RNA–Protein interactions for RNA: ENST00000641597.1

PHGDH-223, Transcript of phosphoglycerate dehydrogenase, humanhuman

APPRIS P1 BASIC

Gene PHGDH, Length 2,585 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-223ENST00000641597 SIGLEC1Q9BZZ2 1709 aa21.92■■□□□ 1.1
PHGDH-223ENST00000641597 MYO3AQ8NEV4 1616 aa21.92■■□□□ 1.1
PHGDH-223ENST00000641597 BCL2L13Q9BXK5 485 aa21.92■■□□□ 1.1
PHGDH-223ENST00000641597 IGHDP01880 384 aa21.91■■□□□ 1.1
PHGDH-223ENST00000641597 GOLGA6L2Q8N9W4 650 aaPredicted RBP21.91■■□□□ 1.1
PHGDH-223ENST00000641597 SBNO2Q9Y2G9 1366 aa21.91■■□□□ 1.1
PHGDH-223ENST00000641597 FRAT1Q92837 279 aaPredicted RBP21.91■■□□□ 1.1
PHGDH-223ENST00000641597 TCP11L2Q8N4U5 519 aa21.9■■□□□ 1.1
PHGDH-223ENST00000641597 COG6Q9Y2V7 657 aa21.9■■□□□ 1.1
PHGDH-223ENST00000641597 POLR3AO14802 1390 aaPredicted RBP21.9■■□□□ 1.1
PHGDH-223ENST00000641597 ABCC3O15438 1527 aa21.89■■□□□ 1.09
PHGDH-223ENST00000641597 C8orf34Q49A92 452 aa21.88■■□□□ 1.09
PHGDH-223ENST00000641597 SHPRHQ149N8 1683 aa21.88■■□□□ 1.09
PHGDH-223ENST00000641597 HECW2Q9P2P5 1572 aa21.88■■□□□ 1.09
PHGDH-223ENST00000641597 IDI1Q13907 227 aa21.88■■□□□ 1.09
PHGDH-223ENST00000641597 MLH3Q9UHC1 1453 aa21.87■■□□□ 1.09
PHGDH-223ENST00000641597 SETBP1Q9Y6X0 1596 aa21.87■■□□□ 1.09
PHGDH-223ENST00000641597 ZC3H13Q5T200 1668 aaKnown RBP21.86■■□□□ 1.09
PHGDH-223ENST00000641597 SLC24A1O60721 1099 aa21.86■■□□□ 1.09
PHGDH-223ENST00000641597 CANXP27824 592 aaKnown RBP21.85■■□□□ 1.09
PHGDH-223ENST00000641597 RTL5Q5HYW3 569 aaPredicted RBP21.84■■□□□ 1.09
PHGDH-223ENST00000641597 GLI2P10070 1586 aa21.83■■□□□ 1.09
PHGDH-223ENST00000641597 TULP4Q9NRJ4 1543 aa21.83■■□□□ 1.08
PHGDH-223ENST00000641597 RUNDC1Q96C34 613 aa21.83■■□□□ 1.08
PHGDH-223ENST00000641597 RLBP1P12271 317 aa21.82■■□□□ 1.08
PHGDH-223ENST00000641597 CGNL1Q0VF96 1302 aa21.82■■□□□ 1.08
PHGDH-223ENST00000641597 NEFMP07197 916 aa21.82■■□□□ 1.08
PHGDH-223ENST00000641597 CLUAP1Q96AJ1 413 aa21.82■■□□□ 1.08
PHGDH-223ENST00000641597 CAMSAP1Q5T5Y3 1602 aa21.81■■□□□ 1.08
PHGDH-223ENST00000641597 GGNBP2Q9H3C7 697 aa21.81■■□□□ 1.08
PHGDH-223ENST00000641597 YEATS2Q9ULM3 1422 aa21.81■■□□□ 1.08
PHGDH-223ENST00000641597 U2AF1L5P0DN76 240 aaPredicted RBP21.81■■□□□ 1.08
PHGDH-223ENST00000641597 U2AF1Q01081 240 aaKnown RBP eCLIP21.81■■□□□ 1.08
PHGDH-223ENST00000641597 FAM161AQ3B820 660 aa21.8■■□□□ 1.08
PHGDH-223ENST00000641597 MINK1Q8N4C8 1332 aaPredicted RBP21.79■■□□□ 1.08
PHGDH-223ENST00000641597 FBXO31Q5XUX0 539 aaPredicted RBP21.79■■□□□ 1.08
PHGDH-223ENST00000641597 EVC2Q86UK5 1308 aa21.79■■□□□ 1.08
PHGDH-223ENST00000641597 VGFO15240 615 aaPredicted RBP21.79■■□□□ 1.08
PHGDH-223ENST00000641597 SRPK2P78362 688 aaKnown RBP21.79■■□□□ 1.08
PHGDH-223ENST00000641597 NEXMIFQ5QGS0 1516 aa21.78■■□□□ 1.08
PHGDH-223ENST00000641597 RARSP54136 660 aaKnown RBP21.78■■□□□ 1.08
PHGDH-223ENST00000641597 RPGRIP1LQ68CZ1 1315 aa21.78■■□□□ 1.08
PHGDH-223ENST00000641597 ARHGEF28Q8N1W1 1705 aaKnown RBP21.77■■□□□ 1.08
PHGDH-223ENST00000641597 IQSEC2Q5JU85 1478 aa21.76■■□□□ 1.07
PHGDH-223ENST00000641597 TSR2Q969E8 191 aaKnown RBP21.76■■□□□ 1.07
PHGDH-223ENST00000641597 DIP2CQ9Y2E4 1556 aa21.75■■□□□ 1.07
PHGDH-223ENST00000641597 FBLN1P23142 703 aa21.75■■□□□ 1.07
PHGDH-223ENST00000641597 A0A1W2PP64 1363 aa21.75■■□□□ 1.07
PHGDH-223ENST00000641597 MYO5BQ9ULV0 1848 aa21.75■■□□□ 1.07
PHGDH-223ENST00000641597 PHF23Q9BUL5 403 aaPredicted RBP21.75■■□□□ 1.07
PHGDH-223ENST00000641597 U2SURPO15042 1029 aaKnown RBP21.74■■□□□ 1.07
PHGDH-223ENST00000641597 SEC24BO95487 1268 aa21.74■■□□□ 1.07
PHGDH-223ENST00000641597 PCDHB15Q9Y5E8 787 aa21.74■■□□□ 1.07
PHGDH-223ENST00000641597 ANKRD36BQ8N2N9 1353 aa21.74■■□□□ 1.07
PHGDH-223ENST00000641597 PDE3AQ14432 1141 aa21.73■■□□□ 1.07
PHGDH-223ENST00000641597 PRAM1Q96QH2 718 aa21.73■■□□□ 1.07
PHGDH-223ENST00000641597 CFAP53Q96M91 514 aa21.73■■□□□ 1.07
PHGDH-223ENST00000641597 CFAP74Q9C0B2 1584 aa21.73■■□□□ 1.07
PHGDH-223ENST00000641597 PIK3C2BO00750 1634 aa21.72■■□□□ 1.07
PHGDH-223ENST00000641597 NGEFQ8N5V2 710 aa21.69■■□□□ 1.06
PHGDH-223ENST00000641597 DDRGK1Q96HY6 314 aa21.68■■□□□ 1.06
PHGDH-223ENST00000641597 FYB1O15117 783 aa21.67■■□□□ 1.06
PHGDH-223ENST00000641597 CYB5RLQ6IPT4 315 aa21.67■■□□□ 1.06
PHGDH-223ENST00000641597 POGKQ9P215 609 aa21.67■■□□□ 1.06
PHGDH-223ENST00000641597 WDR63Q8IWG1 891 aa21.67■■□□□ 1.06
PHGDH-223ENST00000641597 NEO1Q92859 1461 aa21.65■■□□□ 1.06
PHGDH-223ENST00000641597 USP32Q8NFA0 1604 aa21.65■■□□□ 1.06
PHGDH-223ENST00000641597 USP19O94966 1318 aa21.65■■□□□ 1.06
PHGDH-223ENST00000641597 RICTORQ6R327 1708 aa21.64■■□□□ 1.05
PHGDH-223ENST00000641597 EXOSC9Q06265 439 aaKnown RBP21.63■■□□□ 1.05
PHGDH-223ENST00000641597 PTPRMP28827 1452 aa21.63■■□□□ 1.05
PHGDH-223ENST00000641597 ABCC11Q96J66 1382 aa21.63■■□□□ 1.05
PHGDH-223ENST00000641597 PPM1GO15355 546 aaPredicted RBP21.63■■□□□ 1.05
PHGDH-223ENST00000641597 WAPLQ7Z5K2 1190 aa21.63■■□□□ 1.05
PHGDH-223ENST00000641597 PLEKHF1Q96S99 279 aa21.63■■□□□ 1.05
PHGDH-223ENST00000641597 CABP1Q9NZU7 370 aa21.63■■□□□ 1.05
PHGDH-223ENST00000641597 TRIM35Q9UPQ4 493 aa21.63■■□□□ 1.05
PHGDH-223ENST00000641597 SUGP2Q8IX01 1082 aaKnown RBP eCLIP21.62■■□□□ 1.05
PHGDH-223ENST00000641597 SLC52A1Q9NWF4 448 aa21.62■■□□□ 1.05
PHGDH-223ENST00000641597 DAXXQ9UER7 740 aaPredicted RBP21.62■■□□□ 1.05
PHGDH-223ENST00000641597 NFKBIBQ15653 356 aa21.62■■□□□ 1.05
PHGDH-223ENST00000641597 CD163L1Q9NR16 1453 aa21.61■■□□□ 1.05
PHGDH-223ENST00000641597 TMPOP42166 694 aaKnown RBP21.61■■□□□ 1.05
PHGDH-223ENST00000641597 CCDC27Q2M243 656 aa21.61■■□□□ 1.05
PHGDH-223ENST00000641597 MLECQ14165 292 aa21.6■■□□□ 1.05
PHGDH-223ENST00000641597 CDK19Q9BWU1 502 aa21.6■■□□□ 1.05
PHGDH-223ENST00000641597 STAG3Q9UJ98 1225 aa21.6■■□□□ 1.05
PHGDH-223ENST00000641597 TMEM131LA2VDJ0 1609 aa21.6■■□□□ 1.05
PHGDH-223ENST00000641597 MYH16Q9H6N6 1097 aa21.59■■□□□ 1.05
PHGDH-223ENST00000641597 PDZRN3Q9UPQ7 1066 aa21.59■■□□□ 1.05
PHGDH-223ENST00000641597 ARHGAP31Q2M1Z3 1444 aa21.59■■□□□ 1.05
PHGDH-223ENST00000641597 YTHDC2Q9H6S0 1430 aaKnown RBP21.59■■□□□ 1.05
PHGDH-223ENST00000641597 PREX1Q8TCU6 1659 aa21.58■■□□□ 1.05
PHGDH-223ENST00000641597 NSD2O96028 1365 aa21.57■■□□□ 1.04
PHGDH-223ENST00000641597 SSH1Q8WYL5 1049 aa21.57■■□□□ 1.04
PHGDH-223ENST00000641597 SMC4Q9NTJ3 1288 aa21.57■■□□□ 1.04
PHGDH-223ENST00000641597 PUS7Q96PZ0 661 aaKnown RBP21.57■■□□□ 1.04
PHGDH-223ENST00000641597 NINLQ9Y2I6 1382 aa21.56■■□□□ 1.04
PHGDH-223ENST00000641597 COL3A1P02461 1466 aaPredicted RBP21.56■■□□□ 1.04
PHGDH-223ENST00000641597 RIPK4P57078 832 aa21.56■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms