RNA–Protein interactions for RNA: ENST00000640306.1

HNRNPU-228, Transcript of heterogeneous nuclear ribonucleoprotein U, humanhuman

TSL 5

Gene HNRNPU, Length 2,917 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPU-228ENST00000640306 MAP3K4Q9Y6R4 1608 aa21.33■■□□□ 1.01
HNRNPU-228ENST00000640306 CFAP74Q9C0B2 1584 aa21.33■■□□□ 1.01
HNRNPU-228ENST00000640306 NOS1P29475 1434 aa21.33■■□□□ 1.01
HNRNPU-228ENST00000640306 TET3O43151 1660 aa21.32■■□□□ 1
HNRNPU-228ENST00000640306 ABCA6Q8N139 1617 aa21.32■■□□□ 1
HNRNPU-228ENST00000640306 SAFB2Q14151 953 aaKnown RBP eCLIP21.32■■□□□ 1
HNRNPU-228ENST00000640306 TSPOAP1O95153 1857 aa21.32■■□□□ 1
HNRNPU-228ENST00000640306 DIP2BQ9P265 1576 aa21.32■■□□□ 1
HNRNPU-228ENST00000640306 CGNL1Q0VF96 1302 aa21.31■■□□□ 1
HNRNPU-228ENST00000640306 RLBP1P12271 317 aa21.31■■□□□ 1
HNRNPU-228ENST00000640306 MTHFSP49914 203 aa21.31■■□□□ 1
HNRNPU-228ENST00000640306 CFAP65Q6ZU64 1925 aaKnown RBP21.3■■□□□ 1
HNRNPU-228ENST00000640306 PDE3AQ14432 1141 aa21.29■■□□□ 1
HNRNPU-228ENST00000640306 MLH3Q9UHC1 1453 aa21.29■■□□□ 1
HNRNPU-228ENST00000640306 HECW2Q9P2P5 1572 aa21.29■■□□□ 1
HNRNPU-228ENST00000640306 RARSP54136 660 aaKnown RBP21.28■■□□□ 1
HNRNPU-228ENST00000640306 RUNDC1Q96C34 613 aa21.28■■□□□ 1
HNRNPU-228ENST00000640306 YEATS2Q9ULM3 1422 aa21.28■■□□□ 1
HNRNPU-228ENST00000640306 DEPDC5O75140 1603 aa21.27■■□□□ 1
HNRNPU-228ENST00000640306 PCDHB15Q9Y5E8 787 aa21.27■■□□□ 1
HNRNPU-228ENST00000640306 POLR3AO14802 1390 aaPredicted RBP21.27■■□□□ 1
HNRNPU-228ENST00000640306 FRMPD1Q5SYB0 1578 aa21.27■■□□□ 1
HNRNPU-228ENST00000640306 SLKQ9H2G2 1235 aaPredicted RBP21.27■■□□□ 1
HNRNPU-228ENST00000640306 USP19O94966 1318 aa21.27■□□□□ 0.99
HNRNPU-228ENST00000640306 GLI2P10070 1586 aa21.26■□□□□ 0.99
HNRNPU-228ENST00000640306 MROH1Q8NDA8 1641 aa21.26■□□□□ 0.99
HNRNPU-228ENST00000640306 SLC24A1O60721 1099 aa21.25■□□□□ 0.99
HNRNPU-228ENST00000640306 ANO8Q9HCE9 1232 aaPredicted RBP21.25■□□□□ 0.99
HNRNPU-228ENST00000640306 U2AF1L5P0DN76 240 aaPredicted RBP21.25■□□□□ 0.99
HNRNPU-228ENST00000640306 U2AF1Q01081 240 aaKnown RBP eCLIP21.25■□□□□ 0.992e-8■■■□□ 17.8
HNRNPU-228ENST00000640306 MYOM2P54296 1465 aa21.23■□□□□ 0.99
HNRNPU-228ENST00000640306 MROH2AA6NES4 1674 aa21.23■□□□□ 0.99
HNRNPU-228ENST00000640306 VWDEQ8N2E2 1590 aa21.23■□□□□ 0.99
HNRNPU-228ENST00000640306 CABP2Q9NPB3 220 aa21.22■□□□□ 0.99
HNRNPU-228ENST00000640306 TSR2Q969E8 191 aaKnown RBP21.21■□□□□ 0.99
HNRNPU-228ENST00000640306 RICTORQ6R327 1708 aa21.2■□□□□ 0.98
HNRNPU-228ENST00000640306 KIAA1210Q9ULL0 1709 aa21.2■□□□□ 0.98
HNRNPU-228ENST00000640306 KIF1BO60333 1816 aa21.2■□□□□ 0.98
HNRNPU-228ENST00000640306 NGEFQ8N5V2 710 aa21.2■□□□□ 0.98
HNRNPU-228ENST00000640306 C14orf93Q9H972 538 aaKnown RBP21.2■□□□□ 0.98
HNRNPU-228ENST00000640306 PDZRN3Q9UPQ7 1066 aa21.2■□□□□ 0.98
HNRNPU-228ENST00000640306 MAPK8IP3Q9UPT6 1336 aa21.19■□□□□ 0.98
HNRNPU-228ENST00000640306 STK26Q9P289 416 aa21.19■□□□□ 0.98
HNRNPU-228ENST00000640306 SPRYD3Q8NCJ5 442 aa21.19■□□□□ 0.98
HNRNPU-228ENST00000640306 CFAP53Q96M91 514 aa21.19■□□□□ 0.98
HNRNPU-228ENST00000640306 U2SURPO15042 1029 aaKnown RBP21.18■□□□□ 0.98
HNRNPU-228ENST00000640306 DIP2CQ9Y2E4 1556 aa21.18■□□□□ 0.98
HNRNPU-228ENST00000640306 EFCAB6Q5THR3 1501 aa21.18■□□□□ 0.98
HNRNPU-228ENST00000640306 PPRC1Q5VV67 1664 aaKnown RBP21.18■□□□□ 0.98
HNRNPU-228ENST00000640306 PMFBP1Q8TBY8 1022 aa21.16■□□□□ 0.98
HNRNPU-228ENST00000640306 ZBTB4Q9P1Z0 1013 aaPredicted RBP21.15■□□□□ 0.98
HNRNPU-228ENST00000640306 SBNO2Q9Y2G9 1366 aa21.15■□□□□ 0.98
HNRNPU-228ENST00000640306 NPATQ14207 1427 aa21.15■□□□□ 0.98
HNRNPU-228ENST00000640306 FTSJ3Q8IY81 847 aaKnown RBP21.15■□□□□ 0.98
HNRNPU-228ENST00000640306 GGNBP2Q9H3C7 697 aa21.15■□□□□ 0.98
HNRNPU-228ENST00000640306 WDR63Q8IWG1 891 aa21.14■□□□□ 0.97
HNRNPU-228ENST00000640306 SHPRHQ149N8 1683 aa21.13■□□□□ 0.97
HNRNPU-228ENST00000640306 ARXQ96QS3 562 aa21.13■□□□□ 0.97
HNRNPU-228ENST00000640306 PHF23Q9BUL5 403 aaPredicted RBP21.12■□□□□ 0.97
HNRNPU-228ENST00000640306 POGKQ9P215 609 aa21.12■□□□□ 0.97
HNRNPU-228ENST00000640306 NINLQ9Y2I6 1382 aa21.12■□□□□ 0.97
HNRNPU-228ENST00000640306 NRXN1Q9ULB1 1477 aa21.12■□□□□ 0.97
HNRNPU-228ENST00000640306 BECN1Q14457 450 aa21.11■□□□□ 0.97
HNRNPU-228ENST00000640306 SRPK2P78362 688 aaKnown RBP21.11■□□□□ 0.97
HNRNPU-228ENST00000640306 MYH16Q9H6N6 1097 aa21.11■□□□□ 0.97
HNRNPU-228ENST00000640306 EXOSC9Q06265 439 aaKnown RBP21.11■□□□□ 0.97
HNRNPU-228ENST00000640306 UPF2Q9HAU5 1272 aaKnown RBP21.11■□□□□ 0.97
HNRNPU-228ENST00000640306 SMC4Q9NTJ3 1288 aa21.11■□□□□ 0.97
HNRNPU-228ENST00000640306 EVC2Q86UK5 1308 aa21.1■□□□□ 0.97
HNRNPU-228ENST00000640306 RWDD1Q9H446 243 aaPredicted RBP21.1■□□□□ 0.97
HNRNPU-228ENST00000640306 KIF13AQ9H1H9 1805 aa21.1■□□□□ 0.97
HNRNPU-228ENST00000640306 MLECQ14165 292 aa21.1■□□□□ 0.97
HNRNPU-228ENST00000640306 IQSEC2Q5JU85 1478 aa21.1■□□□□ 0.97
HNRNPU-228ENST00000640306 IFT172Q9UG01 1749 aa21.09■□□□□ 0.97
HNRNPU-228ENST00000640306 ADGRB3O60242 1522 aa21.09■□□□□ 0.97
HNRNPU-228ENST00000640306 QRICH2Q9H0J4 1663 aa21.09■□□□□ 0.97
HNRNPU-228ENST00000640306 MVPQ14764 893 aaKnown RBP21.08■□□□□ 0.97
HNRNPU-228ENST00000640306 ZKSCAN2Q63HK3 967 aa21.08■□□□□ 0.97
HNRNPU-228ENST00000640306 DZIP1LQ8IYY4 767 aaKnown RBP21.08■□□□□ 0.97
HNRNPU-228ENST00000640306 ITPRIPQ8IWB1 547 aa21.08■□□□□ 0.96
HNRNPU-228ENST00000640306 ABCC3O15438 1527 aa21.07■□□□□ 0.96
HNRNPU-228ENST00000640306 ADGRB1O14514 1584 aa21.06■□□□□ 0.96
HNRNPU-228ENST00000640306 MFAP1P55081 439 aaKnown RBP21.06■□□□□ 0.96
HNRNPU-228ENST00000640306 TBC1D2Q9BYX2 928 aa21.06■□□□□ 0.96
HNRNPU-228ENST00000640306 MYO3AQ8NEV4 1616 aa21.06■□□□□ 0.96
HNRNPU-228ENST00000640306 MINK1Q8N4C8 1332 aaPredicted RBP21.06■□□□□ 0.96
HNRNPU-228ENST00000640306 NEURL4Q96JN8 1562 aa21.05■□□□□ 0.96
HNRNPU-228ENST00000640306 NLRP1Q9C000 1473 aa21.05■□□□□ 0.96
HNRNPU-228ENST00000640306 LMTK2Q8IWU2 1503 aa21.05■□□□□ 0.96
HNRNPU-228ENST00000640306 TBC1D32Q96NH3 1257 aa21.05■□□□□ 0.96
HNRNPU-228ENST00000640306 TRIM27P14373 513 aa21.05■□□□□ 0.96
HNRNPU-228ENST00000640306 CCDC27Q2M243 656 aa21.05■□□□□ 0.96
HNRNPU-228ENST00000640306 SSH1Q8WYL5 1049 aa21.05■□□□□ 0.96
HNRNPU-228ENST00000640306 FBLN1P23142 703 aa21.04■□□□□ 0.96
HNRNPU-228ENST00000640306 ANKRD36BQ8N2N9 1353 aa21.03■□□□□ 0.96
HNRNPU-228ENST00000640306 TMPOP42166 694 aaKnown RBP21.03■□□□□ 0.96
HNRNPU-228ENST00000640306 VGFO15240 615 aaPredicted RBP21.02■□□□□ 0.96
HNRNPU-228ENST00000640306 SETBP1Q9Y6X0 1596 aa21.02■□□□□ 0.96
HNRNPU-228ENST00000640306 NOB1Q9ULX3 412 aaKnown RBP21.01■□□□□ 0.95
HNRNPU-228ENST00000640306 A0A1W2PP64 1363 aa21.01■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 71 ms