RNA–Protein interactions for RNA: ENST00000639487.1

RTTN-215, Transcript of rotatin, humanhuman

TSL 5

Gene RTTN, Length 3,175 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTTN-215ENST00000639487 TBX22Q9Y458 520 aa10□□□□□ -0.81
RTTN-215ENST00000639487 NFAT5O94916 1531 aa10□□□□□ -0.81
RTTN-215ENST00000639487 POLR3AO14802 1390 aaPredicted RBP10□□□□□ -0.81
RTTN-215ENST00000639487 TNS1Q9HBL0 1735 aaKnown RBP9.99□□□□□ -0.81
RTTN-215ENST00000639487 SBF2Q86WG5 1849 aa9.98□□□□□ -0.81
RTTN-215ENST00000639487 LY75O60449 1722 aa9.98□□□□□ -0.81
RTTN-215ENST00000639487 PLPPR3Q6T4P5 718 aa9.98□□□□□ -0.81
RTTN-215ENST00000639487 NHSQ6T4R5 1651 aa9.97□□□□□ -0.81
RTTN-215ENST00000639487 DUOX1Q9NRD9 1551 aa9.96□□□□□ -0.82
RTTN-215ENST00000639487 SBNO1A3KN83 1393 aa9.95□□□□□ -0.82
RTTN-215ENST00000639487 APLP2Q06481 763 aa9.95□□□□□ -0.82
RTTN-215ENST00000639487 LAMB4A4D0S4 1761 aa9.94□□□□□ -0.82
RTTN-215ENST00000639487 CPSF1Q10570 1443 aaKnown RBP9.94□□□□□ -0.82
RTTN-215ENST00000639487 USP31Q70CQ4 1352 aa9.94□□□□□ -0.82
RTTN-215ENST00000639487 ZNF644Q9H582 1327 aaPredicted RBP9.93□□□□□ -0.82
RTTN-215ENST00000639487 ARFGEF2Q9Y6D5 1785 aa9.93□□□□□ -0.82
RTTN-215ENST00000639487 CD163L1Q9NR16 1453 aa9.93□□□□□ -0.82
RTTN-215ENST00000639487 YTHDC2Q9H6S0 1430 aaKnown RBP9.92□□□□□ -0.82
RTTN-215ENST00000639487 C5P01031 1676 aa9.92□□□□□ -0.82
RTTN-215ENST00000639487 LRP5O75197 1615 aa9.92□□□□□ -0.82
RTTN-215ENST00000639487 AFAP1Q8N556 730 aa9.91□□□□□ -0.82
RTTN-215ENST00000639487 HDGFP51858 240 aaKnown RBP9.91□□□□□ -0.82
RTTN-215ENST00000639487 HNRNPMP52272 730 aaKnown RBP eCLIP9.91□□□□□ -0.82
RTTN-215ENST00000639487 KTN1Q86UP2 1357 aaKnown RBP9.91□□□□□ -0.82
RTTN-215ENST00000639487 NCBP3Q53F19 620 aaKnown RBP9.9□□□□□ -0.82
RTTN-215ENST00000639487 COL5A3P25940 1745 aaPredicted RBP9.9□□□□□ -0.82
RTTN-215ENST00000639487 ERICH6Q7L0X2 663 aa9.9□□□□□ -0.82
RTTN-215ENST00000639487 LAMB1P07942 1786 aa9.9□□□□□ -0.83
RTTN-215ENST00000639487 OVOS2A0A0G2JMS6 1433 aa9.89□□□□□ -0.83
RTTN-215ENST00000639487 NSD2O96028 1365 aa9.89□□□□□ -0.83
RTTN-215ENST00000639487 IBTKQ9P2D0 1353 aaPredicted RBP9.88□□□□□ -0.83
RTTN-215ENST00000639487 KIF13BQ9NQT8 1826 aa9.88□□□□□ -0.83
RTTN-215ENST00000639487 C4AP0C0L4 1744 aa9.88□□□□□ -0.83
RTTN-215ENST00000639487 C4BP0C0L5 1744 aa9.88□□□□□ -0.83
RTTN-215ENST00000639487 RAPGEF3O95398 923 aa9.87□□□□□ -0.83
RTTN-215ENST00000639487 C14orf93Q9H972 538 aaKnown RBP9.87□□□□□ -0.83
RTTN-215ENST00000639487 MRC1P22897 1456 aa9.87□□□□□ -0.83
RTTN-215ENST00000639487 SCN11AQ9UI33 1791 aa9.87□□□□□ -0.83
RTTN-215ENST00000639487 THEMISQ8N1K5 641 aaPredicted RBP9.87□□□□□ -0.83
RTTN-215ENST00000639487 LAMB2P55268 1798 aa9.86□□□□□ -0.83
RTTN-215ENST00000639487 KDM3BQ7LBC6 1761 aa9.86□□□□□ -0.83
RTTN-215ENST00000639487 DAXXQ9UER7 740 aaPredicted RBP9.84□□□□□ -0.83
RTTN-215ENST00000639487 DLEC1Q9Y238 1755 aa9.83□□□□□ -0.84
RTTN-215ENST00000639487 MAP2P11137 1827 aaKnown RBP9.83□□□□□ -0.84
RTTN-215ENST00000639487 CACNA1FO60840 1977 aa9.83□□□□□ -0.84
RTTN-215ENST00000639487 CFAP65Q6ZU64 1925 aaKnown RBP9.83□□□□□ -0.84
RTTN-215ENST00000639487 CASZ1Q86V15 1759 aa9.83□□□□□ -0.84
RTTN-215ENST00000639487 TRIM26Q12899 539 aaPredicted RBP9.83□□□□□ -0.84
RTTN-215ENST00000639487 BCORQ6W2J9 1755 aa9.82□□□□□ -0.84
RTTN-215ENST00000639487 RTL1A6NKG5 1358 aa9.82□□□□□ -0.84
RTTN-215ENST00000639487 CPDO75976 1380 aa9.82□□□□□ -0.84
RTTN-215ENST00000639487 KCNA6P17658 529 aa9.82□□□□□ -0.84
RTTN-215ENST00000639487 NUP188Q5SRE5 1749 aa9.82□□□□□ -0.84
RTTN-215ENST00000639487 DISP2A7MBM2 1401 aa9.82□□□□□ -0.84
RTTN-215ENST00000639487 MPHOSPH9Q99550 1183 aa9.81□□□□□ -0.84
RTTN-215ENST00000639487 TAF1LQ8IZX4 1826 aa9.81□□□□□ -0.84
RTTN-215ENST00000639487 LOC105371045A0A1W2PR82 267 aa9.8□□□□□ -0.84
RTTN-215ENST00000639487 COL3A1P02461 1466 aaPredicted RBP9.8□□□□□ -0.84
RTTN-215ENST00000639487 OVOS2A0A0J9YW53 1432 aa9.79□□□□□ -0.84
RTTN-215ENST00000639487 OVOS2Q6IE36 1432 aa9.79□□□□□ -0.84
RTTN-215ENST00000639487 C1orf167Q5SNV9 1468 aa9.79□□□□□ -0.84
RTTN-215ENST00000639487 NRXN2Q9P2S2 1712 aa9.79□□□□□ -0.84
RTTN-215ENST00000639487 P3H3Q8IVL6 736 aa9.79□□□□□ -0.84
RTTN-215ENST00000639487 ROCK2O75116 1388 aaKnown RBP9.79□□□□□ -0.84
RTTN-215ENST00000639487 WASHC2AQ641Q2 1341 aa9.79□□□□□ -0.84
RTTN-215ENST00000639487 WASHC2CQ9Y4E1 1318 aa9.79□□□□□ -0.84
RTTN-215ENST00000639487 SLIT2O94813 1529 aa9.77□□□□□ -0.84
RTTN-215ENST00000639487 BLMP54132 1417 aaPredicted RBP9.77□□□□□ -0.84
RTTN-215ENST00000639487 AATKQ6ZMQ8 1374 aa9.77□□□□□ -0.85
RTTN-215ENST00000639487 USP19O94966 1318 aa9.76□□□□□ -0.85
RTTN-215ENST00000639487 RGPD5Q99666 1765 aa9.75□□□□□ -0.85
RTTN-215ENST00000639487 BRWD3Q6RI45 1802 aa9.75□□□□□ -0.85
RTTN-215ENST00000639487 VGFO15240 615 aaPredicted RBP9.75□□□□□ -0.85
RTTN-215ENST00000639487 EDC4Q6P2E9 1401 aaKnown RBP9.74□□□□□ -0.85
RTTN-215ENST00000639487 TOGARAM1Q9Y4F4 1720 aa9.73□□□□□ -0.85
RTTN-215ENST00000639487 ATAD2Q6PL18 1390 aa9.73□□□□□ -0.85
RTTN-215ENST00000639487 RGS12O14924 1447 aa9.72□□□□□ -0.85
RTTN-215ENST00000639487 TNS3Q68CZ2 1445 aa9.72□□□□□ -0.85
RTTN-215ENST00000639487 KCNH8Q96L42 1107 aa9.72□□□□□ -0.85
RTTN-215ENST00000639487 ANKRD36CQ5JPF3 1778 aa9.71□□□□□ -0.86
RTTN-215ENST00000639487 ITGB4P16144 1822 aa9.71□□□□□ -0.86
RTTN-215ENST00000639487 KIF3BO15066 747 aa9.71□□□□□ -0.86
RTTN-215ENST00000639487 ATRNO75882 1429 aa9.7□□□□□ -0.86
RTTN-215ENST00000639487 KIAA1551Q9HCM1 1747 aa9.7□□□□□ -0.86
RTTN-215ENST00000639487 ANKLE2Q86XL3 938 aa9.7□□□□□ -0.86
RTTN-215ENST00000639487 TUBGCP6Q96RT7 1819 aa9.69□□□□□ -0.86
RTTN-215ENST00000639487 PLEKHG3A1L390 1219 aa9.69□□□□□ -0.86
RTTN-215ENST00000639487 SCN7AQ01118 1682 aa9.69□□□□□ -0.86
RTTN-215ENST00000639487 SOS2Q07890 1332 aaPredicted RBP9.69□□□□□ -0.86
RTTN-215ENST00000639487 IDI1Q13907 227 aa9.69□□□□□ -0.86
RTTN-215ENST00000639487 TJP1Q07157 1748 aa9.68□□□□□ -0.86
RTTN-215ENST00000639487 PPIP5K1Q6PFW1 1433 aa9.68□□□□□ -0.86
RTTN-215ENST00000639487 METP08581 1390 aa9.68□□□□□ -0.86
RTTN-215ENST00000639487 DLG5Q8TDM6 1919 aa9.68□□□□□ -0.86
RTTN-215ENST00000639487 DDX60Q8IY21 1712 aaKnown RBP9.66□□□□□ -0.86
RTTN-215ENST00000639487 ARHGEF10O15013 1369 aa9.66□□□□□ -0.86
RTTN-215ENST00000639487 ROBO2Q9HCK4 1378 aa9.66□□□□□ -0.86
RTTN-215ENST00000639487 USP6P35125 1406 aa9.66□□□□□ -0.86
RTTN-215ENST00000639487 PNPLA6Q8IY17 1366 aa9.66□□□□□ -0.86
RTTN-215ENST00000639487 SPATA31A6Q5VVP1 1343 aa9.65□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms