RNA–Protein interactions for RNA: ENST00000640011.1

PRKCH-228, Transcript of protein kinase C eta, humanhuman

TSL 5 BASIC

Gene PRKCH, Length 285 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-228ENST00000640011 PITPNM1O00562 1244 aa9.65□□□□□ -0.86
PRKCH-228ENST00000640011 CHGAP10645 457 aaKnown RBP9.65□□□□□ -0.86
PRKCH-228ENST00000640011 NUTM2AQ8IVF1 878 aaPredicted RBP9.65□□□□□ -0.86
PRKCH-228ENST00000640011 AMOTL2Q9Y2J4 779 aa9.65□□□□□ -0.86
PRKCH-228ENST00000640011 ADAMTS13Q76LX8 1427 aa9.65□□□□□ -0.87
PRKCH-228ENST00000640011 CREBZFQ9NS37 354 aa9.64□□□□□ -0.87
PRKCH-228ENST00000640011 TRPM2O94759 1503 aa9.64□□□□□ -0.87
PRKCH-228ENST00000640011 PRR29P0C7W0 189 aa9.63□□□□□ -0.87
PRKCH-228ENST00000640011 C8orf37Q96NL8 207 aa9.63□□□□□ -0.87
PRKCH-228ENST00000640011 QTRT2Q9H974 415 aaKnown RBP9.63□□□□□ -0.87
PRKCH-228ENST00000640011 TMEM131LA2VDJ0 1609 aa9.63□□□□□ -0.87
PRKCH-228ENST00000640011 SIPA1L2Q9P2F8 1722 aaPredicted RBP9.62□□□□□ -0.87
PRKCH-228ENST00000640011 PLEKHG5O94827 1062 aa9.62□□□□□ -0.87
PRKCH-228ENST00000640011 NUTM2DQ5VT03 806 aaPredicted RBP9.62□□□□□ -0.87
PRKCH-228ENST00000640011 ATAD2Q6PL18 1390 aa9.62□□□□□ -0.87
PRKCH-228ENST00000640011 ASXL1Q8IXJ9 1541 aa9.61□□□□□ -0.87
PRKCH-228ENST00000640011 CCDC125Q86Z20 511 aa9.61□□□□□ -0.87
PRKCH-228ENST00000640011 RGS12O14924 1447 aa9.6□□□□□ -0.87
PRKCH-228ENST00000640011 SLC24A1O60721 1099 aa9.6□□□□□ -0.87
PRKCH-228ENST00000640011 MNX1P50219 401 aaPredicted RBP9.6□□□□□ -0.87
PRKCH-228ENST00000640011 ZBTB47Q9UFB7 747 aaPredicted RBP9.6□□□□□ -0.87
PRKCH-228ENST00000640011 ZRANB1Q9UGI0 708 aa9.6□□□□□ -0.87
PRKCH-228ENST00000640011 GCC2Q8IWJ2 1684 aa9.6□□□□□ -0.87
PRKCH-228ENST00000640011 MST1RQ04912 1400 aa9.59□□□□□ -0.87
PRKCH-228ENST00000640011 ECM2O94769 699 aaPredicted RBP9.59□□□□□ -0.87
PRKCH-228ENST00000640011 FAM50AQ14320 339 aaKnown RBP9.59□□□□□ -0.87
PRKCH-228ENST00000640011 TRPC5Q9UL62 973 aaPredicted RBP9.59□□□□□ -0.87
PRKCH-228ENST00000640011 PNPLA6Q8IY17 1366 aa9.59□□□□□ -0.87
PRKCH-228ENST00000640011 PTPRUQ92729 1446 aa9.57□□□□□ -0.88
PRKCH-228ENST00000640011 NUBP1P53384 320 aa9.57□□□□□ -0.88
PRKCH-228ENST00000640011 ROCK1Q13464 1354 aa9.57□□□□□ -0.88
PRKCH-228ENST00000640011 ADGRL3Q9HAR2 1447 aa9.56□□□□□ -0.88
PRKCH-228ENST00000640011 NHSL1Q5SYE7 1610 aa9.56□□□□□ -0.88
PRKCH-228ENST00000640011 UNC13BO14795 1591 aa9.56□□□□□ -0.88
PRKCH-228ENST00000640011 SETBP1Q9Y6X0 1596 aa9.56□□□□□ -0.88
PRKCH-228ENST00000640011 LOC105371045A0A1W2PR82 267 aa9.56□□□□□ -0.88
PRKCH-228ENST00000640011 USP21Q9UK80 565 aa9.56□□□□□ -0.88
PRKCH-228ENST00000640011 PTCH1Q13635 1447 aa9.56□□□□□ -0.88
PRKCH-228ENST00000640011 ADAMTS2O95450 1211 aa9.55□□□□□ -0.88
PRKCH-228ENST00000640011 ZNF326Q5BKZ1 582 aaKnown RBP9.55□□□□□ -0.88
PRKCH-228ENST00000640011 FNBP4Q8N3X1 1017 aaPredicted RBP9.55□□□□□ -0.88
PRKCH-228ENST00000640011 CIZ1Q9ULV3 898 aaPredicted RBP9.55□□□□□ -0.88
PRKCH-228ENST00000640011 SOS2Q07890 1332 aaPredicted RBP9.55□□□□□ -0.88
PRKCH-228ENST00000640011 MYO5BQ9ULV0 1848 aa9.54□□□□□ -0.88
PRKCH-228ENST00000640011 XRN1Q8IZH2 1706 aaKnown RBP9.54□□□□□ -0.88
PRKCH-228ENST00000640011 NUP155O75694 1391 aa9.54□□□□□ -0.88
PRKCH-228ENST00000640011 RGL2O15211 777 aa9.54□□□□□ -0.88
PRKCH-228ENST00000640011 C1orf167Q5SNV9 1468 aa9.53□□□□□ -0.88
PRKCH-228ENST00000640011 METP08581 1390 aa9.53□□□□□ -0.88
PRKCH-228ENST00000640011 IQGAP3Q86VI3 1631 aa9.53□□□□□ -0.88
PRKCH-228ENST00000640011 E9PCH4 1651 aa9.52□□□□□ -0.89
PRKCH-228ENST00000640011 ATRNO75882 1429 aa9.51□□□□□ -0.89
PRKCH-228ENST00000640011 VGFO15240 615 aaPredicted RBP9.51□□□□□ -0.89
PRKCH-228ENST00000640011 DDX17Q92841 729 aaKnown RBP9.51□□□□□ -0.89
PRKCH-228ENST00000640011 NPHP3Q7Z494 1330 aa9.51□□□□□ -0.89
PRKCH-228ENST00000640011 LRPPRCP42704 1394 aaKnown RBP9.5□□□□□ -0.89
PRKCH-228ENST00000640011 LAMC1P11047 1609 aa9.5□□□□□ -0.89
PRKCH-228ENST00000640011 EP400Q96L91 3159 aa9.5□□□□□ -0.89
PRKCH-228ENST00000640011 NRXN3Q9Y4C0 1643 aa9.49□□□□□ -0.89
PRKCH-228ENST00000640011 HFM1A2PYH4 1435 aa9.49□□□□□ -0.89
PRKCH-228ENST00000640011 SF3B2Q13435 895 aaKnown RBP9.49□□□□□ -0.89
PRKCH-228ENST00000640011 CHADLQ6NUI6 762 aa9.49□□□□□ -0.89
PRKCH-228ENST00000640011 GJD4Q96KN9 370 aaPredicted RBP9.49□□□□□ -0.89
PRKCH-228ENST00000640011 PRAG1Q86YV5 1406 aa9.48□□□□□ -0.89
PRKCH-228ENST00000640011 ORAI2Q96SN7 254 aa9.48□□□□□ -0.89
PRKCH-228ENST00000640011 BLMP54132 1417 aaPredicted RBP9.48□□□□□ -0.89
PRKCH-228ENST00000640011 RASEFQ8IZ41 740 aa9.47□□□□□ -0.89
PRKCH-228ENST00000640011 RPGRIP1LQ68CZ1 1315 aa9.47□□□□□ -0.89
PRKCH-228ENST00000640011 MYOM2P54296 1465 aa9.47□□□□□ -0.89
PRKCH-228ENST00000640011 BCL9LQ86UU0 1499 aa9.47□□□□□ -0.89
PRKCH-228ENST00000640011 COL22A1Q8NFW1 1626 aaPredicted RBP9.46□□□□□ -0.89
PRKCH-228ENST00000640011 NEXMIFQ5QGS0 1516 aa9.46□□□□□ -0.9
PRKCH-228ENST00000640011 NALCNQ8IZF0 1738 aa9.45□□□□□ -0.9
PRKCH-228ENST00000640011 GSE1Q14687 1217 aa9.45□□□□□ -0.9
PRKCH-228ENST00000640011 ESCO1Q5FWF5 840 aa9.45□□□□□ -0.9
PRKCH-228ENST00000640011 DCAF8Q5TAQ9 597 aa9.45□□□□□ -0.9
PRKCH-228ENST00000640011 UNC5CLQ8IV45 518 aa9.45□□□□□ -0.9
PRKCH-228ENST00000640011 ROBO2Q9HCK4 1378 aa9.45□□□□□ -0.9
PRKCH-228ENST00000640011 SPHKAPQ2M3C7 1700 aa9.44□□□□□ -0.9
PRKCH-228ENST00000640011 PLCB2Q00722 1185 aa9.43□□□□□ -0.9
PRKCH-228ENST00000640011 RNF25Q96BH1 459 aaPredicted RBP9.43□□□□□ -0.9
PRKCH-228ENST00000640011 FOXO3O43524 673 aa9.42□□□□□ -0.9
PRKCH-228ENST00000640011 CDC42BPGQ6DT37 1551 aa9.41□□□□□ -0.9
PRKCH-228ENST00000640011 SLIT2O94813 1529 aa9.41□□□□□ -0.9
PRKCH-228ENST00000640011 PXDNQ92626 1479 aa9.41□□□□□ -0.9
PRKCH-228ENST00000640011 ITGAEP38570 1179 aa9.41□□□□□ -0.9
PRKCH-228ENST00000640011 FXR2P51116 673 aaKnown RBP eCLIP9.41□□□□□ -0.9
PRKCH-228ENST00000640011 RALGAPBQ86X10 1494 aa9.4□□□□□ -0.9
PRKCH-228ENST00000640011 CCDC144AA2RUR9 1427 aa9.4□□□□□ -0.9
PRKCH-228ENST00000640011 ONECUT3O60422 494 aaPredicted RBP9.4□□□□□ -0.9
PRKCH-228ENST00000640011 BAG6P46379 1132 aa9.4□□□□□ -0.9
PRKCH-228ENST00000640011 HAP1P54257 671 aaPredicted RBP9.4□□□□□ -0.9
PRKCH-228ENST00000640011 TNKS1BP1Q9C0C2 1729 aaKnown RBP9.39□□□□□ -0.91
PRKCH-228ENST00000640011 CLTCL1P53675 1640 aa9.39□□□□□ -0.91
PRKCH-228ENST00000640011 SPATA31A3Q5VYP0 1347 aa9.39□□□□□ -0.91
PRKCH-228ENST00000640011 PRKAR2AP13861 404 aaKnown RBP9.39□□□□□ -0.91
PRKCH-228ENST00000640011 PSME1Q06323 249 aa9.39□□□□□ -0.91
PRKCH-228ENST00000640011 VPS72Q15906 364 aa9.39□□□□□ -0.91
PRKCH-228ENST00000640011 KRT27Q7Z3Y8 459 aa9.39□□□□□ -0.91
PRKCH-228ENST00000640011 SEPT12Q8IYM1 358 aa9.39□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms