RNA–Protein interactions for RNA: ENST00000640900.1

SCARB2-225, Transcript of scavenger receptor class B member 2, humanhuman

TSL 2

Gene SCARB2, Length 531 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-225ENST00000640900 EIF3AQ14152 1382 aaKnown RBP12.89□□□□□ -0.35
SCARB2-225ENST00000640900 ST20-MTHFSA0A0A6YYL1 179 aa12.88□□□□□ -0.35
SCARB2-225ENST00000640900 NCOA3Q9Y6Q9 1424 aa12.88□□□□□ -0.35
SCARB2-225ENST00000640900 PLEKHH1Q9ULM0 1364 aa12.87□□□□□ -0.35
SCARB2-225ENST00000640900 STK26Q9P289 416 aa12.87□□□□□ -0.35
SCARB2-225ENST00000640900 CENPJQ9HC77 1338 aaPredicted RBP12.87□□□□□ -0.35
SCARB2-225ENST00000640900 WAPLQ7Z5K2 1190 aa12.86□□□□□ -0.35
SCARB2-225ENST00000640900 PRAM1Q96QH2 718 aa12.86□□□□□ -0.35
SCARB2-225ENST00000640900 LTBP4Q8N2S1 1624 aa12.86□□□□□ -0.35
SCARB2-225ENST00000640900 ADGRB2O60241 1585 aa12.86□□□□□ -0.35
SCARB2-225ENST00000640900 SIPA1L2Q9P2F8 1722 aaPredicted RBP12.85□□□□□ -0.35
SCARB2-225ENST00000640900 ZNF335Q9H4Z2 1342 aaPredicted RBP12.85□□□□□ -0.35
SCARB2-225ENST00000640900 QRICH2Q9H0J4 1663 aa12.84□□□□□ -0.35
SCARB2-225ENST00000640900 SLC24A1O60721 1099 aa12.84□□□□□ -0.35
SCARB2-225ENST00000640900 LRRC7Q96NW7 1537 aa12.83□□□□□ -0.35
SCARB2-225ENST00000640900 PUS7Q96PZ0 661 aaKnown RBP12.83□□□□□ -0.36
SCARB2-225ENST00000640900 ADGRL3Q9HAR2 1447 aa12.82□□□□□ -0.36
SCARB2-225ENST00000640900 C11orf95C9JLR9 678 aaPredicted RBP12.82□□□□□ -0.36
SCARB2-225ENST00000640900 XIRP1Q702N8 1843 aaKnown RBP12.82□□□□□ -0.36
SCARB2-225ENST00000640900 TULP4Q9NRJ4 1543 aa12.82□□□□□ -0.36
SCARB2-225ENST00000640900 NALCNQ8IZF0 1738 aa12.8□□□□□ -0.36
SCARB2-225ENST00000640900 POGKQ9P215 609 aa12.8□□□□□ -0.36
SCARB2-225ENST00000640900 TMEM94Q12767 1356 aa12.8□□□□□ -0.36
SCARB2-225ENST00000640900 DISP3Q9P2K9 1392 aa12.8□□□□□ -0.36
SCARB2-225ENST00000640900 CDC42BPGQ6DT37 1551 aa12.79□□□□□ -0.36
SCARB2-225ENST00000640900 PROSER2Q86WR7 435 aaPredicted RBP12.79□□□□□ -0.36
SCARB2-225ENST00000640900 HIRIP3Q9BW71 556 aaPredicted RBP12.79□□□□□ -0.36
SCARB2-225ENST00000640900 DCCP43146 1447 aa12.79□□□□□ -0.36
SCARB2-225ENST00000640900 WASLO00401 505 aaPredicted RBP12.78□□□□□ -0.36
SCARB2-225ENST00000640900 ZNF316A6NFI3 1004 aaPredicted RBP12.77□□□□□ -0.37
SCARB2-225ENST00000640900 TMF1P82094 1093 aa12.77□□□□□ -0.37
SCARB2-225ENST00000640900 C19orf44Q9H6X5 657 aa12.77□□□□□ -0.37
SCARB2-225ENST00000640900 KIF7Q2M1P5 1343 aa12.77□□□□□ -0.37
SCARB2-225ENST00000640900 WASHC2AQ641Q2 1341 aa12.77□□□□□ -0.37
SCARB2-225ENST00000640900 MINK1Q8N4C8 1332 aaPredicted RBP12.77□□□□□ -0.37
SCARB2-225ENST00000640900 CCDC7Q96M83 1385 aa12.77□□□□□ -0.37
SCARB2-225ENST00000640900 SAFB2Q14151 953 aaKnown RBP eCLIP12.76□□□□□ -0.37
SCARB2-225ENST00000640900 EVC2Q86UK5 1308 aa12.76□□□□□ -0.37
SCARB2-225ENST00000640900 CDK19Q9BWU1 502 aa12.75□□□□□ -0.37
SCARB2-225ENST00000640900 FMN2Q9NZ56 1722 aa12.75□□□□□ -0.37
SCARB2-225ENST00000640900 USP32Q8NFA0 1604 aa12.74□□□□□ -0.37
SCARB2-225ENST00000640900 ATP7BP35670 1465 aa12.74□□□□□ -0.37
SCARB2-225ENST00000640900 IQSEC2Q5JU85 1478 aa12.74□□□□□ -0.37
SCARB2-225ENST00000640900 ANKARQ7Z5J8 1434 aa12.74□□□□□ -0.37
SCARB2-225ENST00000640900 PRR36Q9H6K5 1346 aa12.74□□□□□ -0.37
SCARB2-225ENST00000640900 CDCA8Q53HL2 280 aa12.74□□□□□ -0.37
SCARB2-225ENST00000640900 RBM33Q96EV2 1170 aaKnown RBP12.74□□□□□ -0.37
SCARB2-225ENST00000640900 ATAD2Q6PL18 1390 aa12.72□□□□□ -0.37
SCARB2-225ENST00000640900 TOPAZ1Q8N9V7 1692 aa12.72□□□□□ -0.37
SCARB2-225ENST00000640900 MST1RQ04912 1400 aa12.71□□□□□ -0.37
SCARB2-225ENST00000640900 MSH6P52701 1360 aa12.71□□□□□ -0.37
SCARB2-225ENST00000640900 NINLQ9Y2I6 1382 aa12.71□□□□□ -0.37
SCARB2-225ENST00000640900 MYOM1P52179 1685 aa12.71□□□□□ -0.37
SCARB2-225ENST00000640900 PLEKHG3A1L390 1219 aa12.7□□□□□ -0.38
SCARB2-225ENST00000640900 CADPS2Q86UW7 1296 aa12.7□□□□□ -0.38
SCARB2-225ENST00000640900 NUDT16Q96DE0 195 aaKnown RBP12.7□□□□□ -0.38
SCARB2-225ENST00000640900 CABP2Q9NPB3 220 aa12.7□□□□□ -0.38
SCARB2-225ENST00000640900 CCDC61Q9Y6R9 512 aa12.7□□□□□ -0.38
SCARB2-225ENST00000640900 CD163L1Q9NR16 1453 aa12.7□□□□□ -0.38
SCARB2-225ENST00000640900 C1orf167Q5SNV9 1468 aa12.69□□□□□ -0.38
SCARB2-225ENST00000640900 CPSF1Q10570 1443 aaKnown RBP12.68□□□□□ -0.38
SCARB2-225ENST00000640900 POLR3AO14802 1390 aaPredicted RBP12.68□□□□□ -0.38
SCARB2-225ENST00000640900 RGPD8O14715 1765 aaPredicted RBP12.67□□□□□ -0.38
SCARB2-225ENST00000640900 SRPK2P78362 688 aaKnown RBP12.67□□□□□ -0.38
SCARB2-225ENST00000640900 ITSN1Q15811 1721 aa12.66□□□□□ -0.38
SCARB2-225ENST00000640900 ATF3P18847 181 aa12.66□□□□□ -0.38
SCARB2-225ENST00000640900 C14orf37Q86TY3 774 aa12.66□□□□□ -0.38
SCARB2-225ENST00000640900 SLC12A5Q9H2X9 1139 aa12.66□□□□□ -0.38
SCARB2-225ENST00000640900 PPIP5K1Q6PFW1 1433 aa12.65□□□□□ -0.38
SCARB2-225ENST00000640900 PER1O15534 1290 aaPredicted RBP12.65□□□□□ -0.38
SCARB2-225ENST00000640900 CERKQ8TCT0 537 aa12.65□□□□□ -0.38
SCARB2-225ENST00000640900 CABP1Q9NZU7 370 aa12.65□□□□□ -0.38
SCARB2-225ENST00000640900 ANKRD36BQ8N2N9 1353 aa12.65□□□□□ -0.38
SCARB2-225ENST00000640900 SSH2Q76I76 1423 aa12.64□□□□□ -0.39
SCARB2-225ENST00000640900 SLAIN2Q9P270 581 aa12.64□□□□□ -0.39
SCARB2-225ENST00000640900 CARD14Q9BXL6 1004 aa12.63□□□□□ -0.39
SCARB2-225ENST00000640900 KIF1AQ12756 1690 aa12.63□□□□□ -0.39
SCARB2-225ENST00000640900 AKAP12Q02952 1782 aa12.63□□□□□ -0.39
SCARB2-225ENST00000640900 A0A1W2PP64 1363 aa12.62□□□□□ -0.39
SCARB2-225ENST00000640900 BRD4O60885 1362 aaPredicted RBP12.62□□□□□ -0.39
SCARB2-225ENST00000640900 ORAI2Q96SN7 254 aa12.62□□□□□ -0.39
SCARB2-225ENST00000640900 FOXD4L1Q9NU39 408 aa12.62□□□□□ -0.39
SCARB2-225ENST00000640900 PHF8Q9UPP1 1060 aa12.62□□□□□ -0.39
SCARB2-225ENST00000640900 ACEP12821 1306 aa12.62□□□□□ -0.39
SCARB2-225ENST00000640900 NUTM2FA1L443 756 aa12.61□□□□□ -0.39
SCARB2-225ENST00000640900 BRINP3Q76B58 766 aa12.61□□□□□ -0.39
SCARB2-225ENST00000640900 ZNF692Q9BU19 519 aaPredicted RBP12.61□□□□□ -0.39
SCARB2-225ENST00000640900 PANK3Q9H999 370 aa12.61□□□□□ -0.39
SCARB2-225ENST00000640900 MON2Q7Z3U7 1717 aa12.61□□□□□ -0.39
SCARB2-225ENST00000640900 NPC1L1Q9UHC9 1359 aa12.6□□□□□ -0.39
SCARB2-225ENST00000640900 DDX10Q13206 875 aaKnown RBP12.6□□□□□ -0.39
SCARB2-225ENST00000640900 TERF2IPQ9NYB0 399 aa12.6□□□□□ -0.39
SCARB2-225ENST00000640900 USP6P35125 1406 aa12.6□□□□□ -0.39
SCARB2-225ENST00000640900 NRKQ7Z2Y5 1582 aa12.6□□□□□ -0.39
SCARB2-225ENST00000640900 ESCO1Q5FWF5 840 aa12.59□□□□□ -0.39
SCARB2-225ENST00000640900 EDC4Q6P2E9 1401 aaKnown RBP12.59□□□□□ -0.39
SCARB2-225ENST00000640900 AMER1Q5JTC6 1135 aaPredicted RBP12.58□□□□□ -0.4
SCARB2-225ENST00000640900 TMC1Q8TDI8 760 aa12.58□□□□□ -0.4
SCARB2-225ENST00000640900 NHSL1Q5SYE7 1610 aa12.58□□□□□ -0.4
SCARB2-225ENST00000640900 PXDNQ92626 1479 aa12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 71.4 ms