RNA–Protein interactions for RNA: ENST00000639603.1

STRADA-238, Transcript of STE20-related kinase adaptor alpha, human

TSL 5

Gene STRADA, Length 535 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
STRADA-238	ENST00000639603	PTCH1	Q13635	1447 aa		11.68	□□□□□ -0.54
STRADA-238	ENST00000639603	EP400	Q96L91	3159 aa		11.67	□□□□□ -0.54
STRADA-238	ENST00000639603	ROCK1	Q13464	1354 aa		11.67	□□□□□ -0.54
STRADA-238	ENST00000639603	NEXMIF	Q5QGS0	1516 aa		11.66	□□□□□ -0.54
STRADA-238	ENST00000639603	FAM50A	Q14320	339 aa	Known RBP	11.66	□□□□□ -0.54
STRADA-238	ENST00000639603	CLTCL1	P53675	1640 aa		11.65	□□□□□ -0.54
STRADA-238	ENST00000639603	SRCAP	Q6ZRS2	3230 aa		11.65	□□□□□ -0.54
STRADA-238	ENST00000639603	ZRANB1	Q9UGI0	708 aa		11.65	□□□□□ -0.54
STRADA-238	ENST00000639603	C1orf167	Q5SNV9	1468 aa		11.64	□□□□□ -0.55
STRADA-238	ENST00000639603	TRPC5	Q9UL62	973 aa	Predicted RBP	11.64	□□□□□ -0.55
STRADA-238	ENST00000639603	LRP5	O75197	1615 aa		11.64	□□□□□ -0.55
STRADA-238	ENST00000639603	BRWD3	Q6RI45	1802 aa		11.63	□□□□□ -0.55
STRADA-238	ENST00000639603	ATRN	O75882	1429 aa		11.63	□□□□□ -0.55
STRADA-238	ENST00000639603	LOC105371045	A0A1W2PR82	267 aa		11.63	□□□□□ -0.55
STRADA-238	ENST00000639603	CCDC125	Q86Z20	511 aa		11.63	□□□□□ -0.55
STRADA-238	ENST00000639603	MET	P08581	1390 aa		11.63	□□□□□ -0.55
STRADA-238	ENST00000639603	PRAG1	Q86YV5	1406 aa		11.62	□□□□□ -0.55
STRADA-238	ENST00000639603	USP21	Q9UK80	565 aa		11.62	□□□□□ -0.55
STRADA-238	ENST00000639603	NUP155	O75694	1391 aa		11.62	□□□□□ -0.55
STRADA-238	ENST00000639603	CDC42BPG	Q6DT37	1551 aa		11.62	□□□□□ -0.55
STRADA-238	ENST00000639603	PPL	O60437	1756 aa		11.62	□□□□□ -0.55
STRADA-238	ENST00000639603	SOS2	Q07890	1332 aa	Predicted RBP	11.61	□□□□□ -0.55
STRADA-238	ENST00000639603	ADAMTS2	O95450	1211 aa		11.61	□□□□□ -0.55
STRADA-238	ENST00000639603	MYOM2	P54296	1465 aa		11.6	□□□□□ -0.55
STRADA-238	ENST00000639603	ZNF326	Q5BKZ1	582 aa	Known RBP	11.6	□□□□□ -0.55
STRADA-238	ENST00000639603	FNBP4	Q8N3X1	1017 aa	Predicted RBP	11.6	□□□□□ -0.55
STRADA-238	ENST00000639603	DDX17	Q92841	729 aa	Known RBP	11.6	□□□□□ -0.55
STRADA-238	ENST00000639603	KIF1A	Q12756	1690 aa		11.59	□□□□□ -0.55
STRADA-238	ENST00000639603	NWD2	Q9ULI1	1742 aa		11.58	□□□□□ -0.56
STRADA-238	ENST00000639603	HFM1	A2PYH4	1435 aa		11.58	□□□□□ -0.56
STRADA-238	ENST00000639603	KNDC1	Q76NI1	1749 aa		11.57	□□□□□ -0.56
STRADA-238	ENST00000639603	PXDN	Q92626	1479 aa		11.57	□□□□□ -0.56
STRADA-238	ENST00000639603	USP32	Q8NFA0	1604 aa		11.57	□□□□□ -0.56
STRADA-238	ENST00000639603	PLCH1	Q4KWH8	1693 aa		11.56	□□□□□ -0.56
STRADA-238	ENST00000639603	GLI3	P10071	1580 aa		11.56	□□□□□ -0.56
STRADA-238	ENST00000639603	BLM	P54132	1417 aa	Predicted RBP	11.56	□□□□□ -0.56
STRADA-238	ENST00000639603	BCL9L	Q86UU0	1499 aa		11.56	□□□□□ -0.56
STRADA-238	ENST00000639603	NPHP3	Q7Z494	1330 aa		11.56	□□□□□ -0.56
STRADA-238	ENST00000639603	ABCA3	Q99758	1704 aa		11.55	□□□□□ -0.56
STRADA-238	ENST00000639603	FMN2	Q9NZ56	1722 aa		11.55	□□□□□ -0.56
STRADA-238	ENST00000639603	IFT172	Q9UG01	1749 aa		11.55	□□□□□ -0.56
STRADA-238	ENST00000639603	ORAI2	Q96SN7	254 aa		11.54	□□□□□ -0.56
STRADA-238	ENST00000639603	ATF5	Q9Y2D1	282 aa	Predicted RBP	11.54	□□□□□ -0.56
STRADA-238	ENST00000639603	LRPPRC	P42704	1394 aa	Known RBP	11.54	□□□□□ -0.56
STRADA-238	ENST00000639603	ROBO2	Q9HCK4	1378 aa		11.54	□□□□□ -0.56
STRADA-238	ENST00000639603	RGPD1	P0DJD0	1748 aa		11.53	□□□□□ -0.56
STRADA-238	ENST00000639603	RGPD8	O14715	1765 aa	Predicted RBP	11.52	□□□□□ -0.57
STRADA-238	ENST00000639603	VGF	O15240	615 aa	Predicted RBP	11.52	□□□□□ -0.57
STRADA-238	ENST00000639603	GJD4	Q96KN9	370 aa	Predicted RBP	11.52	□□□□□ -0.57
STRADA-238	ENST00000639603	RALGAPB	Q86X10	1494 aa		11.51	□□□□□ -0.57
STRADA-238	ENST00000639603	SLIT2	O94813	1529 aa		11.51	□□□□□ -0.57
STRADA-238	ENST00000639603	ZNF219	Q9P2Y4	722 aa	Predicted RBP	11.51	□□□□□ -0.57
STRADA-238	ENST00000639603	SF3B2	Q13435	895 aa	Known RBP	11.49	□□□□□ -0.57
STRADA-238	ENST00000639603	RPGRIP1L	Q68CZ1	1315 aa		11.49	□□□□□ -0.57
STRADA-238	ENST00000639603	CCDC144A	A2RUR9	1427 aa		11.49	□□□□□ -0.57
STRADA-238	ENST00000639603	NRAP	Q86VF7	1730 aa		11.49	□□□□□ -0.57
STRADA-238	ENST00000639603	ESCO1	Q5FWF5	840 aa		11.48	□□□□□ -0.57
STRADA-238	ENST00000639603	UNC5CL	Q8IV45	518 aa		11.48	□□□□□ -0.57
STRADA-238	ENST00000639603	SPINK5	Q9NQ38	1064 aa	Predicted RBP	11.48	□□□□□ -0.57
STRADA-238	ENST00000639603	NAIP	Q13075	1403 aa		11.48	□□□□□ -0.57
STRADA-238	ENST00000639603	TECPR2	O15040	1411 aa		11.47	□□□□□ -0.57
STRADA-238	ENST00000639603	TNS1	Q9HBL0	1735 aa	Known RBP	11.46	□□□□□ -0.58
STRADA-238	ENST00000639603	SPATA31A3	Q5VYP0	1347 aa		11.44	□□□□□ -0.58
STRADA-238	ENST00000639603	FOXO3	O43524	673 aa		11.44	□□□□□ -0.58
STRADA-238	ENST00000639603	ITGAE	P38570	1179 aa		11.44	□□□□□ -0.58
STRADA-238	ENST00000639603	COL14A1	Q05707	1796 aa	Known RBP	11.44	□□□□□ -0.58
STRADA-238	ENST00000639603	TNS3	Q68CZ2	1445 aa		11.43	□□□□□ -0.58
STRADA-238	ENST00000639603	RRBP1	Q9P2E9	1410 aa	Known RBP	11.43	□□□□□ -0.58
STRADA-238	ENST00000639603	ADGRB2	O60241	1585 aa		11.42	□□□□□ -0.58
STRADA-238	ENST00000639603	CAPN15	O75808	1086 aa		11.42	□□□□□ -0.58
STRADA-238	ENST00000639603	XPC	Q01831	940 aa	Predicted RBP	11.42	□□□□□ -0.58
STRADA-238	ENST00000639603	VPS72	Q15906	364 aa		11.42	□□□□□ -0.58
STRADA-238	ENST00000639603	DEFB132	Q7Z7B7	95 aa		11.42	□□□□□ -0.58
STRADA-238	ENST00000639603	TRPM3	Q9HCF6	1732 aa	Predicted RBP	11.41	□□□□□ -0.58
STRADA-238	ENST00000639603	CRYBG1	Q9Y4K1	1723 aa		11.41	□□□□□ -0.58
STRADA-238	ENST00000639603	ALS2	Q96Q42	1657 aa		11.41	□□□□□ -0.58
STRADA-238	ENST00000639603	BAG6	P46379	1132 aa		11.41	□□□□□ -0.58
STRADA-238	ENST00000639603	CACNB1	Q02641	598 aa	Predicted RBP	11.41	□□□□□ -0.58
STRADA-238	ENST00000639603	SEPT12	Q8IYM1	358 aa		11.41	□□□□□ -0.58
STRADA-238	ENST00000639603	HAP1	P54257	671 aa	Predicted RBP	11.4	□□□□□ -0.58
STRADA-238	ENST00000639603	KRT27	Q7Z3Y8	459 aa		11.4	□□□□□ -0.58
STRADA-238	ENST00000639603	ARHGEF10	O15013	1369 aa		11.4	□□□□□ -0.59
STRADA-238	ENST00000639603	ABCC11	Q96J66	1382 aa		11.4	□□□□□ -0.59
STRADA-238	ENST00000639603	THSD7A	Q9UPZ6	1657 aa		11.4	□□□□□ -0.59
STRADA-238	ENST00000639603	NRXN1	Q9ULB1	1477 aa		11.39	□□□□□ -0.59
STRADA-238	ENST00000639603	ONECUT3	O60422	494 aa	Predicted RBP	11.39	□□□□□ -0.59
STRADA-238	ENST00000639603	RREB1	Q92766	1687 aa		11.39	□□□□□ -0.59
STRADA-238	ENST00000639603	SBNO1	A3KN83	1393 aa		11.39	□□□□□ -0.59
STRADA-238	ENST00000639603	ANKRD30B	Q9BXX2	1392 aa		11.39	□□□□□ -0.59
STRADA-238	ENST00000639603	DISP2	A7MBM2	1401 aa		11.38	□□□□□ -0.59
STRADA-238	ENST00000639603	PSME1	Q06323	249 aa		11.38	□□□□□ -0.59
STRADA-238	ENST00000639603	CCDC9	Q9Y3X0	531 aa	Known RBP	11.38	□□□□□ -0.59
STRADA-238	ENST00000639603	ITSN1	Q15811	1721 aa		11.38	□□□□□ -0.59
STRADA-238	ENST00000639603	PIK3C2G	O75747	1445 aa		11.37	□□□□□ -0.59
STRADA-238	ENST00000639603	NUTM2F	A1L443	756 aa		11.37	□□□□□ -0.59
STRADA-238	ENST00000639603	HRC	P23327	699 aa		11.37	□□□□□ -0.59
STRADA-238	ENST00000639603	KRT28	Q7Z3Y7	464 aa		11.37	□□□□□ -0.59
STRADA-238	ENST00000639603	YTHDC2	Q9H6S0	1430 aa	Known RBP	11.36	□□□□□ -0.59
STRADA-238	ENST00000639603	NUP188	Q5SRE5	1749 aa		11.35	□□□□□ -0.59
STRADA-238	ENST00000639603		A0A0G2JS52	829 aa		11.35	□□□□□ -0.59

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