RNA–Protein interactions for RNA: ENST00000639566.1

PRICKLE1-211, Transcript of prickle planar cell polarity protein 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PRICKLE1, Length 3,341 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRICKLE1-211ENST00000639566 SCAPERQ9BY12 1400 aa20.49■□□□□ 0.87
PRICKLE1-211ENST00000639566 HSP90AA1P07900 732 aaKnown RBP20.49■□□□□ 0.87
PRICKLE1-211ENST00000639566 HSP90AA2PQ14568 343 aaPredicted RBP20.49■□□□□ 0.87
PRICKLE1-211ENST00000639566 CHMP5Q9NZZ3 219 aa20.49■□□□□ 0.87
PRICKLE1-211ENST00000639566 KDM5AP29375 1690 aaKnown RBP20.48■□□□□ 0.87
PRICKLE1-211ENST00000639566 RLBP1P12271 317 aa20.48■□□□□ 0.87
PRICKLE1-211ENST00000639566 RARSP54136 660 aaKnown RBP20.47■□□□□ 0.87
PRICKLE1-211ENST00000639566 CEP152O94986 1710 aa20.47■□□□□ 0.87
PRICKLE1-211ENST00000639566 SPHKAPQ2M3C7 1700 aa20.47■□□□□ 0.87
PRICKLE1-211ENST00000639566 TNNQ9UQP3 1299 aa20.46■□□□□ 0.87
PRICKLE1-211ENST00000639566 VSIG10Q8N0Z9 540 aa20.45■□□□□ 0.86
PRICKLE1-211ENST00000639566 DUOX2Q9NRD8 1548 aa20.45■□□□□ 0.86
PRICKLE1-211ENST00000639566 NPM1P06748 294 aaKnown RBP eCLIP20.45■□□□□ 0.86
PRICKLE1-211ENST00000639566 ZMYND15Q9H091 742 aa20.44■□□□□ 0.86
PRICKLE1-211ENST00000639566 GRPEL1Q9HAV7 217 aa20.44■□□□□ 0.86
PRICKLE1-211ENST00000639566 C22orf23Q9BZE7 217 aa20.43■□□□□ 0.86
PRICKLE1-211ENST00000639566 RWDD1Q9H446 243 aaPredicted RBP20.43■□□□□ 0.86
PRICKLE1-211ENST00000639566 ERBB4Q15303 1308 aa20.42■□□□□ 0.86
PRICKLE1-211ENST00000639566 ZNF692Q9BU19 519 aaPredicted RBP20.42■□□□□ 0.86
PRICKLE1-211ENST00000639566 CFAP74Q9C0B2 1584 aa20.42■□□□□ 0.86
PRICKLE1-211ENST00000639566 ESPNB1AK53 854 aa20.42■□□□□ 0.86
PRICKLE1-211ENST00000639566 MYH16Q9H6N6 1097 aa20.42■□□□□ 0.86
PRICKLE1-211ENST00000639566 SHPRHQ149N8 1683 aa20.41■□□□□ 0.86
PRICKLE1-211ENST00000639566 POLR3AO14802 1390 aaPredicted RBP20.41■□□□□ 0.86
PRICKLE1-211ENST00000639566 ISY1Q9ULR0 285 aaKnown RBP20.41■□□□□ 0.86
PRICKLE1-211ENST00000639566 DDX11L8A8MPP1 907 aa20.4■□□□□ 0.86
PRICKLE1-211ENST00000639566 CARD14Q9BXL6 1004 aa20.39■□□□□ 0.86
PRICKLE1-211ENST00000639566 IQSEC2Q5JU85 1478 aa20.39■□□□□ 0.85
PRICKLE1-211ENST00000639566 PLCH2O75038 1416 aa20.39■□□□□ 0.85
PRICKLE1-211ENST00000639566 NCOA3Q9Y6Q9 1424 aa20.39■□□□□ 0.85
PRICKLE1-211ENST00000639566 ARHGAP5Q13017 1502 aa20.38■□□□□ 0.85
PRICKLE1-211ENST00000639566 MFAP1P55081 439 aaKnown RBP20.38■□□□□ 0.85
PRICKLE1-211ENST00000639566 PHF23Q9BUL5 403 aaPredicted RBP20.38■□□□□ 0.85
PRICKLE1-211ENST00000639566 DDIT3P35638 169 aa20.37■□□□□ 0.85
PRICKLE1-211ENST00000639566 BCL2L13Q9BXK5 485 aa20.37■□□□□ 0.85
PRICKLE1-211ENST00000639566 ERVK-7P63135 1459 aa20.37■□□□□ 0.85
PRICKLE1-211ENST00000639566 TRPM2O94759 1503 aa20.35■□□□□ 0.85
PRICKLE1-211ENST00000639566 RRP7AQ9Y3A4 280 aaKnown RBP20.35■□□□□ 0.85
PRICKLE1-211ENST00000639566 KIAA1210Q9ULL0 1709 aa20.35■□□□□ 0.85
PRICKLE1-211ENST00000639566 NEUROD2Q15784 382 aa20.35■□□□□ 0.85
PRICKLE1-211ENST00000639566 HSCBQ8IWL3 235 aa20.34■□□□□ 0.85
PRICKLE1-211ENST00000639566 MVPQ14764 893 aaKnown RBP20.34■□□□□ 0.85
PRICKLE1-211ENST00000639566 WDR63Q8IWG1 891 aa20.33■□□□□ 0.85
PRICKLE1-211ENST00000639566 RUNDC1Q96C34 613 aa20.33■□□□□ 0.85
PRICKLE1-211ENST00000639566 STAC3Q96MF2 364 aa20.33■□□□□ 0.85
PRICKLE1-211ENST00000639566 CLTCL1P53675 1640 aa20.32■□□□□ 0.84
PRICKLE1-211ENST00000639566 TCP11L2Q8N4U5 519 aa20.32■□□□□ 0.84
PRICKLE1-211ENST00000639566 NEO1Q92859 1461 aa20.32■□□□□ 0.84
PRICKLE1-211ENST00000639566 CD109Q6YHK3 1445 aa20.32■□□□□ 0.84
PRICKLE1-211ENST00000639566 KANK1Q14678 1352 aa20.32■□□□□ 0.84
PRICKLE1-211ENST00000639566 GAS2L3Q86XJ1 694 aa20.32■□□□□ 0.84
PRICKLE1-211ENST00000639566 TSPOAP1O95153 1857 aa20.32■□□□□ 0.84
PRICKLE1-211ENST00000639566 ABCC1P33527 1531 aa20.31■□□□□ 0.84
PRICKLE1-211ENST00000639566 TRIM44Q96DX7 344 aaPredicted RBP20.29■□□□□ 0.84
PRICKLE1-211ENST00000639566 TNPO1Q92973 898 aaKnown RBP20.29■□□□□ 0.84
PRICKLE1-211ENST00000639566 RICTORQ6R327 1708 aa20.29■□□□□ 0.84
PRICKLE1-211ENST00000639566 TPM2P07951 284 aa20.28■□□□□ 0.84
PRICKLE1-211ENST00000639566 PTPRTO14522 1441 aa20.28■□□□□ 0.84
PRICKLE1-211ENST00000639566 FRMPD1Q5SYB0 1578 aa20.28■□□□□ 0.84
PRICKLE1-211ENST00000639566 SNX21Q969T3 373 aa20.28■□□□□ 0.84
PRICKLE1-211ENST00000639566 CCDC27Q2M243 656 aa20.27■□□□□ 0.84
PRICKLE1-211ENST00000639566 SMC5Q8IY18 1101 aa20.27■□□□□ 0.84
PRICKLE1-211ENST00000639566 HDAC1Q13547 482 aaPredicted RBP20.27■□□□□ 0.83
PRICKLE1-211ENST00000639566 RBM25P49756 843 aaKnown RBP20.26■□□□□ 0.83
PRICKLE1-211ENST00000639566 ZKSCAN2Q63HK3 967 aa20.26■□□□□ 0.83
PRICKLE1-211ENST00000639566 SLC24A1O60721 1099 aa20.26■□□□□ 0.83
PRICKLE1-211ENST00000639566 DZIP1LQ8IYY4 767 aaKnown RBP20.26■□□□□ 0.83
PRICKLE1-211ENST00000639566 CIZ1Q9ULV3 898 aaPredicted RBP20.26■□□□□ 0.83
PRICKLE1-211ENST00000639566 FANCAO15360 1455 aa20.25■□□□□ 0.83
PRICKLE1-211ENST00000639566 FAM69CQ0P6D2 419 aa20.25■□□□□ 0.83
PRICKLE1-211ENST00000639566 RAB3GAP1Q15042 981 aa20.24■□□□□ 0.83
PRICKLE1-211ENST00000639566 FTSJ3Q8IY81 847 aaKnown RBP20.24■□□□□ 0.83
PRICKLE1-211ENST00000639566 ABCA6Q8N139 1617 aa20.24■□□□□ 0.83
PRICKLE1-211ENST00000639566 GBP4Q96PP9 640 aa20.24■□□□□ 0.83
PRICKLE1-211ENST00000639566 SKOR2Q2VWA4 1001 aaPredicted RBP20.23■□□□□ 0.83
PRICKLE1-211ENST00000639566 NSD3Q9BZ95 1437 aa20.22■□□□□ 0.83
PRICKLE1-211ENST00000639566 MORC1Q86VD1 984 aa20.22■□□□□ 0.83
PRICKLE1-211ENST00000639566 MYO3AQ8NEV4 1616 aa20.22■□□□□ 0.83
PRICKLE1-211ENST00000639566 ZNF518AQ6AHZ1 1483 aa20.21■□□□□ 0.83
PRICKLE1-211ENST00000639566 CFAP70Q5T0N1 1121 aa20.21■□□□□ 0.83
PRICKLE1-211ENST00000639566 TNNT2P45379 298 aaPredicted RBP20.2■□□□□ 0.82
PRICKLE1-211ENST00000639566 PDCL3Q9H2J4 239 aa20.2■□□□□ 0.82
PRICKLE1-211ENST00000639566 PTMSP20962 102 aa20.19■□□□□ 0.82
PRICKLE1-211ENST00000639566 NCBP3Q53F19 620 aaKnown RBP20.19■□□□□ 0.82
PRICKLE1-211ENST00000639566 PPP1R9BQ96SB3 815 aa20.19■□□□□ 0.82
PRICKLE1-211ENST00000639566 TRIM27P14373 513 aa20.19■□□□□ 0.82
PRICKLE1-211ENST00000639566 CCDC173Q0VFZ6 552 aa20.19■□□□□ 0.82
PRICKLE1-211ENST00000639566 NEURL4Q96JN8 1562 aa20.19■□□□□ 0.82
PRICKLE1-211ENST00000639566 SBNO2Q9Y2G9 1366 aa20.19■□□□□ 0.82
PRICKLE1-211ENST00000639566 KIAA1211Q6ZU35 1233 aa20.19■□□□□ 0.82
PRICKLE1-211ENST00000639566 ADGRB2O60241 1585 aa20.18■□□□□ 0.82
PRICKLE1-211ENST00000639566 HSP90AB1P08238 724 aaKnown RBP20.18■□□□□ 0.82
PRICKLE1-211ENST00000639566 MYOM2P54296 1465 aa20.18■□□□□ 0.82
PRICKLE1-211ENST00000639566 CT47B1P0C2W7 299 aaPredicted RBP20.17■□□□□ 0.82
PRICKLE1-211ENST00000639566 DDX19BQ9UMR2 479 aa20.17■□□□□ 0.82
PRICKLE1-211ENST00000639566 TET3O43151 1660 aa20.17■□□□□ 0.82
PRICKLE1-211ENST00000639566 KIF2CQ99661 725 aa20.17■□□□□ 0.82
PRICKLE1-211ENST00000639566 INO80Q9ULG1 1556 aaPredicted RBP20.16■□□□□ 0.82
PRICKLE1-211ENST00000639566 DEPDC5O75140 1603 aa20.16■□□□□ 0.82
PRICKLE1-211ENST00000639566 ITPRIPQ8IWB1 547 aa20.15■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms