RNA–Protein interactions for RNA: ENST00000640654.1

RTTN-220, Transcript of rotatin, humanhuman

TSL 5

Gene RTTN, Length 982 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTTN-220ENST00000640654 WNT7AO00755 349 aa9.31□□□□□ -0.92
RTTN-220ENST00000640654 FECHP22830 423 aa9.31□□□□□ -0.92
RTTN-220ENST00000640654 Q3C1V9 767 aa9.31□□□□□ -0.92
RTTN-220ENST00000640654 SNIP1Q8TAD8 396 aaKnown RBP9.31□□□□□ -0.92
RTTN-220ENST00000640654 TESPA1A2RU30 521 aaPredicted RBP9.29□□□□□ -0.92
RTTN-220ENST00000640654 NLRP7Q8WX94 980 aa9.29□□□□□ -0.92
RTTN-220ENST00000640654 REPIN1Q9BWE0 567 aaKnown RBP9.29□□□□□ -0.92
RTTN-220ENST00000640654 SENP2Q9HC62 589 aa9.29□□□□□ -0.92
RTTN-220ENST00000640654 NFX1Q12986 1120 aaKnown RBP9.28□□□□□ -0.92
RTTN-220ENST00000640654 TRIM32Q13049 653 aa9.28□□□□□ -0.92
RTTN-220ENST00000640654 RNF19BQ6ZMZ0 732 aa9.28□□□□□ -0.92
RTTN-220ENST00000640654 ATP13A2Q9NQ11 1180 aa9.28□□□□□ -0.92
RTTN-220ENST00000640654 WIPF1O43516 503 aa9.27□□□□□ -0.93
RTTN-220ENST00000640654 SMPD1P17405 629 aa9.26□□□□□ -0.93
RTTN-220ENST00000640654 KIFC2Q96AC6 838 aa9.25□□□□□ -0.93
RTTN-220ENST00000640654 MRGPRX2Q96LB1 330 aa9.25□□□□□ -0.93
RTTN-220ENST00000640654 GPR37O15354 613 aa9.24□□□□□ -0.93
RTTN-220ENST00000640654 MMP16P51512 607 aa9.24□□□□□ -0.93
RTTN-220ENST00000640654 TRIM47Q96LD4 638 aa9.24□□□□□ -0.93
RTTN-220ENST00000640654 TERTO14746 1132 aaKnown RBP9.22□□□□□ -0.93
RTTN-220ENST00000640654 GPIHBP1Q8IV16 184 aa9.22□□□□□ -0.93
RTTN-220ENST00000640654 USB1Q9BQ65 265 aaKnown RBP9.22□□□□□ -0.93
RTTN-220ENST00000640654 J3QL48 77 aa9.21□□□□□ -0.94
RTTN-220ENST00000640654 SNRPBP14678 240 aaKnown RBP9.21□□□□□ -0.94
RTTN-220ENST00000640654 CCDC24Q8N4L8 307 aa9.21□□□□□ -0.94
RTTN-220ENST00000640654 PHOX2BQ99453 314 aa9.21□□□□□ -0.94
RTTN-220ENST00000640654 DXOO77932 396 aaKnown RBP9.2□□□□□ -0.94
RTTN-220ENST00000640654 KDM4AO75164 1064 aa9.19□□□□□ -0.94
RTTN-220ENST00000640654 CD46P15529 392 aa9.18□□□□□ -0.94
RTTN-220ENST00000640654 WNT7BP56706 349 aa9.18□□□□□ -0.94
RTTN-220ENST00000640654 USP46P62068 366 aa9.18□□□□□ -0.94
RTTN-220ENST00000640654 SLC16A10Q8TF71 515 aa9.18□□□□□ -0.94
RTTN-220ENST00000640654 HPS1Q92902 700 aa9.18□□□□□ -0.94
RTTN-220ENST00000640654 FAM181BA6NEQ2 426 aa9.17□□□□□ -0.94
RTTN-220ENST00000640654 RC3H1Q5TC82 1133 aaKnown RBP9.17□□□□□ -0.94
RTTN-220ENST00000640654 ALDH1A1P00352 501 aa9.14□□□□□ -0.95
RTTN-220ENST00000640654 SKOR1P84550 965 aa9.12□□□□□ -0.95
RTTN-220ENST00000640654 JUNDP17535 347 aa9.11□□□□□ -0.95
RTTN-220ENST00000640654 MAP2K5Q13163 448 aa9.11□□□□□ -0.95
RTTN-220ENST00000640654 EHBP1Q8NDI1 1231 aa9.11□□□□□ -0.95
RTTN-220ENST00000640654 WASF2Q9Y6W5 498 aa9.11□□□□□ -0.95
RTTN-220ENST00000640654 HOXA2O43364 376 aa9.1□□□□□ -0.95
RTTN-220ENST00000640654 NXF1Q9UBU9 619 aaKnown RBP9.1□□□□□ -0.95
RTTN-220ENST00000640654 TULP1O00294 542 aaPredicted RBP9.09□□□□□ -0.95
RTTN-220ENST00000640654 MDM2Q00987 491 aaPredicted RBP9.09□□□□□ -0.95
RTTN-220ENST00000640654 LCE2CQ5TA81 110 aa9.09□□□□□ -0.95
RTTN-220ENST00000640654 NPAS3Q8IXF0 933 aa9.08□□□□□ -0.96
RTTN-220ENST00000640654 IRF7Q92985 503 aa9.08□□□□□ -0.96
RTTN-220ENST00000640654 HLA-CQ95604 372 aa9.08□□□□□ -0.96
RTTN-220ENST00000640654 NUDT12Q9BQG2 462 aa9.08□□□□□ -0.96
RTTN-220ENST00000640654 CAPN5O15484 640 aaPredicted RBP9.07□□□□□ -0.96
RTTN-220ENST00000640654 RETREG3Q86VR2 466 aa9.06□□□□□ -0.96
RTTN-220ENST00000640654 NUTM1Q86Y26 1132 aa9.06□□□□□ -0.96
RTTN-220ENST00000640654 BMP1P13497 986 aa9.05□□□□□ -0.96
RTTN-220ENST00000640654 IRF6O14896 467 aa9.04□□□□□ -0.96
RTTN-220ENST00000640654 GUCA2AQ02747 115 aa9.04□□□□□ -0.96
RTTN-220ENST00000640654 ZSCAN1Q8NBB4 408 aa9.04□□□□□ -0.96
RTTN-220ENST00000640654 MINK1Q8N4C8 1332 aaPredicted RBP9.04□□□□□ -0.96
RTTN-220ENST00000640654 CLCN1P35523 988 aa9.03□□□□□ -0.96
RTTN-220ENST00000640654 GMPRP36959 345 aa9.03□□□□□ -0.96
RTTN-220ENST00000640654 KRI1Q8N9T8 703 aaKnown RBP9.03□□□□□ -0.96
RTTN-220ENST00000640654 GPCPD1Q9NPB8 672 aa9.03□□□□□ -0.96
RTTN-220ENST00000640654 SIAH2O43255 324 aa9.02□□□□□ -0.97
RTTN-220ENST00000640654 TRIM46Q7Z4K8 759 aa9.02□□□□□ -0.97
RTTN-220ENST00000640654 SYMPKQ92797 1274 aaKnown RBP9.02□□□□□ -0.97
RTTN-220ENST00000640654 CCNYL3P0C7X3 344 aa9.01□□□□□ -0.97
RTTN-220ENST00000640654 MS4A1P11836 297 aa9.01□□□□□ -0.97
RTTN-220ENST00000640654 C6orf229H3BNL8 230 aa9□□□□□ -0.97
RTTN-220ENST00000640654 PLCB2Q00722 1185 aa9□□□□□ -0.97
RTTN-220ENST00000640654 PLEKHG3A1L390 1219 aa8.99□□□□□ -0.97
RTTN-220ENST00000640654 H3BM21 787 aa8.99□□□□□ -0.97
RTTN-220ENST00000640654 FDX1P10109 184 aa8.99□□□□□ -0.97
RTTN-220ENST00000640654 PTCRAQ6ISU1 281 aaPredicted RBP8.99□□□□□ -0.97
RTTN-220ENST00000640654 CCDC102AQ96A19 550 aa8.99□□□□□ -0.97
RTTN-220ENST00000640654 FAM217BQ9NTX9 383 aaPredicted RBP8.99□□□□□ -0.97
RTTN-220ENST00000640654 VEGFBP49765 207 aa8.98□□□□□ -0.97
RTTN-220ENST00000640654 SH3BP2P78314 561 aa8.98□□□□□ -0.97
RTTN-220ENST00000640654 SCARF1Q14162 830 aa8.98□□□□□ -0.97
RTTN-220ENST00000640654 PTPRNQ16849 979 aa8.97□□□□□ -0.97
RTTN-220ENST00000640654 ZFP42Q96MM3 310 aa8.96□□□□□ -0.98
RTTN-220ENST00000640654 UNC93B1Q9H1C4 597 aa8.96□□□□□ -0.98
RTTN-220ENST00000640654 LINC01559Q495D7 138 aa8.95□□□□□ -0.98
RTTN-220ENST00000640654 TLL2Q9Y6L7 1015 aa8.95□□□□□ -0.98
RTTN-220ENST00000640654 VARSP26640 1264 aaKnown RBP8.94□□□□□ -0.98
RTTN-220ENST00000640654 NNTQ13423 1086 aa8.94□□□□□ -0.98
RTTN-220ENST00000640654 MRPL14Q6P1L8 145 aaKnown RBP8.93□□□□□ -0.98
RTTN-220ENST00000640654 EVA1BQ9NVM1 165 aa8.93□□□□□ -0.98
RTTN-220ENST00000640654 ERBB4Q15303 1308 aa8.92□□□□□ -0.98
RTTN-220ENST00000640654 ADH1CP00326 375 aa8.92□□□□□ -0.98
RTTN-220ENST00000640654 KCNH2Q12809 1159 aa8.92□□□□□ -0.98
RTTN-220ENST00000640654 ZNF511Q8NB15 262 aa8.92□□□□□ -0.98
RTTN-220ENST00000640654 BAP1Q92560 729 aa8.92□□□□□ -0.98
RTTN-220ENST00000640654 HAP1P54257 671 aaPredicted RBP8.91□□□□□ -0.98
RTTN-220ENST00000640654 MPNDQ8N594 471 aa8.91□□□□□ -0.98
RTTN-220ENST00000640654 PCDHGC3Q9UN70 934 aa8.91□□□□□ -0.98
RTTN-220ENST00000640654 SPDYE5A6NIY4 337 aa8.9□□□□□ -0.98
RTTN-220ENST00000640654 LORP23490 312 aaPredicted RBP8.9□□□□□ -0.98
RTTN-220ENST00000640654 PRR7Q8TB68 274 aa8.9□□□□□ -0.98
RTTN-220ENST00000640654 PURBQ96QR8 312 aaKnown RBP8.9□□□□□ -0.98
RTTN-220ENST00000640654 WDR4P57081 412 aaKnown RBP8.89□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms