RNA–Protein interactions for RNA: ENST00000638888.1

STRADA-233, Transcript of STE20-related kinase adaptor alpha, human

TSL 5 BASIC

Gene STRADA, Length 1,718 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
STRADA-233	ENST00000638888	YEATS2	Q9ULM3	1422 aa		11.27	□□□□□ -0.61
STRADA-233	ENST00000638888	RERE	Q9P2R6	1566 aa		11.27	□□□□□ -0.61
STRADA-233	ENST00000638888	CRBN	Q96SW2	442 aa		11.26	□□□□□ -0.61
STRADA-233	ENST00000638888	TRAK1	Q9UPV9	953 aa		11.26	□□□□□ -0.61
STRADA-233	ENST00000638888	CLTC	Q00610	1675 aa	Known RBP	11.26	□□□□□ -0.61
STRADA-233	ENST00000638888	NKTR	P30414	1462 aa	Known RBP	11.26	□□□□□ -0.61
STRADA-233	ENST00000638888	VGF	O15240	615 aa	Predicted RBP	11.26	□□□□□ -0.61
STRADA-233	ENST00000638888	PLIN1	O60240	522 aa		11.26	□□□□□ -0.61
STRADA-233	ENST00000638888	MS4A1	P11836	297 aa		11.26	□□□□□ -0.61
STRADA-233	ENST00000638888	NSD2	O96028	1365 aa		11.25	□□□□□ -0.61
STRADA-233	ENST00000638888	IQSEC2	Q5JU85	1478 aa		11.25	□□□□□ -0.61
STRADA-233	ENST00000638888	SLC52A1	Q9NWF4	448 aa		11.25	□□□□□ -0.61
STRADA-233	ENST00000638888	ANKRD36B	Q8N2N9	1353 aa		11.25	□□□□□ -0.61
STRADA-233	ENST00000638888	DEK	P35659	375 aa	Known RBP	11.24	□□□□□ -0.61
STRADA-233	ENST00000638888	TMEM132E	Q6IEE7	984 aa		11.24	□□□□□ -0.61
STRADA-233	ENST00000638888	ANKRD26	Q9UPS8	1709 aa		11.24	□□□□□ -0.61
STRADA-233	ENST00000638888	APAF1	O14727	1248 aa		11.23	□□□□□ -0.61
STRADA-233	ENST00000638888	SLC12A5	Q9H2X9	1139 aa		11.23	□□□□□ -0.61
STRADA-233	ENST00000638888	NINL	Q9Y2I6	1382 aa		11.23	□□□□□ -0.61
STRADA-233	ENST00000638888	KDM2B	Q8NHM5	1336 aa		11.23	□□□□□ -0.61
STRADA-233	ENST00000638888	AGL	P35573	1532 aa		11.23	□□□□□ -0.61
STRADA-233	ENST00000638888		E9PSI1	815 aa		11.23	□□□□□ -0.61
STRADA-233	ENST00000638888	IDI1	Q13907	227 aa		11.23	□□□□□ -0.61
STRADA-233	ENST00000638888	C20orf194	Q5TEA3	1177 aa		11.23	□□□□□ -0.61
STRADA-233	ENST00000638888	CCDC146	Q8IYE0	955 aa		11.23	□□□□□ -0.61
STRADA-233	ENST00000638888	NOP58	Q9Y2X3	529 aa	Known RBP	11.23	□□□□□ -0.61
STRADA-233	ENST00000638888	PTPRM	P28827	1452 aa		11.23	□□□□□ -0.61
STRADA-233	ENST00000638888	EVC2	Q86UK5	1308 aa		11.22	□□□□□ -0.61
STRADA-233	ENST00000638888	NCBP3	Q53F19	620 aa	Known RBP	11.22	□□□□□ -0.61
STRADA-233	ENST00000638888	GOLGA6L2	Q8N9W4	650 aa	Predicted RBP	11.22	□□□□□ -0.61
STRADA-233	ENST00000638888	FBXO41	Q8TF61	875 aa		11.22	□□□□□ -0.61
STRADA-233	ENST00000638888	SPINK5	Q9NQ38	1064 aa	Predicted RBP	11.22	□□□□□ -0.61
STRADA-233	ENST00000638888	MORC1	Q86VD1	984 aa		11.21	□□□□□ -0.61
STRADA-233	ENST00000638888	PHF23	Q9BUL5	403 aa	Predicted RBP	11.21	□□□□□ -0.61
STRADA-233	ENST00000638888	CGNL1	Q0VF96	1302 aa		11.21	□□□□□ -0.62
STRADA-233	ENST00000638888	ADGRB2	O60241	1585 aa		11.21	□□□□□ -0.62
STRADA-233	ENST00000638888	ANP32A	P39687	249 aa	Known RBP	11.21	□□□□□ -0.62
STRADA-233	ENST00000638888	IPO9	Q96P70	1041 aa	Known RBP	11.21	□□□□□ -0.62
STRADA-233	ENST00000638888	BACH2	Q9BYV9	841 aa		11.21	□□□□□ -0.62
STRADA-233	ENST00000638888	MED14	O60244	1454 aa		11.19	□□□□□ -0.62
STRADA-233	ENST00000638888	PDE4A	P27815	886 aa		11.19	□□□□□ -0.62
STRADA-233	ENST00000638888	ABCC11	Q96J66	1382 aa		11.19	□□□□□ -0.62
STRADA-233	ENST00000638888	SETD1A	O15047	1707 aa	Known RBP	11.18	□□□□□ -0.62
STRADA-233	ENST00000638888	CENPQ	Q7L2Z9	268 aa	Predicted RBP	11.18	□□□□□ -0.62
STRADA-233	ENST00000638888	WWC1	Q8IX03	1113 aa		11.18	□□□□□ -0.62
STRADA-233	ENST00000638888	RUNDC1	Q96C34	613 aa		11.18	□□□□□ -0.62
STRADA-233	ENST00000638888	ALK	Q9UM73	1620 aa		11.18	□□□□□ -0.62
STRADA-233	ENST00000638888	SPATA31D1	Q6ZQQ2	1576 aa		11.18	□□□□□ -0.62
STRADA-233	ENST00000638888	CCDC27	Q2M243	656 aa		11.18	□□□□□ -0.62
STRADA-233	ENST00000638888	PPP6R1	Q9UPN7	881 aa		11.18	□□□□□ -0.62
STRADA-233	ENST00000638888	DMRT2	Q9Y5R5	561 aa		11.18	□□□□□ -0.62
STRADA-233	ENST00000638888	DLC1	Q96QB1	1528 aa		11.17	□□□□□ -0.62
STRADA-233	ENST00000638888	YTHDC2	Q9H6S0	1430 aa	Known RBP	11.17	□□□□□ -0.62
STRADA-233	ENST00000638888	NLRP1	Q9C000	1473 aa		11.17	□□□□□ -0.62
STRADA-233	ENST00000638888	CD163L1	Q9NR16	1453 aa		11.17	□□□□□ -0.62
STRADA-233	ENST00000638888	ATAD2	Q6PL18	1390 aa		11.16	□□□□□ -0.62
STRADA-233	ENST00000638888	COL3A1	P02461	1466 aa	Predicted RBP	11.16	□□□□□ -0.62
STRADA-233	ENST00000638888	NUTM2D	Q5VT03	806 aa	Predicted RBP	11.16	□□□□□ -0.62
STRADA-233	ENST00000638888		A0A1W2PP64	1363 aa		11.16	□□□□□ -0.62
STRADA-233	ENST00000638888	KIF20B	Q96Q89	1820 aa		11.15	□□□□□ -0.62
STRADA-233	ENST00000638888	PAK3	O75914	559 aa	Predicted RBP	11.15	□□□□□ -0.62
STRADA-233	ENST00000638888	MTHFS	P49914	203 aa		11.15	□□□□□ -0.62
STRADA-233	ENST00000638888	PDE3A	Q14432	1141 aa		11.15	□□□□□ -0.62
STRADA-233	ENST00000638888	WDR63	Q8IWG1	891 aa		11.15	□□□□□ -0.62
STRADA-233	ENST00000638888	LMTK3	Q96Q04	1460 aa		11.15	□□□□□ -0.62
STRADA-233	ENST00000638888	ARHGEF40	Q8TER5	1519 aa		11.15	□□□□□ -0.62
STRADA-233	ENST00000638888	CFAP53	Q96M91	514 aa		11.15	□□□□□ -0.63
STRADA-233	ENST00000638888	CABP2	Q9NPB3	220 aa		11.15	□□□□□ -0.63
STRADA-233	ENST00000638888	BCAR3	O75815	825 aa		11.14	□□□□□ -0.63
STRADA-233	ENST00000638888	VIRMA	Q69YN4	1812 aa	Known RBP	11.14	□□□□□ -0.63
STRADA-233	ENST00000638888	TCP11L2	Q8N4U5	519 aa		11.13	□□□□□ -0.63
STRADA-233	ENST00000638888	A2ML1	A8K2U0	1454 aa		11.13	□□□□□ -0.63
STRADA-233	ENST00000638888	CDC42BPG	Q6DT37	1551 aa		11.12	□□□□□ -0.63
STRADA-233	ENST00000638888	FBXO31	Q5XUX0	539 aa	Predicted RBP	11.12	□□□□□ -0.63
STRADA-233	ENST00000638888	ZBTB47	Q9UFB7	747 aa	Predicted RBP	11.12	□□□□□ -0.63
STRADA-233	ENST00000638888	NRXN3	Q9Y4C0	1643 aa		11.11	□□□□□ -0.63
STRADA-233	ENST00000638888	TNNT2	P45379	298 aa	Predicted RBP	11.11	□□□□□ -0.63
STRADA-233	ENST00000638888	KNDC1	Q76NI1	1749 aa		11.11	□□□□□ -0.63
STRADA-233	ENST00000638888	AAMP	Q13685	434 aa		11.1	□□□□□ -0.63
STRADA-233	ENST00000638888	PRAM1	Q96QH2	718 aa		11.1	□□□□□ -0.63
STRADA-233	ENST00000638888	ATP7B	P35670	1465 aa		11.1	□□□□□ -0.63
STRADA-233	ENST00000638888	PNPLA6	Q8IY17	1366 aa		11.1	□□□□□ -0.63
STRADA-233	ENST00000638888	RARS	P54136	660 aa	Known RBP	11.09	□□□□□ -0.63
STRADA-233	ENST00000638888	SKAP1	Q86WV1	359 aa		11.09	□□□□□ -0.63
STRADA-233	ENST00000638888	TERF2IP	Q9NYB0	399 aa		11.09	□□□□□ -0.63
STRADA-233	ENST00000638888	STK26	Q9P289	416 aa		11.09	□□□□□ -0.63
STRADA-233	ENST00000638888	FYB1	O15117	783 aa		11.09	□□□□□ -0.63
STRADA-233	ENST00000638888	PRKCSH	P14314	528 aa	Predicted RBP	11.09	□□□□□ -0.63
STRADA-233	ENST00000638888	SRPK2	P78362	688 aa	Known RBP	11.09	□□□□□ -0.63
STRADA-233	ENST00000638888	PLEKHF1	Q96S99	279 aa		11.09	□□□□□ -0.63
STRADA-233	ENST00000638888	RIMS2	Q9UQ26	1411 aa		11.08	□□□□□ -0.64
STRADA-233	ENST00000638888	SAFB2	Q14151	953 aa	Known RBP eCLIP	11.08	□□□□□ -0.64
STRADA-233	ENST00000638888	C8orf34	Q49A92	452 aa		11.08	□□□□□ -0.64
STRADA-233	ENST00000638888	RRP7A	Q9Y3A4	280 aa	Known RBP	11.08	□□□□□ -0.64
STRADA-233	ENST00000638888	MINK1	Q8N4C8	1332 aa	Predicted RBP	11.07	□□□□□ -0.64
STRADA-233	ENST00000638888	CT47B1	P0C2W7	299 aa	Predicted RBP	11.07	□□□□□ -0.64
STRADA-233	ENST00000638888	FAM161A	Q3B820	660 aa		11.07	□□□□□ -0.64
STRADA-233	ENST00000638888	POGK	Q9P215	609 aa		11.07	□□□□□ -0.64
STRADA-233	ENST00000638888	U2AF1L5	P0DN76	240 aa	Predicted RBP	11.06	□□□□□ -0.64
STRADA-233	ENST00000638888	U2AF1	Q01081	240 aa	Known RBP eCLIP	11.06	□□□□□ -0.64

Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms