RNA–Protein interactions for RNA: ENST00000639599.1

TARDBP-231, Transcript of TAR DNA binding protein, humanhuman

TSL 5

Gene TARDBP, Length 1,283 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-231ENST00000639599 QTRT2Q9H974 415 aaKnown RBP21.72■■□□□ 1.07
TARDBP-231ENST00000639599 SOS2Q07890 1332 aaPredicted RBP21.72■■□□□ 1.07
TARDBP-231ENST00000639599 LRPPRCP42704 1394 aaKnown RBP21.71■■□□□ 1.07
TARDBP-231ENST00000639599 RBM6P78332 1123 aaKnown RBP21.7■■□□□ 1.06
TARDBP-231ENST00000639599 SPATA31E1Q6ZUB1 1445 aa21.7■■□□□ 1.06
TARDBP-231ENST00000639599 CDK12Q9NYV4 1490 aaPredicted RBP21.7■■□□□ 1.06
TARDBP-231ENST00000639599 NUTM2FA1L443 756 aa21.69■■□□□ 1.06
TARDBP-231ENST00000639599 TMEM132EQ6IEE7 984 aa21.68■■□□□ 1.06
TARDBP-231ENST00000639599 WAPLQ7Z5K2 1190 aa21.68■■□□□ 1.06
TARDBP-231ENST00000639599 UPF1Q92900 1129 aaKnown RBP eCLIP21.68■■□□□ 1.062e-11■■■□□ 15.1
TARDBP-231ENST00000639599 CDC42BPGQ6DT37 1551 aa21.68■■□□□ 1.06
TARDBP-231ENST00000639599 USP21Q9UK80 565 aa21.67■■□□□ 1.06
TARDBP-231ENST00000639599 TECPR2O15040 1411 aa21.65■■□□□ 1.06
TARDBP-231ENST00000639599 PIK3C2GO75747 1445 aa21.65■■□□□ 1.06
TARDBP-231ENST00000639599 ABCC11Q96J66 1382 aa21.65■■□□□ 1.06
TARDBP-231ENST00000639599 FOXO3O43524 673 aa21.65■■□□□ 1.06
TARDBP-231ENST00000639599 XPCQ01831 940 aaPredicted RBP21.64■■□□□ 1.05
TARDBP-231ENST00000639599 TRPC5Q9UL62 973 aaPredicted RBP21.64■■□□□ 1.05
TARDBP-231ENST00000639599 YTHDC2Q9H6S0 1430 aaKnown RBP21.63■■□□□ 1.05
TARDBP-231ENST00000639599 DHX57Q6P158 1386 aaKnown RBP21.62■■□□□ 1.05
TARDBP-231ENST00000639599 HAP1P54257 671 aaPredicted RBP21.61■■□□□ 1.05
TARDBP-231ENST00000639599 LAMC1P11047 1609 aa21.61■■□□□ 1.05
TARDBP-231ENST00000639599 RGS12O14924 1447 aa21.61■■□□□ 1.05
TARDBP-231ENST00000639599 PLEKHH1Q9ULM0 1364 aa21.61■■□□□ 1.05
TARDBP-231ENST00000639599 C14orf93Q9H972 538 aaKnown RBP21.59■■□□□ 1.05
TARDBP-231ENST00000639599 POGKQ9P215 609 aa21.59■■□□□ 1.05
TARDBP-231ENST00000639599 CFAP70Q5T0N1 1121 aa21.58■■□□□ 1.05
TARDBP-231ENST00000639599 RAB3GAP2Q9H2M9 1393 aa21.58■■□□□ 1.04
TARDBP-231ENST00000639599 SAFB2Q14151 953 aaKnown RBP eCLIP21.57■■□□□ 1.04
TARDBP-231ENST00000639599 PSME1Q06323 249 aa21.56■■□□□ 1.04
TARDBP-231ENST00000639599 FNBP4Q8N3X1 1017 aaPredicted RBP21.56■■□□□ 1.04
TARDBP-231ENST00000639599 SIRT1Q96EB6 747 aa21.56■■□□□ 1.04
TARDBP-231ENST00000639599 MYOM2P54296 1465 aa21.56■■□□□ 1.04
TARDBP-231ENST00000639599 PXDNQ92626 1479 aa21.56■■□□□ 1.04
TARDBP-231ENST00000639599 IFT172Q9UG01 1749 aa21.55■■□□□ 1.04
TARDBP-231ENST00000639599 PRAM1Q96QH2 718 aa21.55■■□□□ 1.04
TARDBP-231ENST00000639599 ATAD2Q6PL18 1390 aa21.55■■□□□ 1.04
TARDBP-231ENST00000639599 KNDC1Q76NI1 1749 aa21.55■■□□□ 1.04
TARDBP-231ENST00000639599 KRT28Q7Z3Y7 464 aa21.54■■□□□ 1.04
TARDBP-231ENST00000639599 LMOD2Q6P5Q4 547 aa21.53■■□□□ 1.04
TARDBP-231ENST00000639599 PHF8Q9UPP1 1060 aa21.53■■□□□ 1.04
TARDBP-231ENST00000639599 COL22A1Q8NFW1 1626 aaPredicted RBP21.53■■□□□ 1.04
TARDBP-231ENST00000639599 PLEKHG5O94827 1062 aa21.51■■□□□ 1.03
TARDBP-231ENST00000639599 KDM2AQ9Y2K7 1162 aa21.51■■□□□ 1.03
TARDBP-231ENST00000639599 SPATA31A3Q5VYP0 1347 aa21.51■■□□□ 1.03
TARDBP-231ENST00000639599 KIF1AQ12756 1690 aa21.5■■□□□ 1.03
TARDBP-231ENST00000639599 ATRNO75882 1429 aa21.5■■□□□ 1.03
TARDBP-231ENST00000639599 NRXN1Q9ULB1 1477 aa21.5■■□□□ 1.03
TARDBP-231ENST00000639599 FMN2Q9NZ56 1722 aa21.47■■□□□ 1.03
TARDBP-231ENST00000639599 DCAF11Q8TEB1 546 aa21.47■■□□□ 1.03
TARDBP-231ENST00000639599 TRAK1Q9UPV9 953 aa21.47■■□□□ 1.03
TARDBP-231ENST00000639599 EIF3AQ14152 1382 aaKnown RBP21.47■■□□□ 1.03
TARDBP-231ENST00000639599 TNS3Q68CZ2 1445 aa21.46■■□□□ 1.03
TARDBP-231ENST00000639599 UNC5CLQ8IV45 518 aa21.45■■□□□ 1.02
TARDBP-231ENST00000639599 GJD4Q96KN9 370 aaPredicted RBP21.45■■□□□ 1.02
TARDBP-231ENST00000639599 PMFBP1Q8TBY8 1022 aa21.44■■□□□ 1.02
TARDBP-231ENST00000639599 STAC3Q96MF2 364 aa21.44■■□□□ 1.02
TARDBP-231ENST00000639599 CCDC9Q9Y3X0 531 aaKnown RBP21.44■■□□□ 1.02
TARDBP-231ENST00000639599 ARHGEF10O15013 1369 aa21.44■■□□□ 1.02
TARDBP-231ENST00000639599 HIRIP3Q9BW71 556 aaPredicted RBP21.43■■□□□ 1.02
TARDBP-231ENST00000639599 ANKARQ7Z5J8 1434 aa21.43■■□□□ 1.02
TARDBP-231ENST00000639599 BCL9LQ86UU0 1499 aa21.43■■□□□ 1.02
TARDBP-231ENST00000639599 DLC1Q96QB1 1528 aa21.43■■□□□ 1.02
TARDBP-231ENST00000639599 SBNO1A3KN83 1393 aa21.42■■□□□ 1.02
TARDBP-231ENST00000639599 GPRASP1Q5JY77 1395 aa21.42■■□□□ 1.02
TARDBP-231ENST00000639599 MINK1Q8N4C8 1332 aaPredicted RBP21.42■■□□□ 1.02
TARDBP-231ENST00000639599 CABLES1Q8TDN4 633 aa21.39■■□□□ 1.01
TARDBP-231ENST00000639599 A0A0G2JS52 829 aa21.38■■□□□ 1.01
TARDBP-231ENST00000639599 HRCP23327 699 aa21.38■■□□□ 1.01
TARDBP-231ENST00000639599 MYT1Q01538 1121 aa21.38■■□□□ 1.01
TARDBP-231ENST00000639599 CCDC125Q86Z20 511 aa21.38■■□□□ 1.01
TARDBP-231ENST00000639599 NGDNQ8NEJ9 315 aaKnown RBP21.37■■□□□ 1.01
TARDBP-231ENST00000639599 USP32Q8NFA0 1604 aa21.37■■□□□ 1.01
TARDBP-231ENST00000639599 SLIT2O94813 1529 aa21.36■■□□□ 1.01
TARDBP-231ENST00000639599 RALGAPBQ86X10 1494 aa21.35■■□□□ 1.01
TARDBP-231ENST00000639599 WASLO00401 505 aaPredicted RBP21.35■■□□□ 1.01
TARDBP-231ENST00000639599 PAK3O75914 559 aaPredicted RBP21.35■■□□□ 1.01
TARDBP-231ENST00000639599 SF3B2Q13435 895 aaKnown RBP21.35■■□□□ 1.01
TARDBP-231ENST00000639599 ZRANB1Q9UGI0 708 aa21.35■■□□□ 1.01
TARDBP-231ENST00000639599 ADGRB1O14514 1584 aa21.35■■□□□ 1.01
TARDBP-231ENST00000639599 ADGRB2O60241 1585 aa21.34■■□□□ 1.01
TARDBP-231ENST00000639599 MARF1Q9Y4F3 1742 aaKnown RBP21.34■■□□□ 1.01
TARDBP-231ENST00000639599 VPS72Q15906 364 aa21.33■■□□□ 1.01
TARDBP-231ENST00000639599 TULP4Q9NRJ4 1543 aa21.32■■□□□ 1
TARDBP-231ENST00000639599 SEPT12Q8IYM1 358 aa21.31■■□□□ 1
TARDBP-231ENST00000639599 TNKS1BP1Q9C0C2 1729 aaKnown RBP21.3■■□□□ 1
TARDBP-231ENST00000639599 PRR36Q9H6K5 1346 aa21.28■■□□□ 1
TARDBP-231ENST00000639599 RGPD8O14715 1765 aaPredicted RBP21.26■□□□□ 0.99
TARDBP-231ENST00000639599 FAM83GA6ND36 823 aa21.26■□□□□ 0.99
TARDBP-231ENST00000639599 BTG4Q9NY30 223 aa21.26■□□□□ 0.99
TARDBP-231ENST00000639599 BLMP54132 1417 aaPredicted RBP21.26■□□□□ 0.99
TARDBP-231ENST00000639599 GLI3P10071 1580 aa21.26■□□□□ 0.99
TARDBP-231ENST00000639599 KRT27Q7Z3Y8 459 aa21.25■□□□□ 0.99
TARDBP-231ENST00000639599 NUDT16Q96DE0 195 aaKnown RBP21.25■□□□□ 0.99
TARDBP-231ENST00000639599 PRDM11Q9NQV5 511 aa21.25■□□□□ 0.99
TARDBP-231ENST00000639599 FAM98CQ17RN3 349 aaKnown RBP21.22■□□□□ 0.99
TARDBP-231ENST00000639599 CDK19Q9BWU1 502 aa21.22■□□□□ 0.99
TARDBP-231ENST00000639599 PLCH1Q4KWH8 1693 aa21.21■□□□□ 0.99
TARDBP-231ENST00000639599 NWD2Q9ULI1 1742 aa21.21■□□□□ 0.99
TARDBP-231ENST00000639599 SRPK2P78362 688 aaKnown RBP21.19■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 9.2 ms