RNA–Protein interactions for RNA: ENST00000639240.1

ATM-228, Transcript of ATM serine/threonine kinase, humanhuman

TSL 5 BASIC

Gene ATM, Length 498 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATM-228ENST00000639240 MYT1Q01538 1121 aa7.76□□□□□ -1.17
ATM-228ENST00000639240 BARGINQ6ZT62 677 aa7.76□□□□□ -1.17
ATM-228ENST00000639240 ZC3H15Q8WU90 426 aaKnown RBP7.76□□□□□ -1.17
ATM-228ENST00000639240 GPCPD1Q9NPB8 672 aa7.76□□□□□ -1.17
ATM-228ENST00000639240 HOXA2O43364 376 aa7.75□□□□□ -1.17
ATM-228ENST00000639240 SYMPKQ92797 1274 aaKnown RBP7.75□□□□□ -1.17
ATM-228ENST00000639240 RPIAP49247 311 aa7.74□□□□□ -1.17
ATM-228ENST00000639240 MMP16P51512 607 aa7.74□□□□□ -1.17
ATM-228ENST00000639240 POTECB2RU33 542 aa7.73□□□□□ -1.17
ATM-228ENST00000639240 CLCN1P35523 988 aa7.73□□□□□ -1.17
ATM-228ENST00000639240 FOXC1Q12948 553 aa7.73□□□□□ -1.17
ATM-228ENST00000639240 GRIPAP1Q4V328 841 aa7.73□□□□□ -1.17
ATM-228ENST00000639240 PCDHGC3Q9UN70 934 aa7.73□□□□□ -1.17
ATM-228ENST00000639240 DGAT1O75907 488 aa7.72□□□□□ -1.17
ATM-228ENST00000639240 USB1Q9BQ65 265 aaKnown RBP7.72□□□□□ -1.17
ATM-228ENST00000639240 FAM187AA6NFU0 413 aa7.71□□□□□ -1.18
ATM-228ENST00000639240 DXOO77932 396 aaKnown RBP7.71□□□□□ -1.18
ATM-228ENST00000639240 TOR4AQ9NXH8 423 aa7.71□□□□□ -1.18
ATM-228ENST00000639240 SSTR3P32745 418 aaPredicted RBP7.7□□□□□ -1.18
ATM-228ENST00000639240 USP46P62068 366 aa7.7□□□□□ -1.18
ATM-228ENST00000639240 Q3C1V9 767 aa7.7□□□□□ -1.18
ATM-228ENST00000639240 PKDCCQ504Y2 493 aa7.7□□□□□ -1.18
ATM-228ENST00000639240 ST8SIA5O15466 376 aa7.69□□□□□ -1.18
ATM-228ENST00000639240 AMHR2Q16671 573 aa7.69□□□□□ -1.18
ATM-228ENST00000639240 KRI1Q8N9T8 703 aaKnown RBP7.69□□□□□ -1.18
ATM-228ENST00000639240 SPIRE2Q8WWL2 714 aa7.69□□□□□ -1.18
ATM-228ENST00000639240 CD2BP2O95400 341 aaKnown RBP7.68□□□□□ -1.18
ATM-228ENST00000639240 NDUFV2P19404 249 aa7.68□□□□□ -1.18
ATM-228ENST00000639240 AAASQ9NRG9 546 aa7.68□□□□□ -1.18
ATM-228ENST00000639240 DACH1Q9UI36 760 aa7.68□□□□□ -1.18
ATM-228ENST00000639240 TRIM32Q13049 653 aa7.67□□□□□ -1.18
ATM-228ENST00000639240 MOXD2PA6NHM9 499 aa7.66□□□□□ -1.18
ATM-228ENST00000639240 SKOR1P84550 965 aa7.66□□□□□ -1.18
ATM-228ENST00000639240 PTCRAQ6ISU1 281 aaPredicted RBP7.66□□□□□ -1.18
ATM-228ENST00000639240 GIGYF2Q6Y7W6 1299 aaKnown RBP7.66□□□□□ -1.18
ATM-228ENST00000639240 FDX1P10109 184 aa7.65□□□□□ -1.18
ATM-228ENST00000639240 NUTM1Q86Y26 1132 aa7.65□□□□□ -1.18
ATM-228ENST00000639240 TRIM66O15016 1216 aa7.64□□□□□ -1.19
ATM-228ENST00000639240 AVPP01185 164 aa7.64□□□□□ -1.19
ATM-228ENST00000639240 MS4A1P11836 297 aa7.64□□□□□ -1.19
ATM-228ENST00000639240 JUNDP17535 347 aa7.64□□□□□ -1.19
ATM-228ENST00000639240 PARP9Q8IXQ6 854 aa7.64□□□□□ -1.19
ATM-228ENST00000639240 CCDC24Q8N4L8 307 aa7.64□□□□□ -1.19
ATM-228ENST00000639240 WNT7AO00755 349 aa7.63□□□□□ -1.19
ATM-228ENST00000639240 ZBTB24O43167 697 aaPredicted RBP7.63□□□□□ -1.19
ATM-228ENST00000639240 TTLL12Q14166 644 aaPredicted RBP7.63□□□□□ -1.19
ATM-228ENST00000639240 RETREG3Q86VR2 466 aa7.63□□□□□ -1.19
ATM-228ENST00000639240 MRGPRX2Q96LB1 330 aa7.63□□□□□ -1.19
ATM-228ENST00000639240 SMPD1P17405 629 aa7.62□□□□□ -1.19
ATM-228ENST00000639240 CYP4X1Q8N118 509 aa7.62□□□□□ -1.19
ATM-228ENST00000639240 BEGAINQ9BUH8 593 aa7.62□□□□□ -1.19
ATM-228ENST00000639240 J3QL48 77 aa7.61□□□□□ -1.19
ATM-228ENST00000639240 CRIPAKQ8N1N5 446 aa7.61□□□□□ -1.19
ATM-228ENST00000639240 C6orf229H3BNL8 230 aa7.6□□□□□ -1.19
ATM-228ENST00000639240 PCDHB15Q9Y5E8 787 aa7.6□□□□□ -1.19
ATM-228ENST00000639240 RC3H1Q5TC82 1133 aaKnown RBP7.59□□□□□ -1.19
ATM-228ENST00000639240 SNIP1Q8TAD8 396 aaKnown RBP7.59□□□□□ -1.19
ATM-228ENST00000639240 NUDT12Q9BQG2 462 aa7.59□□□□□ -1.19
ATM-228ENST00000639240 TBC1D2Q9BYX2 928 aa7.59□□□□□ -1.19
ATM-228ENST00000639240 AK7Q96M32 723 aa7.58□□□□□ -1.2
ATM-228ENST00000639240 TTC24A2A3L6 582 aaPredicted RBP7.57□□□□□ -1.2
ATM-228ENST00000639240 SMCPP49901 116 aaPredicted RBP7.57□□□□□ -1.2
ATM-228ENST00000639240 RSBN1LQ6PCB5 846 aaPredicted RBP7.57□□□□□ -1.2
ATM-228ENST00000639240 HPS1Q92902 700 aa7.57□□□□□ -1.2
ATM-228ENST00000639240 SLC24A3Q9HC58 644 aa7.57□□□□□ -1.2
ATM-228ENST00000639240 GMPR2Q9P2T1 348 aaKnown RBP7.57□□□□□ -1.2
ATM-228ENST00000639240 SIAH2O43255 324 aa7.56□□□□□ -1.2
ATM-228ENST00000639240 PRR7Q8TB68 274 aa7.56□□□□□ -1.2
ATM-228ENST00000639240 AXIN1O15169 862 aa7.55□□□□□ -1.2
ATM-228ENST00000639240 WNT7BP56706 349 aa7.55□□□□□ -1.2
ATM-228ENST00000639240 SH3BP2P78314 561 aa7.55□□□□□ -1.2
ATM-228ENST00000639240 PDE4DQ08499 809 aa7.55□□□□□ -1.2
ATM-228ENST00000639240 LCE2AQ5TA79 106 aaPredicted RBP7.55□□□□□ -1.2
ATM-228ENST00000639240 EVA1BQ9NVM1 165 aa7.55□□□□□ -1.2
ATM-228ENST00000639240 CFAP99D6REC4 459 aa7.54□□□□□ -1.2
ATM-228ENST00000639240 SPTLC1O15269 473 aa7.54□□□□□ -1.2
ATM-228ENST00000639240 CCNYL3P0C7X3 344 aa7.54□□□□□ -1.2
ATM-228ENST00000639240 MTMR2Q13614 643 aa7.54□□□□□ -1.2
ATM-228ENST00000639240 HRCP23327 699 aa7.53□□□□□ -1.2
ATM-228ENST00000639240 PTPRNQ16849 979 aa7.53□□□□□ -1.2
ATM-228ENST00000639240 CTC1Q2NKJ3 1217 aa7.53□□□□□ -1.2
ATM-228ENST00000639240 CABLES1Q8TDN4 633 aa7.53□□□□□ -1.2
ATM-228ENST00000639240 LIMD1Q9UGP4 676 aa7.53□□□□□ -1.2
ATM-228ENST00000639240 GJA5P36382 358 aa7.52□□□□□ -1.21
ATM-228ENST00000639240 KCNH2Q12809 1159 aa7.52□□□□□ -1.21
ATM-228ENST00000639240 TREML4Q6UXN2 200 aa7.52□□□□□ -1.21
ATM-228ENST00000639240 BAP1Q92560 729 aa7.52□□□□□ -1.21
ATM-228ENST00000639240 UNC93B1Q9H1C4 597 aa7.52□□□□□ -1.21
ATM-228ENST00000639240 LINC01559Q495D7 138 aa7.51□□□□□ -1.21
ATM-228ENST00000639240 DESI1Q6ICB0 168 aa7.51□□□□□ -1.21
ATM-228ENST00000639240 RIC3Q7Z5B4 369 aa7.51□□□□□ -1.21
ATM-228ENST00000639240 STK17AQ9UEE5 414 aa7.51□□□□□ -1.21
ATM-228ENST00000639240 PER1O15534 1290 aaPredicted RBP7.5□□□□□ -1.21
ATM-228ENST00000639240 QPCTQ16769 361 aa7.5□□□□□ -1.21
ATM-228ENST00000639240 MYSM1Q5VVJ2 828 aa7.5□□□□□ -1.21
ATM-228ENST00000639240 LYPD8Q6UX82 237 aa7.5□□□□□ -1.21
ATM-228ENST00000639240 ATP13A2Q9NQ11 1180 aa7.5□□□□□ -1.21
ATM-228ENST00000639240 SPDYE5A6NIY4 337 aa7.49□□□□□ -1.21
ATM-228ENST00000639240 ALDH1A1P00352 501 aa7.49□□□□□ -1.21
ATM-228ENST00000639240 SNRPBP14678 240 aaKnown RBP7.49□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms