RNA–Protein interactions for RNA: YOL090W

MSH2, Transcript of Protein that binds to DNA mismatches, yeastyeast

Gene MSH2, Length 2,895 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MSH2YOL090W YDL129WQ07555 291 aa3.94□□□□□ -1.78
MSH2YOL090W KAR1P11927 433 aa3.93□□□□□ -1.78
MSH2YOL090W GRX1P25373 110 aaKnown RBP3.93□□□□□ -1.78
MSH2YOL090W SUV3P32580 737 aa3.93□□□□□ -1.78
MSH2YOL090W TIM23P32897 222 aa3.93□□□□□ -1.78
MSH2YOL090W KTR2P33550 425 aa3.93□□□□□ -1.78
MSH2YOL090W YGL081WP53156 320 aa3.93□□□□□ -1.78
MSH2YOL090W ESF1Q06344 628 aaKnown RBP3.93□□□□□ -1.78
MSH2YOL090W FRA1Q07825 749 aa3.93□□□□□ -1.78
MSH2YOL090W ENV9Q08651 330 aa3.93□□□□□ -1.78
MSH2YOL090W ERP2P39704 215 aa3.93□□□□□ -1.78
MSH2YOL090W NOP2P40991 618 aaKnown RBP3.93□□□□□ -1.78
MSH2YOL090W ITC1P53125 1264 aa3.93□□□□□ -1.78
MSH2YOL090W FOL1P53848 824 aa3.93□□□□□ -1.78
MSH2YOL090W NCR1Q12200 1170 aa3.93□□□□□ -1.78
MSH2YOL090W TY1B-BRQ12193 1756 aa3.93□□□□□ -1.78
MSH2YOL090W TY1B-GR3Q12316 1755 aa3.93□□□□□ -1.78
MSH2YOL090W TY1B-ORQ92393 1755 aa3.93□□□□□ -1.78
MSH2YOL090W RPS26AP39938 119 aaKnown RBP3.92□□□□□ -1.78
MSH2YOL090W RPS26BP39939 119 aaKnown RBP3.92□□□□□ -1.78
MSH2YOL090W GIR2Q03768 265 aaPredicted RBP3.92□□□□□ -1.78
MSH2YOL090W YPR097WQ06839 1073 aa3.92□□□□□ -1.78
MSH2YOL090W YOR093CQ12275 1648 aa3.92□□□□□ -1.78
MSH2YOL090W CDC11P32458 415 aa3.92□□□□□ -1.78
MSH2YOL090W GRX7P38068 203 aa3.92□□□□□ -1.78
MSH2YOL090W YHR020WP38708 688 aaKnown RBP3.92□□□□□ -1.78
MSH2YOL090W LSO1Q3E827 93 aa3.92□□□□□ -1.78
MSH2YOL090W RAD2P07276 1031 aa3.92□□□□□ -1.78
MSH2YOL090W VPS24P36095 224 aaKnown RBP3.92□□□□□ -1.78
MSH2YOL090W RPA14P50106 137 aa3.92□□□□□ -1.78
MSH2YOL090W TMA64Q04600 565 aaKnown RBP3.92□□□□□ -1.78
MSH2YOL090W THS1P04801 734 aaKnown RBP3.91□□□□□ -1.78
MSH2YOL090W HAP4P14064 554 aa3.91□□□□□ -1.78
MSH2YOL090W CLN2P20438 545 aa3.91□□□□□ -1.78
MSH2YOL090W TRX2P22803 104 aaKnown RBP3.91□□□□□ -1.78
MSH2YOL090W PEX8P53248 589 aa3.91□□□□□ -1.78
MSH2YOL090W BNI4P53858 892 aa3.91□□□□□ -1.78
MSH2YOL090W TRS120Q04183 1289 aa3.91□□□□□ -1.78
MSH2YOL090W YPK9Q12697 1472 aa3.91□□□□□ -1.78
MSH2YOL090W DNF2Q12675 1612 aa3.91□□□□□ -1.78
MSH2YOL090W PWP2P25635 923 aaKnown RBP3.91□□□□□ -1.78
MSH2YOL090W TOA1P32773 286 aa3.91□□□□□ -1.78
MSH2YOL090W SAP30P38429 201 aa3.91□□□□□ -1.78
MSH2YOL090W RTT106P40161 455 aa3.91□□□□□ -1.78
MSH2YOL090W RMD1Q03441 430 aa3.91□□□□□ -1.78
MSH2YOL090W YOR131CQ12486 218 aa3.91□□□□□ -1.78
MSH2YOL090W CYC8P14922 966 aa3.9□□□□□ -1.78
MSH2YOL090W MSH4P40965 878 aaPredicted RBP3.9□□□□□ -1.78
MSH2YOL090W YOR378WQ08902 515 aa3.9□□□□□ -1.78
MSH2YOL090W NKP1Q12493 238 aa3.9□□□□□ -1.78
MSH2YOL090W VAC17P25591 423 aa3.9□□□□□ -1.79
MSH2YOL090W RAD27P26793 382 aa3.9□□□□□ -1.79
MSH2YOL090W PAF1P38351 445 aa3.9□□□□□ -1.79
MSH2YOL090W COG4Q06096 861 aa3.9□□□□□ -1.79
MSH2YOL090W BUD31P25337 157 aaPredicted RBP3.89□□□□□ -1.79
MSH2YOL090W CRP1P38845 465 aaKnown RBP3.89□□□□□ -1.79
MSH2YOL090W POL5P39985 1022 aaKnown RBP3.89□□□□□ -1.79
MSH2YOL090W YFR016CP43597 1233 aaKnown RBP3.89□□□□□ -1.79
MSH2YOL090W YNR029CP53729 429 aaKnown RBP3.89□□□□□ -1.79
MSH2YOL090W UTP14Q04500 899 aaKnown RBP3.89□□□□□ -1.79
MSH2YOL090W GAS4Q08271 471 aa3.89□□□□□ -1.79
MSH2YOL090W TSC13Q99190 310 aa3.89□□□□□ -1.79
MSH2YOL090W PHO8P11491 566 aa3.88□□□□□ -1.79
MSH2YOL090W RAD4P14736 754 aa3.88□□□□□ -1.79
MSH2YOL090W PDI1P17967 522 aaKnown RBP3.88□□□□□ -1.79
MSH2YOL090W TPD3P31383 635 aa3.88□□□□□ -1.79
MSH2YOL090W PEP7P32609 515 aa3.88□□□□□ -1.79
MSH2YOL090W NFU1P32860 256 aa3.88□□□□□ -1.79
MSH2YOL090W IXR1P33417 597 aa3.88□□□□□ -1.79
MSH2YOL090W TAF2P23255 1407 aa3.88□□□□□ -1.79
MSH2YOL090W RPP1BP10622 106 aaKnown RBP3.88□□□□□ -1.79
MSH2YOL090W YKL069WP36088 180 aa3.88□□□□□ -1.79
MSH2YOL090W SOH1P38633 127 aa3.88□□□□□ -1.79
MSH2YOL090W YGR122WP53272 402 aa3.88□□□□□ -1.79
MSH2YOL090W GDE1Q02979 1223 aa3.88□□□□□ -1.79
MSH2YOL090W NAB6Q03735 1134 aaKnown RBP RIP-Chip data3.88□□□□□ -1.79not detected
MSH2YOL090W YML082WQ04533 649 aaKnown RBP3.88□□□□□ -1.79
MSH2YOL090W ERR1P0CX10 437 aa3.88□□□□□ -1.79
MSH2YOL090W ERR2P0CX11 437 aa3.88□□□□□ -1.79
MSH2YOL090W SRM1P21827 482 aa3.88□□□□□ -1.79
MSH2YOL090W GCD11P32481 527 aaKnown RBP3.88□□□□□ -1.79
MSH2YOL090W PET112P33893 541 aa3.88□□□□□ -1.79
MSH2YOL090W RRN7P40992 514 aa3.88□□□□□ -1.79
MSH2YOL090W HXT10P43581 546 aa3.88□□□□□ -1.79
MSH2YOL090W FAA4P47912 694 aaKnown RBP3.88□□□□□ -1.79
MSH2YOL090W ELP4Q02884 456 aaKnown RBP3.88□□□□□ -1.79
MSH2YOL090W CEF1Q03654 590 aaPredicted RBP3.88□□□□□ -1.79
MSH2YOL090W CHD1P32657 1468 aa3.88□□□□□ -1.79
MSH2YOL090W SCC2Q04002 1493 aa3.87□□□□□ -1.79
MSH2YOL090W MNR2P35724 969 aa3.87□□□□□ -1.79
MSH2YOL090W MNN4P36044 1178 aa3.87□□□□□ -1.79
MSH2YOL090W TY2B-LR1P0C2J3 1770 aa3.87□□□□□ -1.79
MSH2YOL090W TY2B-FP0CX63 1770 aa3.87□□□□□ -1.79
MSH2YOL090W TY2B-GR2P0CX64 1770 aa3.87□□□□□ -1.79
MSH2YOL090W TY2B-CP25384 1770 aa3.87□□□□□ -1.79
MSH2YOL090W TY2B-DR2Q03494 1770 aa3.87□□□□□ -1.79
MSH2YOL090W TY1B-DR1Q03855 1755 aa3.87□□□□□ -1.79
MSH2YOL090W TY2B-DR3Q07791 1770 aaKnown RBP3.87□□□□□ -1.79
MSH2YOL090W TY2B-OR1Q12113 1770 aa3.87□□□□□ -1.79
MSH2YOL090W TY2B-DR1Q12472 1770 aa3.87□□□□□ -1.79
Retrieved 100 of 5,963 RNA–protein pairs in 33.7 ms