RNA–Protein interactions for RNA: ENST00000641455.1

PHGDH-217, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 312 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-217ENST00000641455 RALGAPBQ86X10 1494 aa12.14□□□□□ -0.47
PHGDH-217ENST00000641455 NPHP3Q7Z494 1330 aa12.13□□□□□ -0.47
PHGDH-217ENST00000641455 LOC105371045A0A1W2PR82 267 aa12.13□□□□□ -0.47
PHGDH-217ENST00000641455 ESCO1Q5FWF5 840 aa12.13□□□□□ -0.47
PHGDH-217ENST00000641455 NUP155O75694 1391 aa12.13□□□□□ -0.47
PHGDH-217ENST00000641455 BRWD3Q6RI45 1802 aa12.13□□□□□ -0.47
PHGDH-217ENST00000641455 TNKS1BP1Q9C0C2 1729 aaKnown RBP12.12□□□□□ -0.47
PHGDH-217ENST00000641455 UNC5CLQ8IV45 518 aa12.12□□□□□ -0.47
PHGDH-217ENST00000641455 GLI3P10071 1580 aa12.12□□□□□ -0.47
PHGDH-217ENST00000641455 ROBO2Q9HCK4 1378 aa12.11□□□□□ -0.47
PHGDH-217ENST00000641455 SEPT12Q8IYM1 358 aa12.11□□□□□ -0.47
PHGDH-217ENST00000641455 CCDC9Q9Y3X0 531 aaKnown RBP12.11□□□□□ -0.47
PHGDH-217ENST00000641455 SPHKAPQ2M3C7 1700 aa12.11□□□□□ -0.47
PHGDH-217ENST00000641455 A0A0G2JS52 829 aa12.1□□□□□ -0.47
PHGDH-217ENST00000641455 HRCP23327 699 aa12.1□□□□□ -0.47
PHGDH-217ENST00000641455 BAG6P46379 1132 aa12.1□□□□□ -0.47
PHGDH-217ENST00000641455 MYT1Q01538 1121 aa12.1□□□□□ -0.47
PHGDH-217ENST00000641455 FOXO3O43524 673 aa12.09□□□□□ -0.47
PHGDH-217ENST00000641455 HAP1P54257 671 aaPredicted RBP12.09□□□□□ -0.47
PHGDH-217ENST00000641455 NEXMIFQ5QGS0 1516 aa12.09□□□□□ -0.47
PHGDH-217ENST00000641455 PXDNQ92626 1479 aa12.08□□□□□ -0.47
PHGDH-217ENST00000641455 PLEKHG5O94827 1062 aa12.08□□□□□ -0.48
PHGDH-217ENST00000641455 LRPPRCP42704 1394 aaKnown RBP12.07□□□□□ -0.48
PHGDH-217ENST00000641455 SLIT2O94813 1529 aa12.07□□□□□ -0.48
PHGDH-217ENST00000641455 NUTM2FA1L443 756 aa12.07□□□□□ -0.48
PHGDH-217ENST00000641455 KRT27Q7Z3Y8 459 aa12.07□□□□□ -0.48
PHGDH-217ENST00000641455 HFM1A2PYH4 1435 aa12.06□□□□□ -0.48
PHGDH-217ENST00000641455 YY1P25490 414 aa12.05□□□□□ -0.48
PHGDH-217ENST00000641455 R3HDM1Q15032 1099 aaKnown RBP12.05□□□□□ -0.48
PHGDH-217ENST00000641455 CDC42BPGQ6DT37 1551 aa12.05□□□□□ -0.48
PHGDH-217ENST00000641455 KIF1BO60333 1816 aa12.04□□□□□ -0.48
PHGDH-217ENST00000641455 CLTCL1P53675 1640 aa12.04□□□□□ -0.48
PHGDH-217ENST00000641455 USP32Q8NFA0 1604 aa12.04□□□□□ -0.48
PHGDH-217ENST00000641455 ITGAEP38570 1179 aa12.04□□□□□ -0.48
PHGDH-217ENST00000641455 VPS72Q15906 364 aa12.04□□□□□ -0.48
PHGDH-217ENST00000641455 ROCK1Q13464 1354 aa12.04□□□□□ -0.48
PHGDH-217ENST00000641455 VGFO15240 615 aaPredicted RBP12.03□□□□□ -0.48
PHGDH-217ENST00000641455 EN1Q05925 392 aaPredicted RBP12.03□□□□□ -0.48
PHGDH-217ENST00000641455 PLCH1Q4KWH8 1693 aa12.02□□□□□ -0.49
PHGDH-217ENST00000641455 SPATA31A3Q5VYP0 1347 aa12.02□□□□□ -0.49
PHGDH-217ENST00000641455 NAIPQ13075 1403 aa12.02□□□□□ -0.49
PHGDH-217ENST00000641455 PRAG1Q86YV5 1406 aa12.01□□□□□ -0.49
PHGDH-217ENST00000641455 LMOD2Q6P5Q4 547 aa12□□□□□ -0.49
PHGDH-217ENST00000641455 CABLES1Q8TDN4 633 aa12□□□□□ -0.49
PHGDH-217ENST00000641455 CCDC144AA2RUR9 1427 aa12□□□□□ -0.49
PHGDH-217ENST00000641455 RGPD1P0DJD0 1748 aa12□□□□□ -0.49
PHGDH-217ENST00000641455 FAM98CQ17RN3 349 aaKnown RBP11.99□□□□□ -0.49
PHGDH-217ENST00000641455 KRT28Q7Z3Y7 464 aa11.99□□□□□ -0.49
PHGDH-217ENST00000641455 STK26Q9P289 416 aa11.99□□□□□ -0.49
PHGDH-217ENST00000641455 NWD2Q9ULI1 1742 aa11.99□□□□□ -0.49
PHGDH-217ENST00000641455 KIF1AQ12756 1690 aa11.98□□□□□ -0.49
PHGDH-217ENST00000641455 ONECUT3O60422 494 aaPredicted RBP11.98□□□□□ -0.49
PHGDH-217ENST00000641455 FAM182BQ5T319 152 aa11.98□□□□□ -0.49
PHGDH-217ENST00000641455 TNS3Q68CZ2 1445 aa11.97□□□□□ -0.49
PHGDH-217ENST00000641455 WAPLQ7Z5K2 1190 aa11.97□□□□□ -0.49
PHGDH-217ENST00000641455 DCAF8L1A6NGE4 600 aa11.96□□□□□ -0.49
PHGDH-217ENST00000641455 PSME1Q06323 249 aa11.96□□□□□ -0.49
PHGDH-217ENST00000641455 FMN2Q9NZ56 1722 aa11.95□□□□□ -0.5
PHGDH-217ENST00000641455 EZH2Q15910 746 aaKnown RBP11.95□□□□□ -0.5
PHGDH-217ENST00000641455 ABCA3Q99758 1704 aa11.94□□□□□ -0.5
PHGDH-217ENST00000641455 RPGRIP1LQ68CZ1 1315 aa11.94□□□□□ -0.5
PHGDH-217ENST00000641455 PPP1R1BQ9UD71 204 aaPredicted RBP11.94□□□□□ -0.5
PHGDH-217ENST00000641455 PPLO60437 1756 aa11.94□□□□□ -0.5
PHGDH-217ENST00000641455 ADGRB2O60241 1585 aa11.93□□□□□ -0.5
PHGDH-217ENST00000641455 FAM83GA6ND36 823 aa11.93□□□□□ -0.5
PHGDH-217ENST00000641455 BTG4Q9NY30 223 aa11.93□□□□□ -0.5
PHGDH-217ENST00000641455 PHF8Q9UPP1 1060 aa11.93□□□□□ -0.5
PHGDH-217ENST00000641455 TNS1Q9HBL0 1735 aaKnown RBP11.93□□□□□ -0.5
PHGDH-217ENST00000641455 ARHGEF10O15013 1369 aa11.92□□□□□ -0.5
PHGDH-217ENST00000641455 PLEKHH1Q9ULM0 1364 aa11.92□□□□□ -0.5
PHGDH-217ENST00000641455 NRAPQ86VF7 1730 aa11.92□□□□□ -0.5
PHGDH-217ENST00000641455 DISP2A7MBM2 1401 aa11.92□□□□□ -0.5
PHGDH-217ENST00000641455 TRIM37O94972 964 aa11.91□□□□□ -0.5
PHGDH-217ENST00000641455 RGPD8O14715 1765 aaPredicted RBP11.91□□□□□ -0.5
PHGDH-217ENST00000641455 SBNO1A3KN83 1393 aa11.91□□□□□ -0.5
PHGDH-217ENST00000641455 TECPR2O15040 1411 aa11.9□□□□□ -0.5
PHGDH-217ENST00000641455 APBA3O96018 575 aa11.9□□□□□ -0.5
PHGDH-217ENST00000641455 IFT172Q9UG01 1749 aa11.9□□□□□ -0.5
PHGDH-217ENST00000641455 ADGRF5Q8IZF2 1346 aa11.89□□□□□ -0.51
PHGDH-217ENST00000641455 TMEM132EQ6IEE7 984 aa11.89□□□□□ -0.51
PHGDH-217ENST00000641455 CAMKK2Q96RR4 588 aa11.89□□□□□ -0.51
PHGDH-217ENST00000641455 KNDC1Q76NI1 1749 aa11.89□□□□□ -0.51
PHGDH-217ENST00000641455 SPATA31A5Q5VU36 1347 aa11.88□□□□□ -0.51
PHGDH-217ENST00000641455 SPATA31A7Q8IWB4 1347 aa11.88□□□□□ -0.51
PHGDH-217ENST00000641455 COL14A1Q05707 1796 aaKnown RBP11.88□□□□□ -0.51
PHGDH-217ENST00000641455 NBPF8Q3BBV2 869 aa11.88□□□□□ -0.51
PHGDH-217ENST00000641455 NBPF14Q5TI25 921 aa11.88□□□□□ -0.51
PHGDH-217ENST00000641455 ABCC11Q96J66 1382 aa11.88□□□□□ -0.51
PHGDH-217ENST00000641455 RRBP1Q9P2E9 1410 aaKnown RBP11.87□□□□□ -0.51
PHGDH-217ENST00000641455 FAM196AQ6ZSG2 479 aa11.87□□□□□ -0.51
PHGDH-217ENST00000641455 PMFBP1Q8TBY8 1022 aa11.87□□□□□ -0.51
PHGDH-217ENST00000641455 SPON1Q9HCB6 807 aa11.87□□□□□ -0.51
PHGDH-217ENST00000641455 PARD3Q8TEW0 1356 aa11.87□□□□□ -0.51
PHGDH-217ENST00000641455 NRXN1Q9ULB1 1477 aa11.87□□□□□ -0.51
PHGDH-217ENST00000641455 THSD7AQ9UPZ6 1657 aa11.87□□□□□ -0.51
PHGDH-217ENST00000641455 SENP3-EIF4A1A0A087X0R7 540 aa11.86□□□□□ -0.51
PHGDH-217ENST00000641455 SAFB2Q14151 953 aaKnown RBP eCLIP11.86□□□□□ -0.51
PHGDH-217ENST00000641455 RGL3Q3MIN7 710 aa11.86□□□□□ -0.51
PHGDH-217ENST00000641455 NINLQ9Y2I6 1382 aa11.85□□□□□ -0.51
PHGDH-217ENST00000641455 PRDM11Q9NQV5 511 aa11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms