RNA–Protein interactions for RNA: ENST00000639054.1

PAX6-250, Transcript of paired box 6, humanhuman

TSL 5

Gene PAX6, Length 2,254 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAX6-250ENST00000639054 EVC2Q86UK5 1308 aa16.29■□□□□ 0.2
PAX6-250ENST00000639054 FAM135BQ49AJ0 1406 aa16.28■□□□□ 0.2
PAX6-250ENST00000639054 CDCA8Q53HL2 280 aa16.28■□□□□ 0.2
PAX6-250ENST00000639054 SIRT1Q96EB6 747 aa16.28■□□□□ 0.2
PAX6-250ENST00000639054 CHD2O14647 1828 aaKnown RBP16.28■□□□□ 0.2
PAX6-250ENST00000639054 STRCQ7RTU9 1775 aa16.28■□□□□ 0.2
PAX6-250ENST00000639054 XRN1Q8IZH2 1706 aaKnown RBP16.28■□□□□ 0.2
PAX6-250ENST00000639054 CDK19Q9BWU1 502 aa16.27■□□□□ 0.2
PAX6-250ENST00000639054 PANK3Q9H999 370 aa16.27■□□□□ 0.2
PAX6-250ENST00000639054 SIPA1L2Q9P2F8 1722 aaPredicted RBP16.27■□□□□ 0.19
PAX6-250ENST00000639054 SLC24A1O60721 1099 aa16.26■□□□□ 0.19
PAX6-250ENST00000639054 SRPK2P78362 688 aaKnown RBP16.26■□□□□ 0.19
PAX6-250ENST00000639054 PIK3R4Q99570 1358 aa16.26■□□□□ 0.19
PAX6-250ENST00000639054 MYOM1P52179 1685 aa16.26■□□□□ 0.19
PAX6-250ENST00000639054 TMC1Q8TDI8 760 aa16.25■□□□□ 0.19
PAX6-250ENST00000639054 SLC12A5Q9H2X9 1139 aa16.24■□□□□ 0.19
PAX6-250ENST00000639054 PTCH1Q13635 1447 aa16.24■□□□□ 0.19
PAX6-250ENST00000639054 WASLO00401 505 aaPredicted RBP16.22■□□□□ 0.19
PAX6-250ENST00000639054 NUTM2FA1L443 756 aa16.22■□□□□ 0.19
PAX6-250ENST00000639054 PER1O15534 1290 aaPredicted RBP16.21■□□□□ 0.19
PAX6-250ENST00000639054 ANP32CO43423 234 aa16.21■□□□□ 0.19
PAX6-250ENST00000639054 STRCP1A6NGW2 1772 aa16.2■□□□□ 0.18
PAX6-250ENST00000639054 PUS7Q96PZ0 661 aaKnown RBP16.18■□□□□ 0.18
PAX6-250ENST00000639054 CARD14Q9BXL6 1004 aa16.18■□□□□ 0.18
PAX6-250ENST00000639054 CABP1Q9NZU7 370 aa16.17■□□□□ 0.18
PAX6-250ENST00000639054 PRR36Q9H6K5 1346 aa16.17■□□□□ 0.18
PAX6-250ENST00000639054 NWD1Q149M9 1564 aa16.17■□□□□ 0.18
PAX6-250ENST00000639054 PROSER2Q86WR7 435 aaPredicted RBP16.17■□□□□ 0.18
PAX6-250ENST00000639054 NUDT16Q96DE0 195 aaKnown RBP16.17■□□□□ 0.18
PAX6-250ENST00000639054 ADGRB2O60241 1585 aa16.16■□□□□ 0.18
PAX6-250ENST00000639054 PRKRIP1Q9H875 184 aaPredicted RBP16.16■□□□□ 0.18
PAX6-250ENST00000639054 ATAD2Q6PL18 1390 aa16.16■□□□□ 0.18
PAX6-250ENST00000639054 CC2D1BQ5T0F9 858 aaKnown RBP16.15■□□□□ 0.18
PAX6-250ENST00000639054 NALCNQ8IZF0 1738 aa16.15■□□□□ 0.18
PAX6-250ENST00000639054 ZNF335Q9H4Z2 1342 aaPredicted RBP16.15■□□□□ 0.18
PAX6-250ENST00000639054 C14orf37Q86TY3 774 aa16.14■□□□□ 0.17
PAX6-250ENST00000639054 KNSTRNQ9Y448 316 aa16.14■□□□□ 0.17
PAX6-250ENST00000639054 ATP7BP35670 1465 aa16.13■□□□□ 0.17
PAX6-250ENST00000639054 CD163L1Q9NR16 1453 aa16.12■□□□□ 0.17
PAX6-250ENST00000639054 PPIP5K1Q6PFW1 1433 aa16.12■□□□□ 0.17
PAX6-250ENST00000639054 A0A1W2PP64 1363 aa16.12■□□□□ 0.17
PAX6-250ENST00000639054 RGPD8O14715 1765 aaPredicted RBP16.12■□□□□ 0.17
PAX6-250ENST00000639054 CCDC61Q9Y6R9 512 aa16.11■□□□□ 0.17
PAX6-250ENST00000639054 USP32Q8NFA0 1604 aa16.11■□□□□ 0.17
PAX6-250ENST00000639054 NSD3Q9BZ95 1437 aa16.11■□□□□ 0.17
PAX6-250ENST00000639054 AMER1Q5JTC6 1135 aaPredicted RBP16.11■□□□□ 0.17
PAX6-250ENST00000639054 TMEM94Q12767 1356 aa16.1■□□□□ 0.17
PAX6-250ENST00000639054 ANKRD36BQ8N2N9 1353 aa16.1■□□□□ 0.17
PAX6-250ENST00000639054 CCDC184Q52MB2 194 aa16.1■□□□□ 0.17
PAX6-250ENST00000639054 ADGRL3Q9HAR2 1447 aa16.1■□□□□ 0.17
PAX6-250ENST00000639054 NKTRP30414 1462 aaKnown RBP16.1■□□□□ 0.17
PAX6-250ENST00000639054 PMFBP1Q8TBY8 1022 aa16.08■□□□□ 0.17
PAX6-250ENST00000639054 TERF2IPQ9NYB0 399 aa16.08■□□□□ 0.16
PAX6-250ENST00000639054 NINLQ9Y2I6 1382 aa16.08■□□□□ 0.16
PAX6-250ENST00000639054 FMN2Q9NZ56 1722 aa16.08■□□□□ 0.16
PAX6-250ENST00000639054 KTN1Q86UP2 1357 aaKnown RBP16.07■□□□□ 0.16
PAX6-250ENST00000639054 DMRT2Q9Y5R5 561 aa16.07■□□□□ 0.16
PAX6-250ENST00000639054 HDGFL2Q7Z4V5 671 aaPredicted RBP16.07■□□□□ 0.16
PAX6-250ENST00000639054 TOPAZ1Q8N9V7 1692 aa16.06■□□□□ 0.16
PAX6-250ENST00000639054 CDC42BPGQ6DT37 1551 aa16.06■□□□□ 0.16
PAX6-250ENST00000639054 AEBP2Q6ZN18 517 aaPredicted RBP16.06■□□□□ 0.16
PAX6-250ENST00000639054 ACEP12821 1306 aa16.05■□□□□ 0.16
PAX6-250ENST00000639054 XIRP1Q702N8 1843 aaKnown RBP16.05■□□□□ 0.16
PAX6-250ENST00000639054 CPSF1Q10570 1443 aaKnown RBP16.05■□□□□ 0.16
PAX6-250ENST00000639054 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.05■□□□□ 0.16
PAX6-250ENST00000639054 C19orf44Q9H6X5 657 aa16.05■□□□□ 0.16
PAX6-250ENST00000639054 PARD3Q8TEW0 1356 aa16.04■□□□□ 0.16
PAX6-250ENST00000639054 PLEKHG3A1L390 1219 aa16.04■□□□□ 0.16
PAX6-250ENST00000639054 LRRC7Q96NW7 1537 aa16.04■□□□□ 0.16
PAX6-250ENST00000639054 CCER2I3L3R5 266 aa16.03■□□□□ 0.16
PAX6-250ENST00000639054 RALBP1Q15311 655 aa16.03■□□□□ 0.16
PAX6-250ENST00000639054 GGNBP2Q9H3C7 697 aa16.02■□□□□ 0.16
PAX6-250ENST00000639054 ESCO1Q5FWF5 840 aa16.02■□□□□ 0.15
PAX6-250ENST00000639054 ORAI2Q96SN7 254 aa16.02■□□□□ 0.15
PAX6-250ENST00000639054 CGNL1Q0VF96 1302 aa16.02■□□□□ 0.15
PAX6-250ENST00000639054 ANKARQ7Z5J8 1434 aa16.02■□□□□ 0.15
PAX6-250ENST00000639054 ITSN1Q15811 1721 aa16.01■□□□□ 0.15
PAX6-250ENST00000639054 AKAP12Q02952 1782 aa16.01■□□□□ 0.15
PAX6-250ENST00000639054 TNNT2P45379 298 aaPredicted RBP16.01■□□□□ 0.15
PAX6-250ENST00000639054 NGDNQ8NEJ9 315 aaKnown RBP16.01■□□□□ 0.15
PAX6-250ENST00000639054 FYB1O15117 783 aa16.01■□□□□ 0.15
PAX6-250ENST00000639054 YTHDC1Q96MU7 727 aaKnown RBP16.01■□□□□ 0.15
PAX6-250ENST00000639054 ZRANB1Q9UGI0 708 aa16.01■□□□□ 0.15
PAX6-250ENST00000639054 NPC1L1Q9UHC9 1359 aa16■□□□□ 0.15
PAX6-250ENST00000639054 MYBBP1AQ9BQG0 1328 aaKnown RBP16■□□□□ 0.15
PAX6-250ENST00000639054 ATF3P18847 181 aa16■□□□□ 0.15
PAX6-250ENST00000639054 MRS2Q9HD23 443 aa15.99■□□□□ 0.15
PAX6-250ENST00000639054 PHF8Q9UPP1 1060 aa15.99■□□□□ 0.15
PAX6-250ENST00000639054 MON2Q7Z3U7 1717 aa15.99■□□□□ 0.15
PAX6-250ENST00000639054 NME9Q86XW9 330 aa15.99■□□□□ 0.15
PAX6-250ENST00000639054 MORC1Q86VD1 984 aa15.98■□□□□ 0.15
PAX6-250ENST00000639054 ZNF692Q9BU19 519 aaPredicted RBP15.98■□□□□ 0.15
PAX6-250ENST00000639054 NCOA3Q9Y6Q9 1424 aa15.98■□□□□ 0.15
PAX6-250ENST00000639054 PPP2R1AP30153 589 aa15.98■□□□□ 0.15
PAX6-250ENST00000639054 EDC4Q6P2E9 1401 aaKnown RBP15.98■□□□□ 0.15
PAX6-250ENST00000639054 POLR3AO14802 1390 aaPredicted RBP15.98■□□□□ 0.15
PAX6-250ENST00000639054 MSH6P52701 1360 aa15.98■□□□□ 0.15
PAX6-250ENST00000639054 C1orf167Q5SNV9 1468 aa15.97■□□□□ 0.15
PAX6-250ENST00000639054 USP6P35125 1406 aa15.97■□□□□ 0.15
PAX6-250ENST00000639054 MST1RQ04912 1400 aa15.97■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms