RNA–Protein interactions for RNA: ENST00000640552.1

GFAP-237, Transcript of glial fibrillary acidic protein, humanhuman

TSL 5

Gene GFAP, Length 3,573 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GFAP-237ENST00000640552 INO80Q9ULG1 1556 aaPredicted RBP18.16■□□□□ 0.5
GFAP-237ENST00000640552 HDGFL2Q7Z4V5 671 aaPredicted RBP18.16■□□□□ 0.5
GFAP-237ENST00000640552 TERF2IPQ9NYB0 399 aa18.16■□□□□ 0.5
GFAP-237ENST00000640552 RUNDC1Q96C34 613 aa18.15■□□□□ 0.5
GFAP-237ENST00000640552 RPGRIP1LQ68CZ1 1315 aa18.14■□□□□ 0.5
GFAP-237ENST00000640552 ARAP3Q8WWN8 1544 aa18.14■□□□□ 0.5
GFAP-237ENST00000640552 NEFMP07197 916 aa18.14■□□□□ 0.49
GFAP-237ENST00000640552 EFCAB6Q5THR3 1501 aa18.14■□□□□ 0.49
GFAP-237ENST00000640552 RTL5Q5HYW3 569 aaPredicted RBP18.14■□□□□ 0.49
GFAP-237ENST00000640552 TNNQ9UQP3 1299 aa18.14■□□□□ 0.49
GFAP-237ENST00000640552 HMOX1P09601 288 aa18.13■□□□□ 0.49
GFAP-237ENST00000640552 BLMP54132 1417 aaPredicted RBP18.13■□□□□ 0.49
GFAP-237ENST00000640552 PPRC1Q5VV67 1664 aaKnown RBP18.13■□□□□ 0.49
GFAP-237ENST00000640552 IPO9Q96P70 1041 aaKnown RBP18.13■□□□□ 0.49
GFAP-237ENST00000640552 RNF17Q9BXT8 1623 aaKnown RBP18.12■□□□□ 0.49
GFAP-237ENST00000640552 ELL2O00472 640 aaPredicted RBP18.12■□□□□ 0.49
GFAP-237ENST00000640552 NCKAP5LQ9HCH0 1330 aa18.12■□□□□ 0.49
GFAP-237ENST00000640552 KIF1BO60333 1816 aa18.12■□□□□ 0.49
GFAP-237ENST00000640552 FTSJ3Q8IY81 847 aaKnown RBP18.11■□□□□ 0.49
GFAP-237ENST00000640552 ABCA6Q8N139 1617 aa18.1■□□□□ 0.49
GFAP-237ENST00000640552 MAP3K4Q9Y6R4 1608 aa18.09■□□□□ 0.49
GFAP-237ENST00000640552 CEBPAP49715 358 aaPredicted RBP18.09■□□□□ 0.49
GFAP-237ENST00000640552 MLH3Q9UHC1 1453 aa18.08■□□□□ 0.49
GFAP-237ENST00000640552 TSPOAP1O95153 1857 aa18.08■□□□□ 0.48
GFAP-237ENST00000640552 PIK3C2GO75747 1445 aa18.07■□□□□ 0.48
GFAP-237ENST00000640552 RIPK4P57078 832 aa18.07■□□□□ 0.48
GFAP-237ENST00000640552 SMC4Q9NTJ3 1288 aa18.07■□□□□ 0.48
GFAP-237ENST00000640552 MROH1Q8NDA8 1641 aa18.07■□□□□ 0.48
GFAP-237ENST00000640552 ZRANB1Q9UGI0 708 aa18.06■□□□□ 0.48
GFAP-237ENST00000640552 ZMYM4Q5VZL5 1548 aa18.06■□□□□ 0.48
GFAP-237ENST00000640552 FYB1O15117 783 aa18.06■□□□□ 0.48
GFAP-237ENST00000640552 KDM5AP29375 1690 aaKnown RBP18.06■□□□□ 0.48
GFAP-237ENST00000640552 TRHP20396 242 aaPredicted RBP18.06■□□□□ 0.48
GFAP-237ENST00000640552 BACH2Q9BYV9 841 aa18.06■□□□□ 0.48
GFAP-237ENST00000640552 CENPQQ7L2Z9 268 aaPredicted RBP18.05■□□□□ 0.48
GFAP-237ENST00000640552 THUMPD2Q9BTF0 503 aaKnown RBP18.05■□□□□ 0.48
GFAP-237ENST00000640552 HECW2Q9P2P5 1572 aa18.05■□□□□ 0.48
GFAP-237ENST00000640552 ABCC3O15438 1527 aa18.05■□□□□ 0.48
GFAP-237ENST00000640552 DIAPH1O60610 1272 aaKnown RBP18.05■□□□□ 0.48
GFAP-237ENST00000640552 SLC26A8Q96RN1 970 aa18.05■□□□□ 0.48
GFAP-237ENST00000640552 A0A1W2PP64 1363 aa18.04■□□□□ 0.48
GFAP-237ENST00000640552 MROH2AA6NES4 1674 aa18.04■□□□□ 0.48
GFAP-237ENST00000640552 MYOM2P54296 1465 aa18.04■□□□□ 0.48
GFAP-237ENST00000640552 IQGAP1P46940 1657 aa18.04■□□□□ 0.48
GFAP-237ENST00000640552 EXOSC9Q06265 439 aaKnown RBP18.04■□□□□ 0.48
GFAP-237ENST00000640552 ZNF521Q96K83 1311 aa18.03■□□□□ 0.48
GFAP-237ENST00000640552 SYNMO15061 1565 aa18.03■□□□□ 0.48
GFAP-237ENST00000640552 RRS1Q15050 365 aaKnown RBP18.03■□□□□ 0.48
GFAP-237ENST00000640552 MYH16Q9H6N6 1097 aa18.03■□□□□ 0.48
GFAP-237ENST00000640552 DEPDC5O75140 1603 aa18.03■□□□□ 0.48
GFAP-237ENST00000640552 LAMC1P11047 1609 aa18.03■□□□□ 0.48
GFAP-237ENST00000640552 IGHDP01880 384 aa18.02■□□□□ 0.48
GFAP-237ENST00000640552 ITPRIPQ8IWB1 547 aa18.02■□□□□ 0.48
GFAP-237ENST00000640552 NME9Q86XW9 330 aa18.01■□□□□ 0.47
GFAP-237ENST00000640552 NKTRP30414 1462 aaKnown RBP18.01■□□□□ 0.47
GFAP-237ENST00000640552 C14orf37Q86TY3 774 aa18.01■□□□□ 0.47
GFAP-237ENST00000640552 FRMPD1Q5SYB0 1578 aa18.01■□□□□ 0.47
GFAP-237ENST00000640552 VWDEQ8N2E2 1590 aa18.01■□□□□ 0.47
GFAP-237ENST00000640552 EMILIN1Q9Y6C2 1016 aa18.01■□□□□ 0.47
GFAP-237ENST00000640552 PRKAR2BP31323 418 aa18■□□□□ 0.47
GFAP-237ENST00000640552 RARSP54136 660 aaKnown RBP18■□□□□ 0.47
GFAP-237ENST00000640552 RLBP1P12271 317 aa17.99■□□□□ 0.47
GFAP-237ENST00000640552 NEO1Q92859 1461 aa17.99■□□□□ 0.47
GFAP-237ENST00000640552 ANKRD36BQ8N2N9 1353 aa17.99■□□□□ 0.47
GFAP-237ENST00000640552 NPC1L1Q9UHC9 1359 aa17.99■□□□□ 0.47
GFAP-237ENST00000640552 ZBTB7CA1YPR0 619 aa17.99■□□□□ 0.47
GFAP-237ENST00000640552 POLR3AO14802 1390 aaPredicted RBP17.99■□□□□ 0.47
GFAP-237ENST00000640552 TMPOP42166 694 aaKnown RBP17.98■□□□□ 0.47
GFAP-237ENST00000640552 ADGRB3O60242 1522 aa17.97■□□□□ 0.47
GFAP-237ENST00000640552 PMFBP1Q8TBY8 1022 aa17.96■□□□□ 0.47
GFAP-237ENST00000640552 MS4A1P11836 297 aa17.96■□□□□ 0.47
GFAP-237ENST00000640552 YTHDC2Q9H6S0 1430 aaKnown RBP17.96■□□□□ 0.46
GFAP-237ENST00000640552 NUTM2GQ5VZR2 741 aa17.95■□□□□ 0.46
GFAP-237ENST00000640552 SBNO2Q9Y2G9 1366 aa17.94■□□□□ 0.46
GFAP-237ENST00000640552 RBM33Q96EV2 1170 aaKnown RBP17.94■□□□□ 0.46
GFAP-237ENST00000640552 FAM161AQ3B820 660 aa17.94■□□□□ 0.46
GFAP-237ENST00000640552 NUDT16Q96DE0 195 aaKnown RBP17.94■□□□□ 0.46
GFAP-237ENST00000640552 COG3Q96JB2 828 aa17.94■□□□□ 0.46
GFAP-237ENST00000640552 DCTN1Q14203 1278 aa17.93■□□□□ 0.46
GFAP-237ENST00000640552 ATAD2Q6PL18 1390 aa17.93■□□□□ 0.46
GFAP-237ENST00000640552 ZKSCAN2Q63HK3 967 aa17.93■□□□□ 0.46
GFAP-237ENST00000640552 DEKP35659 375 aaKnown RBP17.92■□□□□ 0.46
GFAP-237ENST00000640552 SPRYD3Q8NCJ5 442 aa17.92■□□□□ 0.46
GFAP-237ENST00000640552 WDR63Q8IWG1 891 aa17.92■□□□□ 0.46
GFAP-237ENST00000640552 TRMT2AQ8IZ69 625 aaKnown RBP17.92■□□□□ 0.46
GFAP-237ENST00000640552 DIP2CQ9Y2E4 1556 aa17.91■□□□□ 0.46
GFAP-237ENST00000640552 DZIP1LQ8IYY4 767 aaKnown RBP17.91■□□□□ 0.46
GFAP-237ENST00000640552 SSH1Q8WYL5 1049 aa17.91■□□□□ 0.46
GFAP-237ENST00000640552 PCDHB15Q9Y5E8 787 aa17.91■□□□□ 0.46
GFAP-237ENST00000640552 HDGFP51858 240 aaKnown RBP17.9■□□□□ 0.46
GFAP-237ENST00000640552 PDE3AQ14432 1141 aa17.9■□□□□ 0.46
GFAP-237ENST00000640552 NOB1Q9ULX3 412 aaKnown RBP17.9■□□□□ 0.46
GFAP-237ENST00000640552 PHACTR3Q96KR7 559 aa17.9■□□□□ 0.46
GFAP-237ENST00000640552 LMTK2Q8IWU2 1503 aa17.9■□□□□ 0.46
GFAP-237ENST00000640552 WASLO00401 505 aaPredicted RBP17.9■□□□□ 0.46
GFAP-237ENST00000640552 CFAP74Q9C0B2 1584 aa17.89■□□□□ 0.46
GFAP-237ENST00000640552 QRICH2Q9H0J4 1663 aa17.89■□□□□ 0.45
GFAP-237ENST00000640552 POLKQ9UBT6 870 aa17.89■□□□□ 0.45
GFAP-237ENST00000640552 MYOM1P52179 1685 aa17.89■□□□□ 0.45
GFAP-237ENST00000640552 FAM83GA6ND36 823 aa17.89■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms