RNA–Protein interactions for RNA: ENST00000639715.1

SCARB2-218, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5

Gene SCARB2, Length 4,355 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-218ENST00000639715 KCNJ4P48050 445 aa7.05□□□□□ -1.28
SCARB2-218ENST00000639715 CASC1Q6TDU7 716 aa7.05□□□□□ -1.28
SCARB2-218ENST00000639715 GPATCH8Q9UKJ3 1502 aaKnown RBP7.05□□□□□ -1.28
SCARB2-218ENST00000639715 KIF14Q15058 1648 aa7.04□□□□□ -1.28
SCARB2-218ENST00000639715 KIF20AO95235 890 aa7.04□□□□□ -1.28
SCARB2-218ENST00000639715 SAMD9Q5K651 1589 aa7.04□□□□□ -1.28
SCARB2-218ENST00000639715 PTPRMP28827 1452 aa7.04□□□□□ -1.28
SCARB2-218ENST00000639715 APAF1O14727 1248 aa7.04□□□□□ -1.28
SCARB2-218ENST00000639715 CCDC66A2RUB6 948 aa7.04□□□□□ -1.28
SCARB2-218ENST00000639715 CHAF1AQ13111 956 aaPredicted RBP7.04□□□□□ -1.28
SCARB2-218ENST00000639715 ZSCAN30Q86W11 494 aa7.04□□□□□ -1.28
SCARB2-218ENST00000639715 EVC2Q86UK5 1308 aa7.04□□□□□ -1.28
SCARB2-218ENST00000639715 RAPGEF6Q8TEU7 1601 aa7.04□□□□□ -1.28
SCARB2-218ENST00000639715 ERBINQ96RT1 1412 aa7.04□□□□□ -1.28
SCARB2-218ENST00000639715 GTPBP4Q9BZE4 634 aaKnown RBP7.04□□□□□ -1.28
SCARB2-218ENST00000639715 ADAMTS8Q9UP79 889 aa7.04□□□□□ -1.28
SCARB2-218ENST00000639715 PPP2R1AP30153 589 aa7.03□□□□□ -1.28
SCARB2-218ENST00000639715 TRAK1Q9UPV9 953 aa7.03□□□□□ -1.28
SCARB2-218ENST00000639715 SCAPERQ9BY12 1400 aa7.03□□□□□ -1.28
SCARB2-218ENST00000639715 STRCQ7RTU9 1775 aa7.03□□□□□ -1.28
SCARB2-218ENST00000639715 ABCC2Q92887 1545 aa7.03□□□□□ -1.28
SCARB2-218ENST00000639715 DDX11L8A8MPP1 907 aa7.03□□□□□ -1.28
SCARB2-218ENST00000639715 HSCBQ8IWL3 235 aa7.03□□□□□ -1.28
SCARB2-218ENST00000639715 NUP153P49790 1475 aaKnown RBP7.03□□□□□ -1.28
SCARB2-218ENST00000639715 ITSN2Q9NZM3 1697 aa7.03□□□□□ -1.28
SCARB2-218ENST00000639715 WWC1Q8IX03 1113 aa7.03□□□□□ -1.28
SCARB2-218ENST00000639715 SECISBP2LQ93073 1101 aaKnown RBP7.02□□□□□ -1.29
SCARB2-218ENST00000639715 GBP4Q96PP9 640 aa7.02□□□□□ -1.29
SCARB2-218ENST00000639715 STK26Q9P289 416 aa7.02□□□□□ -1.29
SCARB2-218ENST00000639715 KDM5BQ9UGL1 1544 aa7.02□□□□□ -1.29
SCARB2-218ENST00000639715 KIAA2012Q0VF49 1180 aa7.02□□□□□ -1.29
SCARB2-218ENST00000639715 SAFB2Q14151 953 aaKnown RBP eCLIP7.02□□□□□ -1.29
SCARB2-218ENST00000639715 C14orf37Q86TY3 774 aa7.02□□□□□ -1.29
SCARB2-218ENST00000639715 CERS3Q8IU89 383 aa7.02□□□□□ -1.29
SCARB2-218ENST00000639715 MED1Q15648 1581 aaPredicted RBP7.02□□□□□ -1.29
SCARB2-218ENST00000639715 IGSF3O75054 1194 aa7.01□□□□□ -1.29
SCARB2-218ENST00000639715 RUNDC1Q96C34 613 aa7.01□□□□□ -1.29
SCARB2-218ENST00000639715 CDCA7LQ96GN5 454 aa7.01□□□□□ -1.29
SCARB2-218ENST00000639715 SMC4Q9NTJ3 1288 aa7.01□□□□□ -1.29
SCARB2-218ENST00000639715 NASPP49321 788 aaPredicted RBP7.01□□□□□ -1.29
SCARB2-218ENST00000639715 DMTNQ08495 405 aa7.01□□□□□ -1.29
SCARB2-218ENST00000639715 ZNF830Q96NB3 372 aaPredicted RBP7.01□□□□□ -1.29
SCARB2-218ENST00000639715 SENP3Q9H4L4 574 aaPredicted RBP7.01□□□□□ -1.29
SCARB2-218ENST00000639715 RALGAPBQ86X10 1494 aa7.01□□□□□ -1.29
SCARB2-218ENST00000639715 DYNC1I1O14576 645 aa7.01□□□□□ -1.29
SCARB2-218ENST00000639715 CCDC173Q0VFZ6 552 aa7.01□□□□□ -1.29
SCARB2-218ENST00000639715 SKAP1Q86WV1 359 aa7.01□□□□□ -1.29
SCARB2-218ENST00000639715 DNAJC2Q99543 621 aaKnown RBP7.01□□□□□ -1.29
SCARB2-218ENST00000639715 CCDC94Q9BW85 323 aaPredicted RBP7.01□□□□□ -1.29
SCARB2-218ENST00000639715 TULP1O00294 542 aaPredicted RBP7.01□□□□□ -1.29
SCARB2-218ENST00000639715 OFD1O75665 1012 aa7.01□□□□□ -1.29
SCARB2-218ENST00000639715 HSP90AB1P08238 724 aaKnown RBP7.01□□□□□ -1.29
SCARB2-218ENST00000639715 MCM4P33991 863 aa7.01□□□□□ -1.29
SCARB2-218ENST00000639715 UTP14CQ5TAP6 766 aaKnown RBP7.01□□□□□ -1.29
SCARB2-218ENST00000639715 HOMEZQ8IX15 550 aa7.01□□□□□ -1.29
SCARB2-218ENST00000639715 AFAP1Q8N556 730 aa7.01□□□□□ -1.29
SCARB2-218ENST00000639715 TSPOAP1O95153 1857 aa7□□□□□ -1.29
SCARB2-218ENST00000639715 ZKSCAN2Q63HK3 967 aa7□□□□□ -1.29
SCARB2-218ENST00000639715 ITPRIPQ8IWB1 547 aa7□□□□□ -1.29
SCARB2-218ENST00000639715 ISY1Q9ULR0 285 aaKnown RBP7□□□□□ -1.29
SCARB2-218ENST00000639715 KIAA0556O60303 1618 aa7□□□□□ -1.29
SCARB2-218ENST00000639715 ZMYM4Q5VZL5 1548 aa7□□□□□ -1.29
SCARB2-218ENST00000639715 XPCQ01831 940 aaPredicted RBP7□□□□□ -1.29
SCARB2-218ENST00000639715 DNMT1P26358 1616 aaKnown RBP7□□□□□ -1.29
SCARB2-218ENST00000639715 LMOD3Q0VAK6 560 aa6.99□□□□□ -1.29
SCARB2-218ENST00000639715 PDE3AQ14432 1141 aa6.99□□□□□ -1.29
SCARB2-218ENST00000639715 TEX2Q8IWB9 1127 aa6.99□□□□□ -1.29
SCARB2-218ENST00000639715 CHMP5Q9NZZ3 219 aa6.99□□□□□ -1.29
SCARB2-218ENST00000639715 CLGNO14967 610 aa6.99□□□□□ -1.29
SCARB2-218ENST00000639715 CLUAP1Q96AJ1 413 aa6.99□□□□□ -1.29
SCARB2-218ENST00000639715 TRERF1Q96PN7 1200 aa6.99□□□□□ -1.29
SCARB2-218ENST00000639715 ARHGEF12Q9NZN5 1544 aa6.99□□□□□ -1.29
SCARB2-218ENST00000639715 DISP3Q9P2K9 1392 aa6.99□□□□□ -1.29
SCARB2-218ENST00000639715 HDAC5Q9UQL6 1122 aa6.99□□□□□ -1.29
SCARB2-218ENST00000639715 COG6Q9Y2V7 657 aa6.99□□□□□ -1.29
SCARB2-218ENST00000639715 ARHGEF40Q8TER5 1519 aa6.98□□□□□ -1.29
SCARB2-218ENST00000639715 SHANK2Q9UPX8 1470 aa6.98□□□□□ -1.29
SCARB2-218ENST00000639715 NINLQ9Y2I6 1382 aa6.98□□□□□ -1.29
SCARB2-218ENST00000639715 SPDYE4A6NLX3 237 aa6.98□□□□□ -1.29
SCARB2-218ENST00000639715 SKOR2Q2VWA4 1001 aaPredicted RBP6.98□□□□□ -1.29
SCARB2-218ENST00000639715 PLCB2Q00722 1185 aa6.98□□□□□ -1.29
SCARB2-218ENST00000639715 CFAP70Q5T0N1 1121 aa6.98□□□□□ -1.29
SCARB2-218ENST00000639715 GCC2Q8IWJ2 1684 aa6.98□□□□□ -1.29
SCARB2-218ENST00000639715 RRP7AQ9Y3A4 280 aaKnown RBP6.98□□□□□ -1.29
SCARB2-218ENST00000639715 REREQ9P2R6 1566 aa6.98□□□□□ -1.29
SCARB2-218ENST00000639715 ATP10BO94823 1461 aa6.98□□□□□ -1.29
SCARB2-218ENST00000639715 CERKQ8TCT0 537 aa6.97□□□□□ -1.29
SCARB2-218ENST00000639715 ADGRL2O95490 1459 aa6.97□□□□□ -1.29
SCARB2-218ENST00000639715 SASS6Q6UVJ0 657 aa6.97□□□□□ -1.29
SCARB2-218ENST00000639715 DDX19BQ9UMR2 479 aa6.97□□□□□ -1.29
SCARB2-218ENST00000639715 DDX49Q9Y6V7 483 aaKnown RBP6.97□□□□□ -1.29
SCARB2-218ENST00000639715 FAM193AP78312 1265 aa6.97□□□□□ -1.29
SCARB2-218ENST00000639715 CNPY4Q8N129 248 aa6.97□□□□□ -1.29
SCARB2-218ENST00000639715 UHRF1BP1Q6BDS2 1440 aa6.96□□□□□ -1.29
SCARB2-218ENST00000639715 RPGRIP1LQ68CZ1 1315 aa6.96□□□□□ -1.29
SCARB2-218ENST00000639715 PZPP20742 1482 aa6.96□□□□□ -1.29
SCARB2-218ENST00000639715 TMEM51Q9NW97 253 aa6.96□□□□□ -1.29
SCARB2-218ENST00000639715 BCCIPQ9P287 314 aaKnown RBP eCLIP6.96□□□□□ -1.29
SCARB2-218ENST00000639715 TRIM6-TRIM34B2RNG4 842 aa6.96□□□□□ -1.3
SCARB2-218ENST00000639715 HMGN5P82970 282 aaKnown RBP6.96□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms