Q9D572 484 aa20.48■□□□□ 0.87
Retrieved 100 of 22,080 RNA–protein pairs in 263.6 ms