RNA–Protein interactions for RNA: ENST00000640736.1

RTTN-221, Transcript of rotatin, humanhuman

TSL 5

Gene RTTN, Length 1,132 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTTN-221ENST00000640736 CNKSR2Q8WXI2 1034 aa20.29■□□□□ 0.84
RTTN-221ENST00000640736 TECPR2O15040 1411 aa20.28■□□□□ 0.84
RTTN-221ENST00000640736 POTEAQ6S8J7 498 aa20.28■□□□□ 0.84
RTTN-221ENST00000640736 NRXN1Q9ULB1 1477 aa20.28■□□□□ 0.84
RTTN-221ENST00000640736 YTHDC2Q9H6S0 1430 aaKnown RBP20.27■□□□□ 0.84
RTTN-221ENST00000640736 LAMC1P11047 1609 aa20.27■□□□□ 0.84
RTTN-221ENST00000640736 CDC42BPGQ6DT37 1551 aa20.27■□□□□ 0.84
RTTN-221ENST00000640736 HRCP23327 699 aa20.27■□□□□ 0.84
RTTN-221ENST00000640736 ORAI2Q96SN7 254 aa20.27■□□□□ 0.84
RTTN-221ENST00000640736 ABCC11Q96J66 1382 aa20.26■□□□□ 0.83
RTTN-221ENST00000640736 PLEKHH1Q9ULM0 1364 aa20.26■□□□□ 0.83
RTTN-221ENST00000640736 NUTM2BA6NNL0 878 aaPredicted RBP20.26■□□□□ 0.83
RTTN-221ENST00000640736 NUTM2EB1AL46 878 aaPredicted RBP20.26■□□□□ 0.83
RTTN-221ENST00000640736 CFAP70Q5T0N1 1121 aa20.26■□□□□ 0.83
RTTN-221ENST00000640736 NUTM2AQ8IVF1 878 aaPredicted RBP20.26■□□□□ 0.83
RTTN-221ENST00000640736 C14orf93Q9H972 538 aaKnown RBP20.26■□□□□ 0.83
RTTN-221ENST00000640736 LRRC59Q96AG4 307 aaKnown RBP20.25■□□□□ 0.83
RTTN-221ENST00000640736 DHX57Q6P158 1386 aaKnown RBP20.21■□□□□ 0.83
RTTN-221ENST00000640736 NUTM2FA1L443 756 aa20.21■□□□□ 0.83
RTTN-221ENST00000640736 ESCO1Q5FWF5 840 aa20.21■□□□□ 0.83
RTTN-221ENST00000640736 KDM2AQ9Y2K7 1162 aa20.21■□□□□ 0.83
RTTN-221ENST00000640736 PNPLA6Q8IY17 1366 aa20.21■□□□□ 0.83
RTTN-221ENST00000640736 FMN2Q9NZ56 1722 aa20.19■□□□□ 0.82
RTTN-221ENST00000640736 DCAF11Q8TEB1 546 aa20.19■□□□□ 0.82
RTTN-221ENST00000640736 SOS2Q07890 1332 aaPredicted RBP20.18■□□□□ 0.82
RTTN-221ENST00000640736 RGPD8O14715 1765 aaPredicted RBP20.16■□□□□ 0.82
RTTN-221ENST00000640736 SAFB2Q14151 953 aaKnown RBP eCLIP20.16■□□□□ 0.82
RTTN-221ENST00000640736 ZNF772Q68DY9 489 aaPredicted RBP20.16■□□□□ 0.82
RTTN-221ENST00000640736 SIRT1Q96EB6 747 aa20.16■□□□□ 0.82
RTTN-221ENST00000640736 PRAM1Q96QH2 718 aa20.15■□□□□ 0.82
RTTN-221ENST00000640736 NPHP3Q7Z494 1330 aa20.15■□□□□ 0.82
RTTN-221ENST00000640736 ADGRB1O14514 1584 aa20.15■□□□□ 0.82
RTTN-221ENST00000640736 XPCQ01831 940 aaPredicted RBP20.14■□□□□ 0.81
RTTN-221ENST00000640736 DLC1Q96QB1 1528 aa20.13■□□□□ 0.81
RTTN-221ENST00000640736 AFF2P51816 1311 aa20.13■□□□□ 0.81
RTTN-221ENST00000640736 FOXO3O43524 673 aa20.13■□□□□ 0.81
RTTN-221ENST00000640736 POGKQ9P215 609 aa20.13■□□□□ 0.81
RTTN-221ENST00000640736 PXDNQ92626 1479 aa20.12■□□□□ 0.81
RTTN-221ENST00000640736 HOXD11P31277 338 aaPredicted RBP20.12■□□□□ 0.81
RTTN-221ENST00000640736 C8orf37Q96NL8 207 aa20.12■□□□□ 0.81
RTTN-221ENST00000640736 KIF1AQ12756 1690 aa20.12■□□□□ 0.81
RTTN-221ENST00000640736 ADAMTS2O95450 1211 aa20.11■□□□□ 0.81
RTTN-221ENST00000640736 TRAK1Q9UPV9 953 aa20.11■□□□□ 0.81
RTTN-221ENST00000640736 COL22A1Q8NFW1 1626 aaPredicted RBP20.1■□□□□ 0.81
RTTN-221ENST00000640736 STAC3Q96MF2 364 aa20.1■□□□□ 0.81
RTTN-221ENST00000640736 ADGRB2O60241 1585 aa20.06■□□□□ 0.8
RTTN-221ENST00000640736 NGLY1Q96IV0 654 aa20.06■□□□□ 0.8
RTTN-221ENST00000640736 ARHGEF28Q8N1W1 1705 aaKnown RBP20.05■□□□□ 0.8
RTTN-221ENST00000640736 RXRBP28702 533 aa20.05■□□□□ 0.8
RTTN-221ENST00000640736 HIRIP3Q9BW71 556 aaPredicted RBP20.05■□□□□ 0.8
RTTN-221ENST00000640736 PHF8Q9UPP1 1060 aa20.05■□□□□ 0.8
RTTN-221ENST00000640736 USP32Q8NFA0 1604 aa20.05■□□□□ 0.8
RTTN-221ENST00000640736 MINK1Q8N4C8 1332 aaPredicted RBP20.04■□□□□ 0.8
RTTN-221ENST00000640736 NCBP3Q53F19 620 aaKnown RBP20.04■□□□□ 0.8
RTTN-221ENST00000640736 RNF216Q9NWF9 866 aaPredicted RBP20.04■□□□□ 0.8
RTTN-221ENST00000640736 MARF1Q9Y4F3 1742 aaKnown RBP20.04■□□□□ 0.8
RTTN-221ENST00000640736 KRT28Q7Z3Y7 464 aa20.03■□□□□ 0.8
RTTN-221ENST00000640736 QTRT2Q9H974 415 aaKnown RBP20.02■□□□□ 0.8
RTTN-221ENST00000640736 KIAA1210Q9ULL0 1709 aa20.01■□□□□ 0.79
RTTN-221ENST00000640736 ANKARQ7Z5J8 1434 aa20.01■□□□□ 0.79
RTTN-221ENST00000640736 SPATA31A3Q5VYP0 1347 aa20.01■□□□□ 0.79
RTTN-221ENST00000640736 PMFBP1Q8TBY8 1022 aa20■□□□□ 0.79
RTTN-221ENST00000640736 PSME1Q06323 249 aa19.98■□□□□ 0.79
RTTN-221ENST00000640736 USP21Q9UK80 565 aa19.98■□□□□ 0.79
RTTN-221ENST00000640736 CDK12Q9NYV4 1490 aaPredicted RBP19.98■□□□□ 0.79
RTTN-221ENST00000640736 TULP4Q9NRJ4 1543 aa19.97■□□□□ 0.79
RTTN-221ENST00000640736 TNS3Q68CZ2 1445 aa19.97■□□□□ 0.79
RTTN-221ENST00000640736 WASLO00401 505 aaPredicted RBP19.97■□□□□ 0.79
RTTN-221ENST00000640736 RBM6P78332 1123 aaKnown RBP19.97■□□□□ 0.79
RTTN-221ENST00000640736 EIF3AQ14152 1382 aaKnown RBP19.96■□□□□ 0.79
RTTN-221ENST00000640736 PLEKHG5O94827 1062 aa19.96■□□□□ 0.79
RTTN-221ENST00000640736 PRR36Q9H6K5 1346 aa19.96■□□□□ 0.79
RTTN-221ENST00000640736 LMOD2Q6P5Q4 547 aa19.95■□□□□ 0.78
RTTN-221ENST00000640736 FNBP4Q8N3X1 1017 aaPredicted RBP19.95■□□□□ 0.78
RTTN-221ENST00000640736 SIN3AQ96ST3 1273 aa19.95■□□□□ 0.78
RTTN-221ENST00000640736 RGS12O14924 1447 aa19.94■□□□□ 0.78
RTTN-221ENST00000640736 NBPF1Q3BBV0 1214 aa19.94■□□□□ 0.78
RTTN-221ENST00000640736 SBNO1A3KN83 1393 aa19.94■□□□□ 0.78
RTTN-221ENST00000640736 ITSN1Q15811 1721 aa19.93■□□□□ 0.78
RTTN-221ENST00000640736 HAP1P54257 671 aaPredicted RBP19.93■□□□□ 0.78
RTTN-221ENST00000640736 TRPC5Q9UL62 973 aaPredicted RBP19.93■□□□□ 0.78
RTTN-221ENST00000640736 TRPM3Q9HCF6 1732 aaPredicted RBP19.93■□□□□ 0.78
RTTN-221ENST00000640736 ABCA3Q99758 1704 aa19.92■□□□□ 0.78
RTTN-221ENST00000640736 NEUROD1Q13562 356 aa19.91■□□□□ 0.78
RTTN-221ENST00000640736 CABLES1Q8TDN4 633 aa19.91■□□□□ 0.78
RTTN-221ENST00000640736 L3MBTL2Q969R5 705 aa19.91■□□□□ 0.78
RTTN-221ENST00000640736 ATRNO75882 1429 aa19.91■□□□□ 0.78
RTTN-221ENST00000640736 ARHGEF10O15013 1369 aa19.9■□□□□ 0.78
RTTN-221ENST00000640736 GPRASP1Q5JY77 1395 aa19.9■□□□□ 0.78
RTTN-221ENST00000640736 BCL9LQ86UU0 1499 aa19.9■□□□□ 0.78
RTTN-221ENST00000640736 ATP7BP35670 1465 aa19.89■□□□□ 0.77
RTTN-221ENST00000640736 NGDNQ8NEJ9 315 aaKnown RBP19.89■□□□□ 0.77
RTTN-221ENST00000640736 UPF1Q92900 1129 aaKnown RBP eCLIP19.89■□□□□ 0.77
RTTN-221ENST00000640736 TNKS1BP1Q9C0C2 1729 aaKnown RBP19.88■□□□□ 0.77
RTTN-221ENST00000640736 ALS2Q96Q42 1657 aa19.88■□□□□ 0.77
RTTN-221ENST00000640736 NUDT16Q96DE0 195 aaKnown RBP19.88■□□□□ 0.77
RTTN-221ENST00000640736 CDK19Q9BWU1 502 aa19.88■□□□□ 0.77
RTTN-221ENST00000640736 PLCH1Q4KWH8 1693 aa19.86■□□□□ 0.77
RTTN-221ENST00000640736 SLIT2O94813 1529 aa19.86■□□□□ 0.77
RTTN-221ENST00000640736 TOPAZ1Q8N9V7 1692 aa19.85■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms