RNA–Protein interactions for RNA: ENST00000641570.1

PHGDH-220, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 1,036 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-220ENST00000641570 ARHGEF28Q8N1W1 1705 aaKnown RBP18■□□□□ 0.47
PHGDH-220ENST00000641570 CHD2O14647 1828 aaKnown RBP18■□□□□ 0.47
PHGDH-220ENST00000641570 ATF3P18847 181 aa17.99■□□□□ 0.47
PHGDH-220ENST00000641570 TMEM94Q12767 1356 aa17.99■□□□□ 0.47
PHGDH-220ENST00000641570 PLEKHH1Q9ULM0 1364 aa17.98■□□□□ 0.47
PHGDH-220ENST00000641570 SBNO2Q9Y2G9 1366 aa17.98■□□□□ 0.47
PHGDH-220ENST00000641570 NCOA3Q9Y6Q9 1424 aa17.98■□□□□ 0.47
PHGDH-220ENST00000641570 QRICH2Q9H0J4 1663 aa17.97■□□□□ 0.47
PHGDH-220ENST00000641570 ZNF316A6NFI3 1004 aaPredicted RBP17.97■□□□□ 0.47
PHGDH-220ENST00000641570 RBM33Q96EV2 1170 aaKnown RBP17.96■□□□□ 0.47
PHGDH-220ENST00000641570 C19orf44Q9H6X5 657 aa17.95■□□□□ 0.46
PHGDH-220ENST00000641570 ADGRL3Q9HAR2 1447 aa17.95■□□□□ 0.46
PHGDH-220ENST00000641570 WASLO00401 505 aaPredicted RBP17.94■□□□□ 0.46
PHGDH-220ENST00000641570 CADPS2Q86UW7 1296 aa17.94■□□□□ 0.46
PHGDH-220ENST00000641570 CDK19Q9BWU1 502 aa17.93■□□□□ 0.46
PHGDH-220ENST00000641570 ATAD2Q6PL18 1390 aa17.92■□□□□ 0.46
PHGDH-220ENST00000641570 TMC1Q8TDI8 760 aa17.92■□□□□ 0.46
PHGDH-220ENST00000641570 TESK2Q96S53 571 aa17.92■□□□□ 0.46
PHGDH-220ENST00000641570 LRRC7Q96NW7 1537 aa17.92■□□□□ 0.46
PHGDH-220ENST00000641570 CABP2Q9NPB3 220 aa17.9■□□□□ 0.46
PHGDH-220ENST00000641570 DCCP43146 1447 aa17.89■□□□□ 0.46
PHGDH-220ENST00000641570 NUTM2FA1L443 756 aa17.89■□□□□ 0.45
PHGDH-220ENST00000641570 DISP3Q9P2K9 1392 aa17.89■□□□□ 0.45
PHGDH-220ENST00000641570 ADGRB2O60241 1585 aa17.88■□□□□ 0.45
PHGDH-220ENST00000641570 CDC42BPGQ6DT37 1551 aa17.88■□□□□ 0.45
PHGDH-220ENST00000641570 PUS7Q96PZ0 661 aaKnown RBP17.87■□□□□ 0.45
PHGDH-220ENST00000641570 KIF7Q2M1P5 1343 aa17.86■□□□□ 0.45
PHGDH-220ENST00000641570 NINLQ9Y2I6 1382 aa17.86■□□□□ 0.45
PHGDH-220ENST00000641570 STRCP1A6NGW2 1772 aa17.85■□□□□ 0.45
PHGDH-220ENST00000641570 HDGFL2Q7Z4V5 671 aaPredicted RBP17.85■□□□□ 0.45
PHGDH-220ENST00000641570 ANKARQ7Z5J8 1434 aa17.85■□□□□ 0.45
PHGDH-220ENST00000641570 NUDT16Q96DE0 195 aaKnown RBP17.85■□□□□ 0.45
PHGDH-220ENST00000641570 CCDC7Q96M83 1385 aa17.85■□□□□ 0.45
PHGDH-220ENST00000641570 TULP4Q9NRJ4 1543 aa17.85■□□□□ 0.45
PHGDH-220ENST00000641570 NALCNQ8IZF0 1738 aa17.84■□□□□ 0.45
PHGDH-220ENST00000641570 SCAF1Q9H7N4 1312 aaKnown RBP17.84■□□□□ 0.45
PHGDH-220ENST00000641570 TOM1O60784 492 aa17.84■□□□□ 0.45
PHGDH-220ENST00000641570 ESCO1Q5FWF5 840 aa17.84■□□□□ 0.45
PHGDH-220ENST00000641570 TERF2IPQ9NYB0 399 aa17.84■□□□□ 0.45
PHGDH-220ENST00000641570 CCDC61Q9Y6R9 512 aa17.84■□□□□ 0.45
PHGDH-220ENST00000641570 SIPA1L2Q9P2F8 1722 aaPredicted RBP17.84■□□□□ 0.45
PHGDH-220ENST00000641570 LTBP4Q8N2S1 1624 aa17.83■□□□□ 0.45
PHGDH-220ENST00000641570 NGDNQ8NEJ9 315 aaKnown RBP17.83■□□□□ 0.44
PHGDH-220ENST00000641570 PPIP5K1Q6PFW1 1433 aa17.81■□□□□ 0.44
PHGDH-220ENST00000641570 WASHC2AQ641Q2 1341 aa17.81■□□□□ 0.44
PHGDH-220ENST00000641570 CERKQ8TCT0 537 aa17.81■□□□□ 0.44
PHGDH-220ENST00000641570 IQSEC2Q5JU85 1478 aa17.8■□□□□ 0.44
PHGDH-220ENST00000641570 UBAP1LF5GYI3 381 aa17.79■□□□□ 0.44
PHGDH-220ENST00000641570 CABP1Q9NZU7 370 aa17.79■□□□□ 0.44
PHGDH-220ENST00000641570 PHF8Q9UPP1 1060 aa17.79■□□□□ 0.44
PHGDH-220ENST00000641570 ATP7BP35670 1465 aa17.78■□□□□ 0.44
PHGDH-220ENST00000641570 SLAIN2Q9P270 581 aa17.78■□□□□ 0.44
PHGDH-220ENST00000641570 PMFBP1Q8TBY8 1022 aa17.77■□□□□ 0.44
PHGDH-220ENST00000641570 FMN2Q9NZ56 1722 aa17.77■□□□□ 0.44
PHGDH-220ENST00000641570 C1orf167Q5SNV9 1468 aa17.76■□□□□ 0.43
PHGDH-220ENST00000641570 ITSN1Q15811 1721 aa17.76■□□□□ 0.43
PHGDH-220ENST00000641570 MST1RQ04912 1400 aa17.76■□□□□ 0.43
PHGDH-220ENST00000641570 C11orf95C9JLR9 678 aaPredicted RBP17.76■□□□□ 0.43
PHGDH-220ENST00000641570 PSME1Q06323 249 aa17.76■□□□□ 0.43
PHGDH-220ENST00000641570 DDX10Q13206 875 aaKnown RBP17.76■□□□□ 0.43
PHGDH-220ENST00000641570 PIP4K2BP78356 416 aa17.75■□□□□ 0.43
PHGDH-220ENST00000641570 ZNF692Q9BU19 519 aaPredicted RBP17.75■□□□□ 0.43
PHGDH-220ENST00000641570 KNSTRNQ9Y448 316 aa17.75■□□□□ 0.43
PHGDH-220ENST00000641570 SLC12A5Q9H2X9 1139 aa17.74■□□□□ 0.43
PHGDH-220ENST00000641570 ANKRD36BQ8N2N9 1353 aa17.74■□□□□ 0.43
PHGDH-220ENST00000641570 NPHP3Q7Z494 1330 aa17.73■□□□□ 0.43
PHGDH-220ENST00000641570 PRR36Q9H6K5 1346 aa17.73■□□□□ 0.43
PHGDH-220ENST00000641570 PANK3Q9H999 370 aa17.73■□□□□ 0.43
PHGDH-220ENST00000641570 KTN1Q86UP2 1357 aaKnown RBP17.73■□□□□ 0.43
PHGDH-220ENST00000641570 PLEKHG3A1L390 1219 aa17.72■□□□□ 0.43
PHGDH-220ENST00000641570 ACEP12821 1306 aa17.72■□□□□ 0.43
PHGDH-220ENST00000641570 PAK3O75914 559 aaPredicted RBP17.71■□□□□ 0.43
PHGDH-220ENST00000641570 ORAI2Q96SN7 254 aa17.71■□□□□ 0.43
PHGDH-220ENST00000641570 KIF1AQ12756 1690 aa17.71■□□□□ 0.42
PHGDH-220ENST00000641570 XIRP1Q702N8 1843 aaKnown RBP17.7■□□□□ 0.42
PHGDH-220ENST00000641570 A0A1W2PP64 1363 aa17.69■□□□□ 0.42
PHGDH-220ENST00000641570 FOXO3O43524 673 aa17.69■□□□□ 0.42
PHGDH-220ENST00000641570 LMOD2Q6P5Q4 547 aa17.69■□□□□ 0.42
PHGDH-220ENST00000641570 BRINP3Q76B58 766 aa17.69■□□□□ 0.42
PHGDH-220ENST00000641570 CGNL1Q0VF96 1302 aa17.69■□□□□ 0.42
PHGDH-220ENST00000641570 NSD3Q9BZ95 1437 aa17.68■□□□□ 0.42
PHGDH-220ENST00000641570 TOPAZ1Q8N9V7 1692 aa17.67■□□□□ 0.42
PHGDH-220ENST00000641570 POLR3AO14802 1390 aaPredicted RBP17.66■□□□□ 0.42
PHGDH-220ENST00000641570 BRD4O60885 1362 aaPredicted RBP17.66■□□□□ 0.42
PHGDH-220ENST00000641570 EDC4Q6P2E9 1401 aaKnown RBP17.66■□□□□ 0.42
PHGDH-220ENST00000641570 USP32Q8NFA0 1604 aa17.66■□□□□ 0.42
PHGDH-220ENST00000641570 CNGB1Q14028 1251 aaPredicted RBP17.66■□□□□ 0.42
PHGDH-220ENST00000641570 KRT28Q7Z3Y7 464 aa17.66■□□□□ 0.42
PHGDH-220ENST00000641570 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.66■□□□□ 0.42
PHGDH-220ENST00000641570 ANP32CO43423 234 aa17.64■□□□□ 0.41
PHGDH-220ENST00000641570 XPCQ01831 940 aaPredicted RBP17.64■□□□□ 0.41
PHGDH-220ENST00000641570 TTC21AQ8NDW8 1320 aa17.64■□□□□ 0.41
PHGDH-220ENST00000641570 USP6P35125 1406 aa17.64■□□□□ 0.41
PHGDH-220ENST00000641570 DIEXFQ68CQ4 756 aaKnown RBP17.63■□□□□ 0.41
PHGDH-220ENST00000641570 MYOM1P52179 1685 aa17.63■□□□□ 0.41
PHGDH-220ENST00000641570 HAP1P54257 671 aaPredicted RBP17.62■□□□□ 0.41
PHGDH-220ENST00000641570 ABTB2Q8N961 1025 aa17.62■□□□□ 0.41
PHGDH-220ENST00000641570 CPSF1Q10570 1443 aaKnown RBP17.62■□□□□ 0.41
PHGDH-220ENST00000641570 COG3Q96JB2 828 aa17.61■□□□□ 0.41
PHGDH-220ENST00000641570 TTC21BQ7Z4L5 1316 aa17.61■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms