RNA–Protein interactions for RNA: ENST00000641272.1

PHGDH-213, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 758 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-213ENST00000641272 TECPR2O15040 1411 aa24.88■■□□□ 1.57
PHGDH-213ENST00000641272 PLEKHH1Q9ULM0 1364 aa24.88■■□□□ 1.57
PHGDH-213ENST00000641272 LRPPRCP42704 1394 aaKnown RBP24.86■■□□□ 1.57
PHGDH-213ENST00000641272 ADAMTS2O95450 1211 aa24.86■■□□□ 1.57
PHGDH-213ENST00000641272 RXRBP28702 533 aa24.86■■□□□ 1.57
PHGDH-213ENST00000641272 TMEM132EQ6IEE7 984 aa24.86■■□□□ 1.57
PHGDH-213ENST00000641272 FMN2Q9NZ56 1722 aa24.86■■□□□ 1.57
PHGDH-213ENST00000641272 COL22A1Q8NFW1 1626 aaPredicted RBP24.86■■□□□ 1.57
PHGDH-213ENST00000641272 SOS2Q07890 1332 aaPredicted RBP24.86■■□□□ 1.57
PHGDH-213ENST00000641272 NUTM2FA1L443 756 aa24.85■■□□□ 1.57
PHGDH-213ENST00000641272 WAPLQ7Z5K2 1190 aa24.85■■□□□ 1.57
PHGDH-213ENST00000641272 PXDNQ92626 1479 aa24.83■■□□□ 1.57
PHGDH-213ENST00000641272 RGS12O14924 1447 aa24.83■■□□□ 1.57
PHGDH-213ENST00000641272 CDK12Q9NYV4 1490 aaPredicted RBP24.83■■□□□ 1.56
PHGDH-213ENST00000641272 RAB3GAP2Q9H2M9 1393 aa24.82■■□□□ 1.56
PHGDH-213ENST00000641272 ESCO1Q5FWF5 840 aa24.82■■□□□ 1.56
PHGDH-213ENST00000641272 YTHDC2Q9H6S0 1430 aaKnown RBP24.82■■□□□ 1.56
PHGDH-213ENST00000641272 XPCQ01831 940 aaPredicted RBP24.81■■□□□ 1.56
PHGDH-213ENST00000641272 MYOM2P54296 1465 aa24.8■■□□□ 1.56
PHGDH-213ENST00000641272 ABCC11Q96J66 1382 aa24.79■■□□□ 1.56
PHGDH-213ENST00000641272 KIF1AQ12756 1690 aa24.78■■□□□ 1.56
PHGDH-213ENST00000641272 MARF1Q9Y4F3 1742 aaKnown RBP24.78■■□□□ 1.56
PHGDH-213ENST00000641272 NRXN1Q9ULB1 1477 aa24.78■■□□□ 1.56
PHGDH-213ENST00000641272 NPHP3Q7Z494 1330 aa24.78■■□□□ 1.56
PHGDH-213ENST00000641272 UPF1Q92900 1129 aaKnown RBP eCLIP24.77■■□□□ 1.56
PHGDH-213ENST00000641272 NGLY1Q96IV0 654 aa24.77■■□□□ 1.56
PHGDH-213ENST00000641272 RGPD8O14715 1765 aaPredicted RBP24.77■■□□□ 1.56
PHGDH-213ENST00000641272 QTRT2Q9H974 415 aaKnown RBP24.75■■□□□ 1.55
PHGDH-213ENST00000641272 FOXO3O43524 673 aa24.74■■□□□ 1.55
PHGDH-213ENST00000641272 CFAP70Q5T0N1 1121 aa24.73■■□□□ 1.55
PHGDH-213ENST00000641272 RBM6P78332 1123 aaKnown RBP24.71■■□□□ 1.55
PHGDH-213ENST00000641272 SAFB2Q14151 953 aaKnown RBP eCLIP24.7■■□□□ 1.54
PHGDH-213ENST00000641272 USP21Q9UK80 565 aa24.7■■□□□ 1.54
PHGDH-213ENST00000641272 C14orf93Q9H972 538 aaKnown RBP24.69■■□□□ 1.54
PHGDH-213ENST00000641272 DHX57Q6P158 1386 aaKnown RBP24.67■■□□□ 1.54
PHGDH-213ENST00000641272 ADGRB1O14514 1584 aa24.67■■□□□ 1.54
PHGDH-213ENST00000641272 ACIN1Q9UKV3 1341 aaKnown RBP24.66■■□□□ 1.54
PHGDH-213ENST00000641272 USP32Q8NFA0 1604 aa24.66■■□□□ 1.54
PHGDH-213ENST00000641272 ATRNO75882 1429 aa24.66■■□□□ 1.54
PHGDH-213ENST00000641272 PRAM1Q96QH2 718 aa24.65■■□□□ 1.54
PHGDH-213ENST00000641272 ABCA3Q99758 1704 aa24.65■■□□□ 1.54
PHGDH-213ENST00000641272 DLC1Q96QB1 1528 aa24.65■■□□□ 1.54
PHGDH-213ENST00000641272 ADGRB2O60241 1585 aa24.63■■□□□ 1.53
PHGDH-213ENST00000641272 TRPC5Q9UL62 973 aaPredicted RBP24.63■■□□□ 1.53
PHGDH-213ENST00000641272 TNKS1BP1Q9C0C2 1729 aaKnown RBP24.63■■□□□ 1.53
PHGDH-213ENST00000641272 PLEKHG5O94827 1062 aa24.62■■□□□ 1.53
PHGDH-213ENST00000641272 FNBP4Q8N3X1 1017 aaPredicted RBP24.62■■□□□ 1.53
PHGDH-213ENST00000641272 TNS3Q68CZ2 1445 aa24.61■■□□□ 1.53
PHGDH-213ENST00000641272 BCL9LQ86UU0 1499 aa24.61■■□□□ 1.53
PHGDH-213ENST00000641272 SPATA31A3Q5VYP0 1347 aa24.61■■□□□ 1.53
PHGDH-213ENST00000641272 PHF8Q9UPP1 1060 aa24.59■■□□□ 1.53
PHGDH-213ENST00000641272 KDM2AQ9Y2K7 1162 aa24.59■■□□□ 1.53
PHGDH-213ENST00000641272 PLCH1Q4KWH8 1693 aa24.59■■□□□ 1.53
PHGDH-213ENST00000641272 KRT28Q7Z3Y7 464 aa24.58■■□□□ 1.53
PHGDH-213ENST00000641272 SIRT1Q96EB6 747 aa24.58■■□□□ 1.53
PHGDH-213ENST00000641272 POGKQ9P215 609 aa24.58■■□□□ 1.53
PHGDH-213ENST00000641272 TRAK1Q9UPV9 953 aa24.57■■□□□ 1.52
PHGDH-213ENST00000641272 ATAD2Q6PL18 1390 aa24.56■■□□□ 1.52
PHGDH-213ENST00000641272 ARHGEF28Q8N1W1 1705 aaKnown RBP24.56■■□□□ 1.52
PHGDH-213ENST00000641272 HIRIP3Q9BW71 556 aaPredicted RBP24.56■■□□□ 1.52
PHGDH-213ENST00000641272 GLI3P10071 1580 aa24.55■■□□□ 1.52
PHGDH-213ENST00000641272 DCAF11Q8TEB1 546 aa24.55■■□□□ 1.52
PHGDH-213ENST00000641272 TRPM3Q9HCF6 1732 aaPredicted RBP24.54■■□□□ 1.52
PHGDH-213ENST00000641272 SLIT2O94813 1529 aa24.54■■□□□ 1.52
PHGDH-213ENST00000641272 MINK1Q8N4C8 1332 aaPredicted RBP24.54■■□□□ 1.52
PHGDH-213ENST00000641272 ANKARQ7Z5J8 1434 aa24.53■■□□□ 1.52
PHGDH-213ENST00000641272 HAP1P54257 671 aaPredicted RBP24.53■■□□□ 1.52
PHGDH-213ENST00000641272 PMFBP1Q8TBY8 1022 aa24.53■■□□□ 1.52
PHGDH-213ENST00000641272 CABLES1Q8TDN4 633 aa24.53■■□□□ 1.52
PHGDH-213ENST00000641272 TULP4Q9NRJ4 1543 aa24.52■■□□□ 1.52
PHGDH-213ENST00000641272 LMOD2Q6P5Q4 547 aa24.52■■□□□ 1.52
PHGDH-213ENST00000641272 RALGAPBQ86X10 1494 aa24.51■■□□□ 1.51
PHGDH-213ENST00000641272 SBNO1A3KN83 1393 aa24.49■■□□□ 1.51
PHGDH-213ENST00000641272 ALS2Q96Q42 1657 aa24.49■■□□□ 1.51
PHGDH-213ENST00000641272 NWD2Q9ULI1 1742 aa24.49■■□□□ 1.51
PHGDH-213ENST00000641272 PSME1Q06323 249 aa24.48■■□□□ 1.51
PHGDH-213ENST00000641272 BRWD3Q6RI45 1802 aa24.48■■□□□ 1.51
PHGDH-213ENST00000641272 PRR36Q9H6K5 1346 aa24.47■■□□□ 1.51
PHGDH-213ENST00000641272 GJD4Q96KN9 370 aaPredicted RBP24.47■■□□□ 1.51
PHGDH-213ENST00000641272 ITSN1Q15811 1721 aa24.47■■□□□ 1.51
PHGDH-213ENST00000641272 ARHGEF10O15013 1369 aa24.46■■□□□ 1.51
PHGDH-213ENST00000641272 UNC5CLQ8IV45 518 aa24.46■■□□□ 1.51
PHGDH-213ENST00000641272 NRAPQ86VF7 1730 aa24.44■■□□□ 1.5
PHGDH-213ENST00000641272 CRYBG1Q9Y4K1 1723 aa24.44■■□□□ 1.5
PHGDH-213ENST00000641272 EIF3AQ14152 1382 aaKnown RBP24.43■■□□□ 1.5
PHGDH-213ENST00000641272 EP400Q96L91 3159 aa24.42■■□□□ 1.5
PHGDH-213ENST00000641272 ATP7BP35670 1465 aa24.42■■□□□ 1.5
PHGDH-213ENST00000641272 GPRASP1Q5JY77 1395 aa24.4■■□□□ 1.5
PHGDH-213ENST00000641272 WASLO00401 505 aaPredicted RBP24.39■■□□□ 1.49
PHGDH-213ENST00000641272 CCDC9Q9Y3X0 531 aaKnown RBP24.39■■□□□ 1.49
PHGDH-213ENST00000641272 TOPAZ1Q8N9V7 1692 aa24.39■■□□□ 1.49
PHGDH-213ENST00000641272 KIAA1210Q9ULL0 1709 aa24.38■■□□□ 1.49
PHGDH-213ENST00000641272 COL14A1Q05707 1796 aaKnown RBP24.37■■□□□ 1.49
PHGDH-213ENST00000641272 HRCP23327 699 aa24.37■■□□□ 1.49
PHGDH-213ENST00000641272 PHRF1Q9P1Y6 1649 aaKnown RBP24.35■■□□□ 1.49
PHGDH-213ENST00000641272 VPS72Q15906 364 aa24.34■■□□□ 1.49
PHGDH-213ENST00000641272 NGDNQ8NEJ9 315 aaKnown RBP24.34■■□□□ 1.49
PHGDH-213ENST00000641272 FAM83GA6ND36 823 aa24.33■■□□□ 1.49
PHGDH-213ENST00000641272 PAK3O75914 559 aaPredicted RBP24.33■■□□□ 1.49
PHGDH-213ENST00000641272 SEPT12Q8IYM1 358 aa24.33■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 8.5 ms