RNA–Protein interactions for RNA: ENST00000641746.1

CASC19-256, Transcript of cancer susceptibility 19, human

Gene CASC19, Length 958 nt, Biotype lincRNA.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CASC19-256	ENST00000641746	FAM160A2	Q8N612	972 aa	Predicted RBP	10.62	□□□□□ -0.71
CASC19-256	ENST00000641746	FCF1	Q9Y324	198 aa	Known RBP	10.62	□□□□□ -0.71
CASC19-256	ENST00000641746	DAXX	Q9UER7	740 aa	Predicted RBP	10.61	□□□□□ -0.71
CASC19-256	ENST00000641746	WDR62	O43379	1518 aa		10.6	□□□□□ -0.71
CASC19-256	ENST00000641746	CYP4X1	Q8N118	509 aa		10.6	□□□□□ -0.71
CASC19-256	ENST00000641746	AXIN1	O15169	862 aa		10.59	□□□□□ -0.71
CASC19-256	ENST00000641746	ATP6V1A	P38606	617 aa		10.59	□□□□□ -0.71
CASC19-256	ENST00000641746	SMCP	P49901	116 aa	Predicted RBP	10.59	□□□□□ -0.71
CASC19-256	ENST00000641746	FUT2	Q10981	343 aa		10.59	□□□□□ -0.71
CASC19-256	ENST00000641746	GMPR2	Q9P2T1	348 aa	Known RBP	10.59	□□□□□ -0.71
CASC19-256	ENST00000641746	HMGXB3	Q12766	1538 aa		10.58	□□□□□ -0.72
CASC19-256	ENST00000641746	ARAP1	Q96P48	1450 aa		10.58	□□□□□ -0.72
CASC19-256	ENST00000641746	CTC1	Q2NKJ3	1217 aa		10.58	□□□□□ -0.72
CASC19-256	ENST00000641746	SLC27A5	Q9Y2P5	690 aa		10.58	□□□□□ -0.72
CASC19-256	ENST00000641746	C11orf95	C9JLR9	678 aa	Predicted RBP	10.57	□□□□□ -0.72
CASC19-256	ENST00000641746	WFS1	O76024	890 aa		10.57	□□□□□ -0.72
CASC19-256	ENST00000641746	FMNL1	O95466	1100 aa	Predicted RBP	10.57	□□□□□ -0.72
CASC19-256	ENST00000641746	RDH13	Q8NBN7	331 aa		10.57	□□□□□ -0.72
CASC19-256	ENST00000641746	SALL2	Q9Y467	1007 aa	Predicted RBP	10.57	□□□□□ -0.72
CASC19-256	ENST00000641746	FECH	P22830	423 aa		10.56	□□□□□ -0.72
CASC19-256	ENST00000641746	BRICD5	Q6PL45	260 aa		10.55	□□□□□ -0.72
CASC19-256	ENST00000641746	DDX11L8	A8MPP1	907 aa		10.54	□□□□□ -0.72
CASC19-256	ENST00000641746	GCGR	P47871	477 aa		10.54	□□□□□ -0.72
CASC19-256	ENST00000641746	P3H3	Q8IVL6	736 aa		10.54	□□□□□ -0.72
CASC19-256	ENST00000641746	GNPAT	O15228	680 aa		10.53	□□□□□ -0.72
CASC19-256	ENST00000641746	NFX1	Q12986	1120 aa	Known RBP	10.53	□□□□□ -0.72
CASC19-256	ENST00000641746	RBM26	Q5T8P6	1007 aa	Known RBP	10.52	□□□□□ -0.73
CASC19-256	ENST00000641746	PRDM9	Q9NQV7	894 aa		10.52	□□□□□ -0.73
CASC19-256	ENST00000641746	BAZ1B	Q9UIG0	1483 aa	Known RBP	10.51	□□□□□ -0.73
CASC19-256	ENST00000641746	TTC24	A2A3L6	582 aa	Predicted RBP	10.51	□□□□□ -0.73
CASC19-256	ENST00000641746	NLRP7	Q8WX94	980 aa		10.51	□□□□□ -0.73
CASC19-256	ENST00000641746	TESPA1	A2RU30	521 aa	Predicted RBP	10.5	□□□□□ -0.73
CASC19-256	ENST00000641746	ZBTB24	O43167	697 aa	Predicted RBP	10.5	□□□□□ -0.73
CASC19-256	ENST00000641746	MSS51	Q4VC12	460 aa		10.5	□□□□□ -0.73
CASC19-256	ENST00000641746	WNT7A	O00755	349 aa		10.49	□□□□□ -0.73
CASC19-256	ENST00000641746	GPR37	O15354	613 aa		10.49	□□□□□ -0.73
CASC19-256	ENST00000641746	SMPD1	P17405	629 aa		10.49	□□□□□ -0.73
CASC19-256	ENST00000641746	PHOX2B	Q99453	314 aa		10.49	□□□□□ -0.73
CASC19-256	ENST00000641746	CADPS	Q9ULU8	1353 aa		10.49	□□□□□ -0.73
CASC19-256	ENST00000641746	WIPF1	O43516	503 aa		10.48	□□□□□ -0.73
CASC19-256	ENST00000641746	RNF19B	Q6ZMZ0	732 aa		10.48	□□□□□ -0.73
CASC19-256	ENST00000641746	SULF1	Q8IWU6	871 aa		10.48	□□□□□ -0.73
CASC19-256	ENST00000641746	SNIP1	Q8TAD8	396 aa	Known RBP	10.48	□□□□□ -0.73
CASC19-256	ENST00000641746	STK17A	Q9UEE5	414 aa		10.46	□□□□□ -0.73
CASC19-256	ENST00000641746	SMYD5	Q6GMV2	418 aa		10.45	□□□□□ -0.74
CASC19-256	ENST00000641746	ATP13A2	Q9NQ11	1180 aa		10.45	□□□□□ -0.74
CASC19-256	ENST00000641746	SNRPB	P14678	240 aa	Known RBP	10.44	□□□□□ -0.74
CASC19-256	ENST00000641746		J3QL48	77 aa		10.43	□□□□□ -0.74
CASC19-256	ENST00000641746	MMP16	P51512	607 aa		10.43	□□□□□ -0.74
CASC19-256	ENST00000641746	TRIM32	Q13049	653 aa		10.43	□□□□□ -0.74
CASC19-256	ENST00000641746	GRIPAP1	Q4V328	841 aa		10.43	□□□□□ -0.74
CASC19-256	ENST00000641746	LCE2C	Q5TA81	110 aa		10.43	□□□□□ -0.74
CASC19-256	ENST00000641746	CEP164	Q9UPV0	1460 aa		10.42	□□□□□ -0.74
CASC19-256	ENST00000641746	INSM1	Q01101	510 aa	Predicted RBP	10.42	□□□□□ -0.74
CASC19-256	ENST00000641746	MRGPRX2	Q96LB1	330 aa		10.42	□□□□□ -0.74
CASC19-256	ENST00000641746	FBXO41	Q8TF61	875 aa		10.41	□□□□□ -0.74
CASC19-256	ENST00000641746	TRIM47	Q96LD4	638 aa		10.41	□□□□□ -0.74
CASC19-256	ENST00000641746	TERT	O14746	1132 aa	Known RBP	10.4	□□□□□ -0.74
CASC19-256	ENST00000641746		Q3C1V9	767 aa		10.4	□□□□□ -0.74
CASC19-256	ENST00000641746	LMTK3	Q96Q04	1460 aa		10.4	□□□□□ -0.74
CASC19-256	ENST00000641746	SENP2	Q9HC62	589 aa		10.39	□□□□□ -0.75
CASC19-256	ENST00000641746	SOCS7	O14512	581 aa		10.38	□□□□□ -0.75
CASC19-256	ENST00000641746	HPS1	Q92902	700 aa		10.38	□□□□□ -0.75
CASC19-256	ENST00000641746	RSF1	Q96T23	1441 aa	Predicted RBP	10.38	□□□□□ -0.75
CASC19-256	ENST00000641746	DXO	O77932	396 aa	Known RBP	10.37	□□□□□ -0.75
CASC19-256	ENST00000641746	USB1	Q9BQ65	265 aa	Known RBP	10.37	□□□□□ -0.75
CASC19-256	ENST00000641746	SMARCA4	P51532	1647 aa		10.36	□□□□□ -0.75
CASC19-256	ENST00000641746	ZNF608	Q9ULD9	1512 aa	Predicted RBP	10.36	□□□□□ -0.75
CASC19-256	ENST00000641746	CD46	P15529	392 aa		10.35	□□□□□ -0.75
CASC19-256	ENST00000641746	RC3H1	Q5TC82	1133 aa	Known RBP	10.35	□□□□□ -0.75
CASC19-256	ENST00000641746	REPIN1	Q9BWE0	567 aa	Known RBP	10.35	□□□□□ -0.75
CASC19-256	ENST00000641746	FANCD2	Q9BXW9	1451 aa		10.35	□□□□□ -0.75
CASC19-256	ENST00000641746	SKOR1	P84550	965 aa		10.34	□□□□□ -0.75
CASC19-256	ENST00000641746	KIFC2	Q96AC6	838 aa		10.33	□□□□□ -0.76
CASC19-256	ENST00000641746	SLC24A1	O60721	1099 aa		10.32	□□□□□ -0.76
CASC19-256	ENST00000641746	KDM4A	O75164	1064 aa		10.32	□□□□□ -0.76
CASC19-256	ENST00000641746	WNT7B	P56706	349 aa		10.31	□□□□□ -0.76
CASC19-256	ENST00000641746	ILDR2	Q71H61	639 aa		10.31	□□□□□ -0.76
CASC19-256	ENST00000641746	URB2	Q14146	1524 aa	Known RBP	10.3	□□□□□ -0.76
CASC19-256	ENST00000641746	CCDC24	Q8N4L8	307 aa		10.3	□□□□□ -0.76
CASC19-256	ENST00000641746	GPIHBP1	Q8IV16	184 aa		10.28	□□□□□ -0.76
CASC19-256	ENST00000641746	HLA-C	Q95604	372 aa		10.28	□□□□□ -0.76
CASC19-256	ENST00000641746	USP46	P62068	366 aa		10.27	□□□□□ -0.77
CASC19-256	ENST00000641746	SIAH2	O43255	324 aa		10.26	□□□□□ -0.77
CASC19-256	ENST00000641746	IFT140	Q96RY7	1462 aa		10.25	□□□□□ -0.77
CASC19-256	ENST00000641746	ALDH1A1	P00352	501 aa		10.25	□□□□□ -0.77
CASC19-256	ENST00000641746	ERCC6L2	Q5T890	1561 aa		10.25	□□□□□ -0.77
CASC19-256	ENST00000641746	SLC16A10	Q8TF71	515 aa		10.24	□□□□□ -0.77
CASC19-256	ENST00000641746	NXF1	Q9UBU9	619 aa	Known RBP	10.24	□□□□□ -0.77
CASC19-256	ENST00000641746	PEG3	Q9GZU2	1588 aa		10.23	□□□□□ -0.77
CASC19-256	ENST00000641746	HOXA2	O43364	376 aa		10.23	□□□□□ -0.77
CASC19-256	ENST00000641746	CHD1	O14646	1710 aa		10.22	□□□□□ -0.77
CASC19-256	ENST00000641746	IRF6	O14896	467 aa		10.22	□□□□□ -0.77
CASC19-256	ENST00000641746	JUND	P17535	347 aa		10.22	□□□□□ -0.77
CASC19-256	ENST00000641746	LOR	P23490	312 aa	Predicted RBP	10.22	□□□□□ -0.77
CASC19-256	ENST00000641746	MAP2K5	Q13163	448 aa		10.22	□□□□□ -0.77
CASC19-256	ENST00000641746	PTCRA	Q6ISU1	281 aa	Predicted RBP	10.22	□□□□□ -0.77
CASC19-256	ENST00000641746	MDM2	Q00987	491 aa	Predicted RBP	10.21	□□□□□ -0.77
CASC19-256	ENST00000641746	TRIM46	Q7Z4K8	759 aa		10.21	□□□□□ -0.77
CASC19-256	ENST00000641746	SYMPK	Q92797	1274 aa	Known RBP	10.21	□□□□□ -0.77

Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms