RNA–Protein interactions for RNA: ENST00000639004.1

FAM49B-230, Transcript of family with sequence similarity 49 member B, humanhuman

TSL 5 BASIC

Gene FAM49B, Length 837 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM49B-230ENST00000639004 NUTM2DQ5VT03 806 aaPredicted RBP12.47□□□□□ -0.41
FAM49B-230ENST00000639004 NUTM2AQ8IVF1 878 aaPredicted RBP12.47□□□□□ -0.41
FAM49B-230ENST00000639004 KCTD12Q96CX2 325 aaKnown RBP12.47□□□□□ -0.41
FAM49B-230ENST00000639004 WBP1LQ9NX94 342 aa12.47□□□□□ -0.41
FAM49B-230ENST00000639004 TMEM259Q4ZIN3 620 aa12.46□□□□□ -0.41
FAM49B-230ENST00000639004 MTMR2Q13614 643 aa12.45□□□□□ -0.42
FAM49B-230ENST00000639004 BANK1Q8NDB2 785 aa12.45□□□□□ -0.42
FAM49B-230ENST00000639004 SLC27A5Q9Y2P5 690 aa12.44□□□□□ -0.42
FAM49B-230ENST00000639004 C6orf229H3BNL8 230 aa12.43□□□□□ -0.42
FAM49B-230ENST00000639004 ZMYND15Q9H091 742 aa12.43□□□□□ -0.42
FAM49B-230ENST00000639004 SPDYE5A6NIY4 337 aa12.42□□□□□ -0.42
FAM49B-230ENST00000639004 SYMPKQ92797 1274 aaKnown RBP12.42□□□□□ -0.42
FAM49B-230ENST00000639004 SNRKQ9NRH2 765 aa12.42□□□□□ -0.42
FAM49B-230ENST00000639004 PCDHB3Q9Y5E6 796 aa12.42□□□□□ -0.42
FAM49B-230ENST00000639004 AP1G2O75843 785 aa12.41□□□□□ -0.42
FAM49B-230ENST00000639004 Q3C1V9 767 aa12.39□□□□□ -0.43
FAM49B-230ENST00000639004 CFAP99D6REC4 459 aa12.38□□□□□ -0.43
FAM49B-230ENST00000639004 UBTFP17480 764 aaKnown RBP12.38□□□□□ -0.43
FAM49B-230ENST00000639004 BLOC1S3Q6QNY0 202 aa12.38□□□□□ -0.43
FAM49B-230ENST00000639004 USP17L8P0C7I0 530 aa12.37□□□□□ -0.43
FAM49B-230ENST00000639004 RNF19BQ6ZMZ0 732 aa12.37□□□□□ -0.43
FAM49B-230ENST00000639004 RETREG3Q86VR2 466 aa12.36□□□□□ -0.43
FAM49B-230ENST00000639004 SCUBE3Q8IX30 993 aa12.36□□□□□ -0.43
FAM49B-230ENST00000639004 MTMR14Q8NCE2 650 aa12.36□□□□□ -0.43
FAM49B-230ENST00000639004 CLUAP1Q96AJ1 413 aa12.36□□□□□ -0.43
FAM49B-230ENST00000639004 NR1I2O75469 434 aa12.35□□□□□ -0.43
FAM49B-230ENST00000639004 PTPN5P54829 565 aa12.35□□□□□ -0.43
FAM49B-230ENST00000639004 BRICD5Q6PL45 260 aa12.35□□□□□ -0.43
FAM49B-230ENST00000639004 NYAP1Q6ZVC0 841 aa12.35□□□□□ -0.43
FAM49B-230ENST00000639004 PRR7Q8TB68 274 aa12.35□□□□□ -0.43
FAM49B-230ENST00000639004 MYT1LQ9UL68 1186 aa12.35□□□□□ -0.43
FAM49B-230ENST00000639004 SALL2Q9Y467 1007 aaPredicted RBP12.35□□□□□ -0.43
FAM49B-230ENST00000639004 CTDSPL2Q05D32 466 aa12.34□□□□□ -0.43
FAM49B-230ENST00000639004 HELBQ8NG08 1087 aaPredicted RBP12.34□□□□□ -0.43
FAM49B-230ENST00000639004 TSC1Q92574 1164 aa12.34□□□□□ -0.43
FAM49B-230ENST00000639004 THAP11Q96EK4 314 aa12.34□□□□□ -0.43
FAM49B-230ENST00000639004 POM121Q96HA1 1249 aa12.33□□□□□ -0.44
FAM49B-230ENST00000639004 A6NJR5 290 aa12.32□□□□□ -0.44
FAM49B-230ENST00000639004 SOCS7O14512 581 aa12.32□□□□□ -0.44
FAM49B-230ENST00000639004 COPS2P61201 443 aa12.32□□□□□ -0.44
FAM49B-230ENST00000639004 FMNL1O95466 1100 aaPredicted RBP12.31□□□□□ -0.44
FAM49B-230ENST00000639004 USB1Q9BQ65 265 aaKnown RBP12.31□□□□□ -0.44
FAM49B-230ENST00000639004 SUPT5HO00267 1087 aaKnown RBP12.3□□□□□ -0.44
FAM49B-230ENST00000639004 COG6Q9Y2V7 657 aa12.3□□□□□ -0.44
FAM49B-230ENST00000639004 DESI1Q6ICB0 168 aa12.28□□□□□ -0.44
FAM49B-230ENST00000639004 LRRN4Q8WUT4 740 aa12.28□□□□□ -0.44
FAM49B-230ENST00000639004 GJD4Q96KN9 370 aaPredicted RBP12.28□□□□□ -0.44
FAM49B-230ENST00000639004 HMX1Q9NP08 348 aaPredicted RBP12.28□□□□□ -0.44
FAM49B-230ENST00000639004 RAD21O60216 631 aa12.27□□□□□ -0.45
FAM49B-230ENST00000639004 MTRQ99707 1265 aa12.27□□□□□ -0.45
FAM49B-230ENST00000639004 APBB1O00213 710 aa12.26□□□□□ -0.45
FAM49B-230ENST00000639004 PER1O15534 1290 aaPredicted RBP12.26□□□□□ -0.45
FAM49B-230ENST00000639004 SPSB2Q99619 263 aa12.25□□□□□ -0.45
FAM49B-230ENST00000639004 TLL1O43897 1013 aa12.24□□□□□ -0.45
FAM49B-230ENST00000639004 ZPR1O75312 459 aa12.24□□□□□ -0.45
FAM49B-230ENST00000639004 TJAP1Q5JTD0 557 aa12.24□□□□□ -0.45
FAM49B-230ENST00000639004 PROSER2Q86WR7 435 aaPredicted RBP12.24□□□□□ -0.45
FAM49B-230ENST00000639004 TRIM34Q9BYJ4 488 aa12.24□□□□□ -0.45
FAM49B-230ENST00000639004 GDPD2Q9HCC8 539 aa12.24□□□□□ -0.45
FAM49B-230ENST00000639004 TRAK2O60296 914 aa12.23□□□□□ -0.45
FAM49B-230ENST00000639004 MSS51Q4VC12 460 aa12.23□□□□□ -0.45
FAM49B-230ENST00000639004 LYPD8Q6UX82 237 aa12.23□□□□□ -0.45
FAM49B-230ENST00000639004 FNBP4Q8N3X1 1017 aaPredicted RBP12.23□□□□□ -0.45
FAM49B-230ENST00000639004 FAM160A2Q8N612 972 aaPredicted RBP12.23□□□□□ -0.45
FAM49B-230ENST00000639004 TBC1D2BQ9UPU7 963 aa12.23□□□□□ -0.45
FAM49B-230ENST00000639004 JUNDP17535 347 aa12.22□□□□□ -0.45
FAM49B-230ENST00000639004 RNF166Q96A37 237 aaPredicted RBP12.22□□□□□ -0.45
FAM49B-230ENST00000639004 IL21Q9HBE4 155 aa12.22□□□□□ -0.45
FAM49B-230ENST00000639004 ZNF516Q92618 1163 aa12.21□□□□□ -0.45
FAM49B-230ENST00000639004 ADH1BP00325 375 aa12.2□□□□□ -0.46
FAM49B-230ENST00000639004 EPS8L1Q8TE68 723 aa12.2□□□□□ -0.46
FAM49B-230ENST00000639004 PRM3Q9NNZ6 103 aa12.2□□□□□ -0.46
FAM49B-230ENST00000639004 NDUFB9Q9Y6M9 179 aa12.2□□□□□ -0.46
FAM49B-230ENST00000639004 PRDM9Q9NQV7 894 aa12.19□□□□□ -0.46
FAM49B-230ENST00000639004 DXOO77932 396 aaKnown RBP12.18□□□□□ -0.46
FAM49B-230ENST00000639004 ABL2P42684 1182 aa12.18□□□□□ -0.46
FAM49B-230ENST00000639004 GPR37L1O60883 481 aa12.17□□□□□ -0.46
FAM49B-230ENST00000639004 MMP16P51512 607 aa12.17□□□□□ -0.46
FAM49B-230ENST00000639004 NR6A1Q15406 480 aa12.17□□□□□ -0.46
FAM49B-230ENST00000639004 PTPRNQ16849 979 aa12.17□□□□□ -0.46
FAM49B-230ENST00000639004 HCSTQ9UBK5 93 aa12.17□□□□□ -0.46
FAM49B-230ENST00000639004 F12P00748 615 aaPredicted RBP12.16□□□□□ -0.46
FAM49B-230ENST00000639004 C1orf115Q9H7X2 142 aa12.15□□□□□ -0.46
FAM49B-230ENST00000639004 ARID3CA6NKF2 412 aa12.14□□□□□ -0.47
FAM49B-230ENST00000639004 IRF5Q13568 498 aa12.14□□□□□ -0.47
FAM49B-230ENST00000639004 NKX2-3Q8TAU0 364 aa12.13□□□□□ -0.47
FAM49B-230ENST00000639004 NUDT12Q9BQG2 462 aa12.12□□□□□ -0.47
FAM49B-230ENST00000639004 SLC6A16Q9GZN6 736 aa12.12□□□□□ -0.47
FAM49B-230ENST00000639004 MAP10Q9P2G4 905 aa12.12□□□□□ -0.47
FAM49B-230ENST00000639004 ZNF330Q9Y3S2 320 aaPredicted RBP12.12□□□□□ -0.47
FAM49B-230ENST00000639004 CCNYL3P0C7X3 344 aa12.11□□□□□ -0.47
FAM49B-230ENST00000639004 WWC1Q8IX03 1113 aa12.11□□□□□ -0.47
FAM49B-230ENST00000639004 ZNF777Q9ULD5 760 aaPredicted RBP12.11□□□□□ -0.47
FAM49B-230ENST00000639004 ITGBL1O95965 494 aaPredicted RBP12.09□□□□□ -0.47
FAM49B-230ENST00000639004 EVA1BQ9NVM1 165 aa12.09□□□□□ -0.47
FAM49B-230ENST00000639004 CTHP32929 405 aa12.08□□□□□ -0.48
FAM49B-230ENST00000639004 S1PR4O95977 384 aa12.07□□□□□ -0.48
FAM49B-230ENST00000639004 KCNC4Q03721 635 aa12.07□□□□□ -0.48
FAM49B-230ENST00000639004 KCNH2Q12809 1159 aa12.07□□□□□ -0.48
FAM49B-230ENST00000639004 PNMA1Q8ND90 353 aa12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms