RNA–Protein interactions for RNA: ENST00000641635.1

SAMMSON-219, survival associated mitochondrial melanoma specific oncogenic non-coding RNA, humanhuman

Gene SAMMSON, Length 1,162 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAMMSON-219ENST00000641635 PATL2C9JE40 543 aaKnown RBP9.97□□□□□ -0.81
SAMMSON-219ENST00000641635 IRF5Q13568 498 aa9.97□□□□□ -0.81
SAMMSON-219ENST00000641635 BARGINQ6ZT62 677 aa9.97□□□□□ -0.81
SAMMSON-219ENST00000641635 MYH16Q9H6N6 1097 aa9.97□□□□□ -0.81
SAMMSON-219ENST00000641635 SNAPC4Q5SXM2 1469 aa9.97□□□□□ -0.81
SAMMSON-219ENST00000641635 MARCH6O60337 910 aa9.96□□□□□ -0.82
SAMMSON-219ENST00000641635 FOXD4L6Q3SYB3 417 aaPredicted RBP9.96□□□□□ -0.82
SAMMSON-219ENST00000641635 FOXD4L3Q6VB84 417 aaPredicted RBP9.96□□□□□ -0.82
SAMMSON-219ENST00000641635 ZNF622Q969S3 477 aaKnown RBP eCLIP9.96□□□□□ -0.82
SAMMSON-219ENST00000641635 RNF166Q96A37 237 aaPredicted RBP9.96□□□□□ -0.82
SAMMSON-219ENST00000641635 IGSF5Q9NSI5 407 aa9.96□□□□□ -0.82
SAMMSON-219ENST00000641635 PTPRMP28827 1452 aa9.96□□□□□ -0.82
SAMMSON-219ENST00000641635 TPD52L2O43399 206 aaKnown RBP9.95□□□□□ -0.82
SAMMSON-219ENST00000641635 MAP3K9P80192 1104 aa9.95□□□□□ -0.82
SAMMSON-219ENST00000641635 AMOTL2Q9Y2J4 779 aa9.95□□□□□ -0.82
SAMMSON-219ENST00000641635 CFTRP13569 1480 aa9.95□□□□□ -0.82
SAMMSON-219ENST00000641635 MAPKBP1O60336 1514 aa9.94□□□□□ -0.82
SAMMSON-219ENST00000641635 COL17A1Q9UMD9 1497 aaPredicted RBP9.94□□□□□ -0.82
SAMMSON-219ENST00000641635 RTL5Q5HYW3 569 aaPredicted RBP9.94□□□□□ -0.82
SAMMSON-219ENST00000641635 PEG3Q9GZU2 1588 aa9.93□□□□□ -0.82
SAMMSON-219ENST00000641635 ZC3H4Q9UPT8 1303 aaKnown RBP9.93□□□□□ -0.82
SAMMSON-219ENST00000641635 NUDT7P0C024 238 aa9.93□□□□□ -0.82
SAMMSON-219ENST00000641635 RETREG2Q8NC44 543 aa9.93□□□□□ -0.82
SAMMSON-219ENST00000641635 PPME1Q9Y570 386 aa9.93□□□□□ -0.82
SAMMSON-219ENST00000641635 TSPOAP1O95153 1857 aa9.93□□□□□ -0.82
SAMMSON-219ENST00000641635 SRCAPQ6ZRS2 3230 aa9.93□□□□□ -0.82
SAMMSON-219ENST00000641635 DPYSL4O14531 572 aa9.92□□□□□ -0.82
SAMMSON-219ENST00000641635 ANKRD13DQ6ZTN6 518 aa9.92□□□□□ -0.82
SAMMSON-219ENST00000641635 STAC3Q96MF2 364 aa9.92□□□□□ -0.82
SAMMSON-219ENST00000641635 TERF2IPQ9NYB0 399 aa9.92□□□□□ -0.82
SAMMSON-219ENST00000641635 MED1Q15648 1581 aaPredicted RBP9.92□□□□□ -0.82
SAMMSON-219ENST00000641635 PTGER2P43116 358 aa9.91□□□□□ -0.82
SAMMSON-219ENST00000641635 MMP14P50281 582 aa9.91□□□□□ -0.82
SAMMSON-219ENST00000641635 PDIA6Q15084 440 aa9.91□□□□□ -0.82
SAMMSON-219ENST00000641635 NME8Q8N427 588 aa9.91□□□□□ -0.82
SAMMSON-219ENST00000641635 SUGT1Q9Y2Z0 365 aa9.91□□□□□ -0.82
SAMMSON-219ENST00000641635 TDRD9Q8NDG6 1382 aaKnown RBP9.9□□□□□ -0.82
SAMMSON-219ENST00000641635 TESPA1A2RU30 521 aaPredicted RBP9.9□□□□□ -0.82
SAMMSON-219ENST00000641635 UNCXA6NJT0 531 aa9.9□□□□□ -0.82
SAMMSON-219ENST00000641635 CNGB1Q14028 1251 aaPredicted RBP9.9□□□□□ -0.82
SAMMSON-219ENST00000641635 GORABQ5T7V8 394 aa9.9□□□□□ -0.82
SAMMSON-219ENST00000641635 IL27Q8NEV9 243 aa9.9□□□□□ -0.82
SAMMSON-219ENST00000641635 UBAP1LF5GYI3 381 aa9.89□□□□□ -0.83
SAMMSON-219ENST00000641635 TRAK2O60296 914 aa9.89□□□□□ -0.83
SAMMSON-219ENST00000641635 SLC52A1Q9NWF4 448 aa9.89□□□□□ -0.83
SAMMSON-219ENST00000641635 RBM27Q9P2N5 1060 aaKnown RBP9.89□□□□□ -0.83
SAMMSON-219ENST00000641635 SEMA3EO15041 775 aa9.88□□□□□ -0.83
SAMMSON-219ENST00000641635 EVI5O60447 810 aa9.88□□□□□ -0.83
SAMMSON-219ENST00000641635 LHX6Q9UPM6 363 aa9.88□□□□□ -0.83
SAMMSON-219ENST00000641635 LSM11P83369 360 aaKnown RBP eCLIP9.87□□□□□ -0.83
SAMMSON-219ENST00000641635 APBB1IPQ7Z5R6 666 aaPredicted RBP9.87□□□□□ -0.83
SAMMSON-219ENST00000641635 PBX2P40425 430 aa9.86□□□□□ -0.83
SAMMSON-219ENST00000641635 RALBP1Q15311 655 aa9.86□□□□□ -0.83
SAMMSON-219ENST00000641635 TSHZ1Q6ZSZ6 1077 aa9.86□□□□□ -0.83
SAMMSON-219ENST00000641635 TOPBP1Q92547 1522 aa9.86□□□□□ -0.83
SAMMSON-219ENST00000641635 MROH2BQ7Z745 1585 aa9.85□□□□□ -0.83
SAMMSON-219ENST00000641635 ANKRD62A6NC57 917 aa9.85□□□□□ -0.83
SAMMSON-219ENST00000641635 AXDND1Q5T1B0 1012 aaPredicted RBP9.85□□□□□ -0.83
SAMMSON-219ENST00000641635 RINLQ6ZS11 566 aa9.85□□□□□ -0.83
SAMMSON-219ENST00000641635 GPBP1L1Q9HC44 474 aaPredicted RBP9.85□□□□□ -0.83
SAMMSON-219ENST00000641635 MAGI1Q96QZ7 1491 aaPredicted RBP9.85□□□□□ -0.83
SAMMSON-219ENST00000641635 TTC36A6NLP5 189 aa9.84□□□□□ -0.83
SAMMSON-219ENST00000641635 HSPA1LP34931 641 aa9.84□□□□□ -0.83
SAMMSON-219ENST00000641635 ERCC3P19447 782 aa9.83□□□□□ -0.84
SAMMSON-219ENST00000641635 MYBPC2Q14324 1141 aa9.83□□□□□ -0.84
SAMMSON-219ENST00000641635 NBPF11Q86T75 865 aa9.83□□□□□ -0.84
SAMMSON-219ENST00000641635 SIRT1Q96EB6 747 aa9.83□□□□□ -0.84
SAMMSON-219ENST00000641635 RBM26Q5T8P6 1007 aaKnown RBP9.82□□□□□ -0.84
SAMMSON-219ENST00000641635 HIRIP3Q9BW71 556 aaPredicted RBP9.82□□□□□ -0.84
SAMMSON-219ENST00000641635 IQSEC2Q5JU85 1478 aa9.81□□□□□ -0.84
SAMMSON-219ENST00000641635 PSDA5PKW4 1024 aaPredicted RBP9.81□□□□□ -0.84
SAMMSON-219ENST00000641635 A6NJR5 290 aa9.81□□□□□ -0.84
SAMMSON-219ENST00000641635 MCCD1P59942 119 aaPredicted RBP9.81□□□□□ -0.84
SAMMSON-219ENST00000641635 MICAL1Q8TDZ2 1067 aa9.81□□□□□ -0.84
SAMMSON-219ENST00000641635 CLUAP1Q96AJ1 413 aa9.81□□□□□ -0.84
SAMMSON-219ENST00000641635 AXIN2Q9Y2T1 843 aa9.81□□□□□ -0.84
SAMMSON-219ENST00000641635 ABCC8Q09428 1581 aa9.8□□□□□ -0.84
SAMMSON-219ENST00000641635 NBPF1Q3BBV0 1214 aa9.8□□□□□ -0.84
SAMMSON-219ENST00000641635 MTA3Q9BTC8 594 aa9.8□□□□□ -0.84
SAMMSON-219ENST00000641635 TARBP1Q13395 1621 aaKnown RBP9.79□□□□□ -0.84
SAMMSON-219ENST00000641635 RPS6KL1Q9Y6S9 549 aa9.79□□□□□ -0.84
SAMMSON-219ENST00000641635 FLIIQ13045 1269 aa9.78□□□□□ -0.84
SAMMSON-219ENST00000641635 NBPF20Q3BBV1 942 aa9.78□□□□□ -0.84
SAMMSON-219ENST00000641635 EVI5LQ96CN4 794 aa9.78□□□□□ -0.84
SAMMSON-219ENST00000641635 JPH4Q96JJ6 628 aa9.78□□□□□ -0.84
SAMMSON-219ENST00000641635 RGS17Q9UGC6 210 aaPredicted RBP9.78□□□□□ -0.84
SAMMSON-219ENST00000641635 CEP170Q5SW79 1584 aa9.78□□□□□ -0.84
SAMMSON-219ENST00000641635 PTPRTO14522 1441 aa9.77□□□□□ -0.85
SAMMSON-219ENST00000641635 YEATS2Q9ULM3 1422 aa9.77□□□□□ -0.85
SAMMSON-219ENST00000641635 FOXD4Q12950 439 aaPredicted RBP9.77□□□□□ -0.85
SAMMSON-219ENST00000641635 NEUROD1Q13562 356 aa9.77□□□□□ -0.85
SAMMSON-219ENST00000641635 CCDC96Q2M329 555 aa9.77□□□□□ -0.85
SAMMSON-219ENST00000641635 CDCA8Q53HL2 280 aa9.77□□□□□ -0.85
SAMMSON-219ENST00000641635 POTEEQ6S8J3 1075 aa9.77□□□□□ -0.85
SAMMSON-219ENST00000641635 SDR16C5Q8N3Y7 309 aa9.77□□□□□ -0.85
SAMMSON-219ENST00000641635 ABCF1Q8NE71 845 aaKnown RBP eCLIP9.77□□□□□ -0.85
SAMMSON-219ENST00000641635 ARHGAP33O14559 1287 aa9.76□□□□□ -0.85
SAMMSON-219ENST00000641635 FOSBP53539 338 aa9.76□□□□□ -0.85
SAMMSON-219ENST00000641635 CASC1Q6TDU7 716 aa9.76□□□□□ -0.85
SAMMSON-219ENST00000641635 CEP120Q8N960 986 aa9.76□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms