RNA–Protein interactions for RNA: ENST00000640648.1

NECAP1-227, Transcript of NECAP endocytosis associated 1, humanhuman

TSL 5

Gene NECAP1, Length 5,166 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP1-227ENST00000640648 E9PSI1 815 aa9.99□□□□□ -0.81
NECAP1-227ENST00000640648 FOXD4L5Q5VV16 416 aaPredicted RBP9.99□□□□□ -0.81
NECAP1-227ENST00000640648 PAXIP1Q6ZW49 1069 aaPredicted RBP9.99□□□□□ -0.81
NECAP1-227ENST00000640648 STK11IPQ8N1F8 1099 aa9.99□□□□□ -0.81
NECAP1-227ENST00000640648 FOXD4L4Q8WXT5 416 aaPredicted RBP9.99□□□□□ -0.81
NECAP1-227ENST00000640648 EFCC1Q9HA90 598 aa9.99□□□□□ -0.81
NECAP1-227ENST00000640648 TUBB4AP04350 444 aa9.98□□□□□ -0.81
NECAP1-227ENST00000640648 CWC22Q9HCG8 908 aaKnown RBP9.98□□□□□ -0.81
NECAP1-227ENST00000640648 TTLL5Q6EMB2 1281 aa9.98□□□□□ -0.81
NECAP1-227ENST00000640648 CCDC112Q8NEF3 446 aa9.98□□□□□ -0.81
NECAP1-227ENST00000640648 SPAG9O60271 1321 aaKnown RBP9.98□□□□□ -0.81
NECAP1-227ENST00000640648 POLR3GO15318 223 aaPredicted RBP9.98□□□□□ -0.81
NECAP1-227ENST00000640648 TDO2P48775 406 aa9.98□□□□□ -0.81
NECAP1-227ENST00000640648 CCDC34Q96HJ3 373 aa9.98□□□□□ -0.81
NECAP1-227ENST00000640648 TEX2Q8IWB9 1127 aa9.97□□□□□ -0.81
NECAP1-227ENST00000640648 RTF1Q92541 710 aaKnown RBP9.97□□□□□ -0.81
NECAP1-227ENST00000640648 OGFRQ9NZT2 677 aa9.97□□□□□ -0.81
NECAP1-227ENST00000640648 ZHX1Q9UKY1 873 aaPredicted RBP9.97□□□□□ -0.81
NECAP1-227ENST00000640648 MYCBPQ99417 103 aaPredicted RBP9.97□□□□□ -0.81
NECAP1-227ENST00000640648 NCOA2Q15596 1464 aa9.97□□□□□ -0.81
NECAP1-227ENST00000640648 V9GYY5 206 aaPredicted RBP9.97□□□□□ -0.81
NECAP1-227ENST00000640648 DMTNQ08495 405 aa9.97□□□□□ -0.81
NECAP1-227ENST00000640648 H0YHG0 523 aa9.96□□□□□ -0.81
NECAP1-227ENST00000640648 KRT222Q8N1A0 295 aa9.96□□□□□ -0.81
NECAP1-227ENST00000640648 GOLGA6L10A6NI86 522 aa9.96□□□□□ -0.81
NECAP1-227ENST00000640648 SLC4A10Q6U841 1118 aa9.96□□□□□ -0.81
NECAP1-227ENST00000640648 SUGP2Q8IX01 1082 aaKnown RBP eCLIP9.96□□□□□ -0.81
NECAP1-227ENST00000640648 CEP120Q8N960 986 aa9.96□□□□□ -0.81
NECAP1-227ENST00000640648 ADAMTS8Q9UP79 889 aa9.96□□□□□ -0.81
NECAP1-227ENST00000640648 RSPH4AQ5TD94 716 aa9.96□□□□□ -0.82
NECAP1-227ENST00000640648 HMMRO75330 724 aa9.96□□□□□ -0.82
NECAP1-227ENST00000640648 KIAA1328Q86T90 577 aa9.96□□□□□ -0.82
NECAP1-227ENST00000640648 ANKRD45Q5TZF3 282 aa9.95□□□□□ -0.82
NECAP1-227ENST00000640648 PANK1Q8TE04 598 aa9.95□□□□□ -0.82
NECAP1-227ENST00000640648 GOLGA6L19H0YKK7 550 aa9.95□□□□□ -0.82
NECAP1-227ENST00000640648 ZKSCAN2Q63HK3 967 aa9.95□□□□□ -0.82
NECAP1-227ENST00000640648 ERLIN1O75477 346 aa9.95□□□□□ -0.82
NECAP1-227ENST00000640648 BMS1Q14692 1282 aaKnown RBP9.95□□□□□ -0.82
NECAP1-227ENST00000640648 UVSSAQ2YD98 709 aa9.95□□□□□ -0.82
NECAP1-227ENST00000640648 NOC3LQ8WTT2 800 aaKnown RBP9.95□□□□□ -0.82
NECAP1-227ENST00000640648 TSPY26PQ9H489 355 aa9.95□□□□□ -0.82
NECAP1-227ENST00000640648 RASSF4Q9H2L5 321 aa9.95□□□□□ -0.82
NECAP1-227ENST00000640648 BRMS1Q9HCU9 246 aa9.95□□□□□ -0.82
NECAP1-227ENST00000640648 INCENPQ9NQS7 918 aa9.95□□□□□ -0.82
NECAP1-227ENST00000640648 CFTRP13569 1480 aa9.95□□□□□ -0.82
NECAP1-227ENST00000640648 MCM2P49736 904 aa9.94□□□□□ -0.82
NECAP1-227ENST00000640648 TRIM6-TRIM34B2RNG4 842 aa9.94□□□□□ -0.82
NECAP1-227ENST00000640648 PRXQ9BXM0 1461 aa9.94□□□□□ -0.82
NECAP1-227ENST00000640648 KIAA0754O94854 1291 aa9.94□□□□□ -0.82
NECAP1-227ENST00000640648 TERF2IPQ9NYB0 399 aa9.94□□□□□ -0.82
NECAP1-227ENST00000640648 CASKIN1Q8WXD9 1431 aa9.94□□□□□ -0.82
NECAP1-227ENST00000640648 FOXD4L6Q3SYB3 417 aaPredicted RBP9.94□□□□□ -0.82
NECAP1-227ENST00000640648 FOXD4L3Q6VB84 417 aaPredicted RBP9.94□□□□□ -0.82
NECAP1-227ENST00000640648 GBP3Q9H0R5 595 aa9.94□□□□□ -0.82
NECAP1-227ENST00000640648 PAXBP1Q9Y5B6 917 aa9.94□□□□□ -0.82
NECAP1-227ENST00000640648 TULP1O00294 542 aaPredicted RBP9.93□□□□□ -0.82
NECAP1-227ENST00000640648 ERICH3Q5RHP9 1530 aa9.93□□□□□ -0.82
NECAP1-227ENST00000640648 HDAC5Q9UQL6 1122 aa9.93□□□□□ -0.82
NECAP1-227ENST00000640648 NEMFO60524 1076 aa9.93□□□□□ -0.82
NECAP1-227ENST00000640648 ZRSR2Q15696 482 aaKnown RBP9.93□□□□□ -0.82
NECAP1-227ENST00000640648 PNISRQ8TF01 805 aaKnown RBP9.93□□□□□ -0.82
NECAP1-227ENST00000640648 PSMD1Q99460 953 aa9.93□□□□□ -0.82
NECAP1-227ENST00000640648 NUTM2FA1L443 756 aa9.92□□□□□ -0.82
NECAP1-227ENST00000640648 BRD4O60885 1362 aaPredicted RBP9.92□□□□□ -0.82
NECAP1-227ENST00000640648 TUBB4BP68371 445 aa9.92□□□□□ -0.82
NECAP1-227ENST00000640648 GAPVD1Q14C86 1478 aa9.92□□□□□ -0.82
NECAP1-227ENST00000640648 CBX1P83916 185 aa9.92□□□□□ -0.82
NECAP1-227ENST00000640648 HSP90AB3PQ58FF7 597 aa9.92□□□□□ -0.82
NECAP1-227ENST00000640648 NUTM1Q86Y26 1132 aa9.92□□□□□ -0.82
NECAP1-227ENST00000640648 SARNPP82979 210 aaKnown RBP9.91□□□□□ -0.82
NECAP1-227ENST00000640648 FILIP1Q7Z7B0 1213 aa9.91□□□□□ -0.82
NECAP1-227ENST00000640648 AEBP1Q8IUX7 1158 aa9.91□□□□□ -0.82
NECAP1-227ENST00000640648 CUX1P39880 1505 aa9.91□□□□□ -0.82
NECAP1-227ENST00000640648 A0A1B0GUL7 405 aa9.91□□□□□ -0.82
NECAP1-227ENST00000640648 GOLGA6L7A0A1B0GV03 622 aa9.91□□□□□ -0.82
NECAP1-227ENST00000640648 WWC1Q8IX03 1113 aa9.91□□□□□ -0.82
NECAP1-227ENST00000640648 C22orf23Q9BZE7 217 aa9.91□□□□□ -0.82
NECAP1-227ENST00000640648 IFT57Q9NWB7 429 aa9.91□□□□□ -0.82
NECAP1-227ENST00000640648 ANKRD50Q9ULJ7 1429 aa9.91□□□□□ -0.82
NECAP1-227ENST00000640648 MICALCLQ6ZW33 695 aa9.9□□□□□ -0.82
NECAP1-227ENST00000640648 SKAP1Q86WV1 359 aa9.9□□□□□ -0.82
NECAP1-227ENST00000640648 DZIP1LQ8IYY4 767 aaKnown RBP9.9□□□□□ -0.82
NECAP1-227ENST00000640648 NOL10Q9BSC4 688 aaKnown RBP9.9□□□□□ -0.82
NECAP1-227ENST00000640648 STK31Q9BXU1 1019 aa9.9□□□□□ -0.82
NECAP1-227ENST00000640648 MYO6Q9UM54 1294 aa9.9□□□□□ -0.82
NECAP1-227ENST00000640648 LNPKQ9C0E8 428 aa9.9□□□□□ -0.83
NECAP1-227ENST00000640648 POTEB2H3BUK9 544 aa9.89□□□□□ -0.83
NECAP1-227ENST00000640648 TMX4Q9H1E5 349 aaPredicted RBP9.89□□□□□ -0.83
NECAP1-227ENST00000640648 FYCO1Q9BQS8 1478 aa9.89□□□□□ -0.83
NECAP1-227ENST00000640648 DHX29Q7Z478 1369 aaKnown RBP9.89□□□□□ -0.83
NECAP1-227ENST00000640648 BANK1Q8NDB2 785 aa9.89□□□□□ -0.83
NECAP1-227ENST00000640648 CAGE1Q8TC20 777 aa9.89□□□□□ -0.83
NECAP1-227ENST00000640648 MRVI1Q9Y6F6 885 aa9.89□□□□□ -0.83
NECAP1-227ENST00000640648 HFM1A2PYH4 1435 aa9.88□□□□□ -0.83
NECAP1-227ENST00000640648 MCM3P25205 808 aa9.88□□□□□ -0.83
NECAP1-227ENST00000640648 TMCO3Q6UWJ1 677 aa9.88□□□□□ -0.83
NECAP1-227ENST00000640648 KLHL34Q8N239 644 aa9.88□□□□□ -0.83
NECAP1-227ENST00000640648 KIF1CO43896 1103 aaKnown RBP9.88□□□□□ -0.83
NECAP1-227ENST00000640648 TPD52L1Q16890 204 aaPredicted RBP9.88□□□□□ -0.83
NECAP1-227ENST00000640648 ZKSCAN5Q9Y2L8 839 aa9.88□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms