RNA–Protein interactions for RNA: ENST00000639290.1

CCDC7-213, Transcript of coiled-coil domain containing 7, humanhuman

TSL 1 (best)

Gene CCDC7, Length 2,542 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-213ENST00000639290 ATP10DQ9P241 1426 aa6.26□□□□□ -1.41
CCDC7-213ENST00000639290 UNC5CLQ8IV45 518 aa6.26□□□□□ -1.41
CCDC7-213ENST00000639290 SEPT12Q8IYM1 358 aa6.26□□□□□ -1.41
CCDC7-213ENST00000639290 PITPNM2Q9BZ72 1349 aa6.26□□□□□ -1.41
CCDC7-213ENST00000639290 MST1RQ04912 1400 aa6.26□□□□□ -1.41
CCDC7-213ENST00000639290 ADCY9O60503 1353 aa6.26□□□□□ -1.41
CCDC7-213ENST00000639290 FAM161AQ3B820 660 aa6.25□□□□□ -1.41
CCDC7-213ENST00000639290 ADAMTS2O95450 1211 aa6.24□□□□□ -1.41
CCDC7-213ENST00000639290 HNRNPMP52272 730 aaKnown RBP eCLIP6.24□□□□□ -1.41
CCDC7-213ENST00000639290 VPS72Q15906 364 aa6.24□□□□□ -1.41
CCDC7-213ENST00000639290 SYT17Q9BSW7 474 aa6.24□□□□□ -1.41
CCDC7-213ENST00000639290 GPBP1L1Q9HC44 474 aaPredicted RBP6.24□□□□□ -1.41
CCDC7-213ENST00000639290 EFCAB6Q5THR3 1501 aa6.24□□□□□ -1.41
CCDC7-213ENST00000639290 SAMD1Q6SPF0 538 aaPredicted RBP6.24□□□□□ -1.41
CCDC7-213ENST00000639290 SPINK5Q9NQ38 1064 aaPredicted RBP6.24□□□□□ -1.41
CCDC7-213ENST00000639290 ARHGAP31Q2M1Z3 1444 aa6.23□□□□□ -1.41
CCDC7-213ENST00000639290 USP19O94966 1318 aa6.23□□□□□ -1.41
CCDC7-213ENST00000639290 SOS2Q07890 1332 aaPredicted RBP6.23□□□□□ -1.41
CCDC7-213ENST00000639290 PRXQ9BXM0 1461 aa6.23□□□□□ -1.41
CCDC7-213ENST00000639290 GRIN3BO60391 1043 aa6.23□□□□□ -1.41
CCDC7-213ENST00000639290 PRDM10Q9NQV6 1147 aa6.23□□□□□ -1.41
CCDC7-213ENST00000639290 EP400Q96L91 3159 aa6.22□□□□□ -1.41
CCDC7-213ENST00000639290 EZH2Q15910 746 aaKnown RBP6.22□□□□□ -1.41
CCDC7-213ENST00000639290 ZNF219Q9P2Y4 722 aaPredicted RBP6.22□□□□□ -1.41
CCDC7-213ENST00000639290 WASHC2CQ9Y4E1 1318 aa6.22□□□□□ -1.41
CCDC7-213ENST00000639290 DSG3P32926 999 aa6.22□□□□□ -1.41
CCDC7-213ENST00000639290 EHBP1L1Q8N3D4 1523 aa6.21□□□□□ -1.41
CCDC7-213ENST00000639290 CDC42BPAQ5VT25 1732 aa6.21□□□□□ -1.41
CCDC7-213ENST00000639290 PLEKHG1Q9ULL1 1385 aa6.21□□□□□ -1.41
CCDC7-213ENST00000639290 C11orf95C9JLR9 678 aaPredicted RBP6.21□□□□□ -1.42
CCDC7-213ENST00000639290 THSD7AQ9UPZ6 1657 aa6.21□□□□□ -1.42
CCDC7-213ENST00000639290 PTGER2P43116 358 aa6.21□□□□□ -1.42
CCDC7-213ENST00000639290 PIK3C2BO00750 1634 aa6.2□□□□□ -1.42
CCDC7-213ENST00000639290 EIF2AK4Q9P2K8 1649 aaKnown RBP6.2□□□□□ -1.42
CCDC7-213ENST00000639290 TBX22Q9Y458 520 aa6.2□□□□□ -1.42
CCDC7-213ENST00000639290 FHDC1Q9C0D6 1143 aaPredicted RBP6.19□□□□□ -1.42
CCDC7-213ENST00000639290 ARHGEF28Q8N1W1 1705 aaKnown RBP6.19□□□□□ -1.42
CCDC7-213ENST00000639290 TULP4Q9NRJ4 1543 aa6.18□□□□□ -1.42
CCDC7-213ENST00000639290 COL24A1Q17RW2 1714 aa6.18□□□□□ -1.42
CCDC7-213ENST00000639290 TOMM70O94826 608 aa6.18□□□□□ -1.42
CCDC7-213ENST00000639290 GPR162Q16538 588 aa6.18□□□□□ -1.42
CCDC7-213ENST00000639290 TRPM2O94759 1503 aa6.18□□□□□ -1.42
CCDC7-213ENST00000639290 PLCH1Q4KWH8 1693 aa6.17□□□□□ -1.42
CCDC7-213ENST00000639290 HSPA1AP0DMV8 641 aaKnown RBP6.17□□□□□ -1.42
CCDC7-213ENST00000639290 HSPA1BP0DMV9 641 aaKnown RBP6.17□□□□□ -1.42
CCDC7-213ENST00000639290 FSTL1Q12841 308 aa6.17□□□□□ -1.42
CCDC7-213ENST00000639290 FAM196AQ6ZSG2 479 aa6.17□□□□□ -1.42
CCDC7-213ENST00000639290 C14orf37Q86TY3 774 aa6.17□□□□□ -1.42
CCDC7-213ENST00000639290 C10orf71Q711Q0 1435 aa6.17□□□□□ -1.42
CCDC7-213ENST00000639290 KIF3CO14782 793 aa6.17□□□□□ -1.42
CCDC7-213ENST00000639290 MYCNP04198 464 aaPredicted RBP6.17□□□□□ -1.42
CCDC7-213ENST00000639290 RBM46Q8TBY0 533 aaKnown RBP6.17□□□□□ -1.42
CCDC7-213ENST00000639290 GCC1Q96CN9 775 aa6.17□□□□□ -1.42
CCDC7-213ENST00000639290 SGIP1Q9BQI5 828 aa6.16□□□□□ -1.42
CCDC7-213ENST00000639290 SLC4A1APQ9BWU0 796 aaKnown RBP6.16□□□□□ -1.42
CCDC7-213ENST00000639290 HDGFP51858 240 aaKnown RBP6.16□□□□□ -1.42
CCDC7-213ENST00000639290 MTFR1LQ9H019 292 aa6.16□□□□□ -1.42
CCDC7-213ENST00000639290 NOS1P29475 1434 aa6.15□□□□□ -1.42
CCDC7-213ENST00000639290 CEP350Q5VT06 3117 aa6.15□□□□□ -1.42
CCDC7-213ENST00000639290 XRN1Q8IZH2 1706 aaKnown RBP6.15□□□□□ -1.42
CCDC7-213ENST00000639290 ADGRL2O95490 1459 aa6.15□□□□□ -1.42
CCDC7-213ENST00000639290 NRAPQ86VF7 1730 aa6.15□□□□□ -1.43
CCDC7-213ENST00000639290 ADGRL3Q9HAR2 1447 aa6.14□□□□□ -1.43
CCDC7-213ENST00000639290 RRBP1Q9P2E9 1410 aaKnown RBP6.14□□□□□ -1.43
CCDC7-213ENST00000639290 PRPF38BQ5VTL8 546 aaKnown RBP6.14□□□□□ -1.43
CCDC7-213ENST00000639290 CEP152O94986 1710 aa6.14□□□□□ -1.43
CCDC7-213ENST00000639290 MTUS2Q5JR59 1369 aa6.14□□□□□ -1.43
CCDC7-213ENST00000639290 NALCNQ8IZF0 1738 aa6.14□□□□□ -1.43
CCDC7-213ENST00000639290 P3H3Q8IVL6 736 aa6.14□□□□□ -1.43
CCDC7-213ENST00000639290 CSRNP3Q8WYN3 585 aa6.14□□□□□ -1.43
CCDC7-213ENST00000639290 SLC26A8Q96RN1 970 aa6.14□□□□□ -1.43
CCDC7-213ENST00000639290 ABCA3Q99758 1704 aa6.13□□□□□ -1.43
CCDC7-213ENST00000639290 C1orf167Q5SNV9 1468 aa6.13□□□□□ -1.43
CCDC7-213ENST00000639290 ZFYVE9O95405 1425 aa6.13□□□□□ -1.43
CCDC7-213ENST00000639290 APBA3O96018 575 aa6.13□□□□□ -1.43
CCDC7-213ENST00000639290 ARXQ96QS3 562 aa6.13□□□□□ -1.43
CCDC7-213ENST00000639290 KIF3BO15066 747 aa6.12□□□□□ -1.43
CCDC7-213ENST00000639290 ABHD8Q96I13 439 aa6.12□□□□□ -1.43
CCDC7-213ENST00000639290 CCDC18Q5T9S5 1454 aa6.11□□□□□ -1.43
CCDC7-213ENST00000639290 PXDNQ92626 1479 aa6.11□□□□□ -1.43
CCDC7-213ENST00000639290 LRPPRCP42704 1394 aaKnown RBP6.11□□□□□ -1.43
CCDC7-213ENST00000639290 CICQ96RK0 1608 aaPredicted RBP6.11□□□□□ -1.43
CCDC7-213ENST00000639290 DHX57Q6P158 1386 aaKnown RBP6.1□□□□□ -1.43
CCDC7-213ENST00000639290 ABCB7O75027 752 aa6.1□□□□□ -1.43
CCDC7-213ENST00000639290 FOXD4L1Q9NU39 408 aa6.1□□□□□ -1.43
CCDC7-213ENST00000639290 PRAG1Q86YV5 1406 aa6.1□□□□□ -1.43
CCDC7-213ENST00000639290 PLSCR1O15162 318 aa6.09□□□□□ -1.43
CCDC7-213ENST00000639290 ARHGEF5Q12774 1597 aa6.09□□□□□ -1.43
CCDC7-213ENST00000639290 QSER1Q2KHR3 1735 aa6.09□□□□□ -1.43
CCDC7-213ENST00000639290 NPHP3Q7Z494 1330 aa6.09□□□□□ -1.43
CCDC7-213ENST00000639290 ADAMTS13Q76LX8 1427 aa6.09□□□□□ -1.44
CCDC7-213ENST00000639290 CTCFP49711 727 aaPredicted RBP6.08□□□□□ -1.44
CCDC7-213ENST00000639290 RSPH4AQ5TD94 716 aa6.08□□□□□ -1.44
CCDC7-213ENST00000639290 ABCF1Q8NE71 845 aaKnown RBP eCLIP6.08□□□□□ -1.44
CCDC7-213ENST00000639290 PXDNLA1KZ92 1463 aa6.08□□□□□ -1.44
CCDC7-213ENST00000639290 MBD5Q9P267 1494 aa6.08□□□□□ -1.44
CCDC7-213ENST00000639290 DLL1O00548 723 aa6.08□□□□□ -1.44
CCDC7-213ENST00000639290 COL14A1Q05707 1796 aaKnown RBP6.07□□□□□ -1.44
CCDC7-213ENST00000639290 STAG3Q9UJ98 1225 aa6.07□□□□□ -1.44
CCDC7-213ENST00000639290 LMTK2Q8IWU2 1503 aa6.07□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms