RNA–Protein interactions for RNA: ENST00000641012.1

MACF1-234, Transcript of microtubule-actin crosslinking factor 1, humanhuman

BASIC

Gene MACF1, Length 4,284 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MACF1-234ENST00000641012 C14orf93Q9H972 538 aaKnown RBP13.81□□□□□ -0.2
MACF1-234ENST00000641012 PLIN1O60240 522 aa13.8□□□□□ -0.2
MACF1-234ENST00000641012 PLEKHO1Q53GL0 409 aaPredicted RBP13.8□□□□□ -0.2
MACF1-234ENST00000641012 FRAT2O75474 233 aaPredicted RBP13.8□□□□□ -0.2
MACF1-234ENST00000641012 FKBP5Q13451 457 aaPredicted RBP13.8□□□□□ -0.2
MACF1-234ENST00000641012 ZMYM3Q14202 1370 aa13.79□□□□□ -0.2
MACF1-234ENST00000641012 CADPS2Q86UW7 1296 aa13.79□□□□□ -0.2
MACF1-234ENST00000641012 GNAI1P63096 354 aa13.79□□□□□ -0.2
MACF1-234ENST00000641012 EIF5BO60841 1220 aaKnown RBP13.78□□□□□ -0.2
MACF1-234ENST00000641012 GAS2L2Q8NHY3 880 aa13.78□□□□□ -0.2
MACF1-234ENST00000641012 C9orf78Q9NZ63 289 aaPredicted RBP13.78□□□□□ -0.2
MACF1-234ENST00000641012 AIMP1Q12904 312 aaKnown RBP13.78□□□□□ -0.2
MACF1-234ENST00000641012 ZKSCAN2Q63HK3 967 aa13.78□□□□□ -0.2
MACF1-234ENST00000641012 ISY1Q9ULR0 285 aaKnown RBP13.78□□□□□ -0.2
MACF1-234ENST00000641012 UBAP1LF5GYI3 381 aa13.77□□□□□ -0.21
MACF1-234ENST00000641012 ZNF530Q6P9A1 599 aaPredicted RBP13.77□□□□□ -0.21
MACF1-234ENST00000641012 RBM42Q9BTD8 480 aaKnown RBP13.77□□□□□ -0.21
MACF1-234ENST00000641012 NME9Q86XW9 330 aa13.77□□□□□ -0.21
MACF1-234ENST00000641012 KLHL34Q8N239 644 aa13.77□□□□□ -0.21
MACF1-234ENST00000641012 FAM135AQ9P2D6 1515 aa13.77□□□□□ -0.21
MACF1-234ENST00000641012 DUOX2Q9NRD8 1548 aa13.76□□□□□ -0.21
MACF1-234ENST00000641012 DDX58O95786 925 aaKnown RBP13.76□□□□□ -0.21
MACF1-234ENST00000641012 COG6Q9Y2V7 657 aa13.76□□□□□ -0.21
MACF1-234ENST00000641012 SMG6Q86US8 1419 aaKnown RBP13.75□□□□□ -0.21
MACF1-234ENST00000641012 TPRNQ4KMQ1 711 aa13.75□□□□□ -0.21
MACF1-234ENST00000641012 KCNH5Q8NCM2 988 aa13.75□□□□□ -0.21
MACF1-234ENST00000641012 ZBED9Q6R2W3 1325 aa13.75□□□□□ -0.21
MACF1-234ENST00000641012 NCKAP5LQ9HCH0 1330 aa13.75□□□□□ -0.21
MACF1-234ENST00000641012 NGLY1Q96IV0 654 aa13.75□□□□□ -0.21
MACF1-234ENST00000641012 KIAA1211Q6ZU35 1233 aa13.74□□□□□ -0.21
MACF1-234ENST00000641012 KRT28Q7Z3Y7 464 aa13.74□□□□□ -0.21
MACF1-234ENST00000641012 TRIM6-TRIM34B2RNG4 842 aa13.73□□□□□ -0.21
MACF1-234ENST00000641012 NSD3Q9BZ95 1437 aa13.73□□□□□ -0.21
MACF1-234ENST00000641012 BRD4O60885 1362 aaPredicted RBP13.73□□□□□ -0.21
MACF1-234ENST00000641012 ANP32BQ92688 251 aaKnown RBP13.73□□□□□ -0.21
MACF1-234ENST00000641012 WDR97A6NE52 1622 aa13.72□□□□□ -0.21
MACF1-234ENST00000641012 TOM1O60784 492 aa13.72□□□□□ -0.21
MACF1-234ENST00000641012 NBR1Q14596 966 aa13.72□□□□□ -0.21
MACF1-234ENST00000641012 C11orf95C9JLR9 678 aaPredicted RBP13.72□□□□□ -0.21
MACF1-234ENST00000641012 DDRGK1Q96HY6 314 aa13.72□□□□□ -0.21
MACF1-234ENST00000641012 ITSN2Q9NZM3 1697 aa13.72□□□□□ -0.21
MACF1-234ENST00000641012 RIC3Q7Z5B4 369 aa13.72□□□□□ -0.21
MACF1-234ENST00000641012 RPRD2Q5VT52 1461 aaKnown RBP13.72□□□□□ -0.21
MACF1-234ENST00000641012 SF3B2Q13435 895 aaKnown RBP13.71□□□□□ -0.21
MACF1-234ENST00000641012 API5Q9BZZ5 524 aaKnown RBP13.71□□□□□ -0.21
MACF1-234ENST00000641012 DNAJC5Q9H3Z4 198 aa13.71□□□□□ -0.21
MACF1-234ENST00000641012 CABP4P57796 275 aa13.71□□□□□ -0.22
MACF1-234ENST00000641012 GPATCH3Q96I76 525 aa13.71□□□□□ -0.22
MACF1-234ENST00000641012 SPG7Q9UQ90 795 aa13.71□□□□□ -0.22
MACF1-234ENST00000641012 RIMS2Q9UQ26 1411 aa13.71□□□□□ -0.22
MACF1-234ENST00000641012 FAM177BA6PVY3 158 aa13.7□□□□□ -0.22
MACF1-234ENST00000641012 MSH6P52701 1360 aa13.7□□□□□ -0.22
MACF1-234ENST00000641012 KCNA6P17658 529 aa13.7□□□□□ -0.22
MACF1-234ENST00000641012 ATP10AO60312 1499 aa13.69□□□□□ -0.22
MACF1-234ENST00000641012 MCCP23508 829 aa13.69□□□□□ -0.22
MACF1-234ENST00000641012 ACEP12821 1306 aa13.69□□□□□ -0.22
MACF1-234ENST00000641012 EMILIN1Q9Y6C2 1016 aa13.69□□□□□ -0.22
MACF1-234ENST00000641012 DZIP1LQ8IYY4 767 aaKnown RBP13.68□□□□□ -0.22
MACF1-234ENST00000641012 CDCA7LQ96GN5 454 aa13.68□□□□□ -0.22
MACF1-234ENST00000641012 NCLP19338 710 aaKnown RBP13.68□□□□□ -0.22
MACF1-234ENST00000641012 USHBP1Q8N6Y0 703 aa13.68□□□□□ -0.22
MACF1-234ENST00000641012 CHRNA2Q15822 529 aa13.67□□□□□ -0.22
MACF1-234ENST00000641012 TSR2Q969E8 191 aaKnown RBP13.67□□□□□ -0.22
MACF1-234ENST00000641012 HSP90AB1P08238 724 aaKnown RBP13.66□□□□□ -0.22
MACF1-234ENST00000641012 ANKRD45Q5TZF3 282 aa13.66□□□□□ -0.22
MACF1-234ENST00000641012 C19orf44Q9H6X5 657 aa13.66□□□□□ -0.22
MACF1-234ENST00000641012 EXOSC9Q06265 439 aaKnown RBP13.66□□□□□ -0.22
MACF1-234ENST00000641012 RRP1P56182 461 aaKnown RBP13.66□□□□□ -0.22
MACF1-234ENST00000641012 HDGFL1Q5TGJ6 251 aa13.65□□□□□ -0.22
MACF1-234ENST00000641012 EXOC6Q8TAG9 804 aa13.65□□□□□ -0.22
MACF1-234ENST00000641012 SCAF11Q99590 1463 aaKnown RBP13.65□□□□□ -0.22
MACF1-234ENST00000641012 GOLGA6L22H0YM25 854 aa13.65□□□□□ -0.22
MACF1-234ENST00000641012 ERICH6BQ5W0A0 696 aa13.65□□□□□ -0.22
MACF1-234ENST00000641012 CRBNQ96SW2 442 aa13.65□□□□□ -0.22
MACF1-234ENST00000641012 FBLN1P23142 703 aa13.64□□□□□ -0.23
MACF1-234ENST00000641012 DDX19BQ9UMR2 479 aa13.64□□□□□ -0.23
MACF1-234ENST00000641012 KIF16BQ96L93 1317 aa13.64□□□□□ -0.23
MACF1-234ENST00000641012 LRPPRCP42704 1394 aaKnown RBP13.64□□□□□ -0.23
MACF1-234ENST00000641012 TULP1O00294 542 aaPredicted RBP13.64□□□□□ -0.23
MACF1-234ENST00000641012 TWISTNBQ3B726 338 aaPredicted RBP13.64□□□□□ -0.23
MACF1-234ENST00000641012 CCDC184Q52MB2 194 aa13.64□□□□□ -0.23
MACF1-234ENST00000641012 ZNF428Q96B54 188 aa13.64□□□□□ -0.23
MACF1-234ENST00000641012 CFAP44Q96MT7 982 aa13.64□□□□□ -0.23
MACF1-234ENST00000641012 TCOF1Q13428 1488 aaKnown RBP13.64□□□□□ -0.23
MACF1-234ENST00000641012 PNISRQ8TF01 805 aaKnown RBP13.64□□□□□ -0.23
MACF1-234ENST00000641012 YEATS2Q9ULM3 1422 aa13.64□□□□□ -0.23
MACF1-234ENST00000641012 FCHSD2O94868 740 aa13.64□□□□□ -0.23
MACF1-234ENST00000641012 CCDC30Q5VVM6 783 aa13.64□□□□□ -0.23
MACF1-234ENST00000641012 PPP1R1BQ9UD71 204 aaPredicted RBP13.64□□□□□ -0.23
MACF1-234ENST00000641012 TBX22Q9Y458 520 aa13.64□□□□□ -0.23
MACF1-234ENST00000641012 NEO1Q92859 1461 aa13.64□□□□□ -0.23
MACF1-234ENST00000641012 PTCD1O75127 700 aaKnown RBP13.63□□□□□ -0.23
MACF1-234ENST00000641012 NPHP3Q7Z494 1330 aa13.63□□□□□ -0.23
MACF1-234ENST00000641012 TOMM22Q9NS69 142 aa13.62□□□□□ -0.23
MACF1-234ENST00000641012 SAMD9Q5K651 1589 aa13.62□□□□□ -0.23
MACF1-234ENST00000641012 THUMPD2Q9BTF0 503 aaKnown RBP13.62□□□□□ -0.23
MACF1-234ENST00000641012 ATP7AQ04656 1500 aa13.62□□□□□ -0.23
MACF1-234ENST00000641012 RILPL2Q969X0 211 aa13.61□□□□□ -0.23
MACF1-234ENST00000641012 UHRF1BP1Q6BDS2 1440 aa13.61□□□□□ -0.23
MACF1-234ENST00000641012 VPS37DQ86XT2 251 aa13.61□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 118.1 ms