RNA–Protein interactions for RNA: ENST00000638605.1

ALK-206, Transcript of ALK receptor tyrosine kinase, humanhuman

TSL 1 (best)

Gene ALK, Length 1,757 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ALK-206ENST00000638605 NCKAP5LQ9HCH0 1330 aa17.13■□□□□ 0.33
ALK-206ENST00000638605 CABP2Q9NPB3 220 aa17.13■□□□□ 0.33
ALK-206ENST00000638605 ROBO2Q9HCK4 1378 aa17.13■□□□□ 0.33
ALK-206ENST00000638605 TMC1Q8TDI8 760 aa17.12■□□□□ 0.33
ALK-206ENST00000638605 AMOTL2Q9Y2J4 779 aa17.12■□□□□ 0.33
ALK-206ENST00000638605 FAM135BQ49AJ0 1406 aa17.12■□□□□ 0.33
ALK-206ENST00000638605 PRKRIP1Q9H875 184 aaPredicted RBP17.12■□□□□ 0.33
ALK-206ENST00000638605 NPHP4O75161 1426 aaPredicted RBP17.12■□□□□ 0.33
ALK-206ENST00000638605 HSPA2P54652 639 aa17.1■□□□□ 0.33
ALK-206ENST00000638605 SIRT1Q96EB6 747 aa17.1■□□□□ 0.33
ALK-206ENST00000638605 YTHDC1Q96MU7 727 aaKnown RBP17.09■□□□□ 0.33
ALK-206ENST00000638605 CDK19Q9BWU1 502 aa17.09■□□□□ 0.33
ALK-206ENST00000638605 PER1O15534 1290 aaPredicted RBP17.08■□□□□ 0.33
ALK-206ENST00000638605 SLC12A5Q9H2X9 1139 aa17.08■□□□□ 0.33
ALK-206ENST00000638605 KNSTRNQ9Y448 316 aa17.07■□□□□ 0.32
ALK-206ENST00000638605 PIK3R4Q99570 1358 aa17.07■□□□□ 0.32
ALK-206ENST00000638605 XRN1Q8IZH2 1706 aaKnown RBP17.07■□□□□ 0.32
ALK-206ENST00000638605 CCER2I3L3R5 266 aa17.07■□□□□ 0.32
ALK-206ENST00000638605 PUS7Q96PZ0 661 aaKnown RBP17.07■□□□□ 0.32
ALK-206ENST00000638605 PTCH1Q13635 1447 aa17.06■□□□□ 0.32
ALK-206ENST00000638605 KCNA6P17658 529 aa17.06■□□□□ 0.32
ALK-206ENST00000638605 CC2D1BQ5T0F9 858 aaKnown RBP17.06■□□□□ 0.32
ALK-206ENST00000638605 ATAD2Q6PL18 1390 aa17.05■□□□□ 0.32
ALK-206ENST00000638605 KTN1Q86UP2 1357 aaKnown RBP17.05■□□□□ 0.32
ALK-206ENST00000638605 WASLO00401 505 aaPredicted RBP17.05■□□□□ 0.32
ALK-206ENST00000638605 LMTK3Q96Q04 1460 aa17.04■□□□□ 0.32
ALK-206ENST00000638605 SIPA1L2Q9P2F8 1722 aaPredicted RBP17.04■□□□□ 0.32
ALK-206ENST00000638605 CHD2O14647 1828 aaKnown RBP17.03■□□□□ 0.32
ALK-206ENST00000638605 CARD14Q9BXL6 1004 aa17.02■□□□□ 0.31
ALK-206ENST00000638605 NINLQ9Y2I6 1382 aa17■□□□□ 0.31
ALK-206ENST00000638605 ADGRB2O60241 1585 aa17■□□□□ 0.31
ALK-206ENST00000638605 RALBP1Q15311 655 aa17■□□□□ 0.31
ALK-206ENST00000638605 NSD3Q9BZ95 1437 aa17■□□□□ 0.31
ALK-206ENST00000638605 CABP1Q9NZU7 370 aa17■□□□□ 0.31
ALK-206ENST00000638605 ANKRD36BQ8N2N9 1353 aa16.99■□□□□ 0.31
ALK-206ENST00000638605 NUTM2FA1L443 756 aa16.99■□□□□ 0.31
ALK-206ENST00000638605 CCDC184Q52MB2 194 aa16.99■□□□□ 0.31
ALK-206ENST00000638605 AMER1Q5JTC6 1135 aaPredicted RBP16.99■□□□□ 0.31
ALK-206ENST00000638605 MRS2Q9HD23 443 aa16.99■□□□□ 0.31
ALK-206ENST00000638605 PARD3Q8TEW0 1356 aa16.98■□□□□ 0.31
ALK-206ENST00000638605 RBM33Q96EV2 1170 aaKnown RBP16.98■□□□□ 0.31
ALK-206ENST00000638605 A0A1W2PP64 1363 aa16.98■□□□□ 0.31
ALK-206ENST00000638605 NUDT16Q96DE0 195 aaKnown RBP16.97■□□□□ 0.31
ALK-206ENST00000638605 TERF2IPQ9NYB0 399 aa16.97■□□□□ 0.31
ALK-206ENST00000638605 MYBBP1AQ9BQG0 1328 aaKnown RBP16.97■□□□□ 0.31
ALK-206ENST00000638605 PPIP5K1Q6PFW1 1433 aa16.96■□□□□ 0.31
ALK-206ENST00000638605 HDGFL2Q7Z4V5 671 aaPredicted RBP16.95■□□□□ 0.3
ALK-206ENST00000638605 ATP7BP35670 1465 aa16.95■□□□□ 0.3
ALK-206ENST00000638605 PRR36Q9H6K5 1346 aa16.95■□□□□ 0.3
ALK-206ENST00000638605 CCDC61Q9Y6R9 512 aa16.94■□□□□ 0.3
ALK-206ENST00000638605 NWD1Q149M9 1564 aa16.94■□□□□ 0.3
ALK-206ENST00000638605 CD163L1Q9NR16 1453 aa16.94■□□□□ 0.3
ALK-206ENST00000638605 C14orf37Q86TY3 774 aa16.94■□□□□ 0.3
ALK-206ENST00000638605 STRCQ7RTU9 1775 aa16.93■□□□□ 0.3
ALK-206ENST00000638605 NPC1L1Q9UHC9 1359 aa16.93■□□□□ 0.3
ALK-206ENST00000638605 NALCNQ8IZF0 1738 aa16.93■□□□□ 0.3
ALK-206ENST00000638605 CGNL1Q0VF96 1302 aa16.93■□□□□ 0.3
ALK-206ENST00000638605 NLRP13Q86W25 1043 aa16.91■□□□□ 0.3
ALK-206ENST00000638605 PROSER2Q86WR7 435 aaPredicted RBP16.91■□□□□ 0.3
ALK-206ENST00000638605 USP32Q8NFA0 1604 aa16.91■□□□□ 0.3
ALK-206ENST00000638605 FAM9BQ8IZU0 186 aa16.9■□□□□ 0.3
ALK-206ENST00000638605 CDC42BPGQ6DT37 1551 aa16.89■□□□□ 0.29
ALK-206ENST00000638605 BRD4O60885 1362 aaPredicted RBP16.89■□□□□ 0.29
ALK-206ENST00000638605 ADGRL3Q9HAR2 1447 aa16.89■□□□□ 0.29
ALK-206ENST00000638605 TOPAZ1Q8N9V7 1692 aa16.89■□□□□ 0.29
ALK-206ENST00000638605 NKTRP30414 1462 aaKnown RBP16.89■□□□□ 0.29
ALK-206ENST00000638605 ITSN1Q15811 1721 aa16.88■□□□□ 0.29
ALK-206ENST00000638605 MORC1Q86VD1 984 aa16.88■□□□□ 0.29
ALK-206ENST00000638605 FMN2Q9NZ56 1722 aa16.88■□□□□ 0.29
ALK-206ENST00000638605 RGPD8O14715 1765 aaPredicted RBP16.88■□□□□ 0.29
ALK-206ENST00000638605 PPP2R1AP30153 589 aa16.87■□□□□ 0.29
ALK-206ENST00000638605 TNNT2P45379 298 aaPredicted RBP16.87■□□□□ 0.29
ALK-206ENST00000638605 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.87■□□□□ 0.29
ALK-206ENST00000638605 STRCP1A6NGW2 1772 aa16.87■□□□□ 0.29
ALK-206ENST00000638605 CPSF1Q10570 1443 aaKnown RBP16.87■□□□□ 0.29
ALK-206ENST00000638605 PMFBP1Q8TBY8 1022 aa16.86■□□□□ 0.29
ALK-206ENST00000638605 GGNBP2Q9H3C7 697 aa16.86■□□□□ 0.29
ALK-206ENST00000638605 NSD2O96028 1365 aa16.86■□□□□ 0.29
ALK-206ENST00000638605 ACEP12821 1306 aa16.85■□□□□ 0.29
ALK-206ENST00000638605 AKAP12Q02952 1782 aa16.85■□□□□ 0.29
ALK-206ENST00000638605 ANKARQ7Z5J8 1434 aa16.85■□□□□ 0.29
ALK-206ENST00000638605 EDC4Q6P2E9 1401 aaKnown RBP16.84■□□□□ 0.29
ALK-206ENST00000638605 PLEKHG3A1L390 1219 aa16.84■□□□□ 0.29
ALK-206ENST00000638605 CENPBP07199 599 aaPredicted RBP16.84■□□□□ 0.29
ALK-206ENST00000638605 KIF20BQ96Q89 1820 aa16.84■□□□□ 0.29
ALK-206ENST00000638605 MON2Q7Z3U7 1717 aa16.84■□□□□ 0.29
ALK-206ENST00000638605 TMEM94Q12767 1356 aa16.83■□□□□ 0.29
ALK-206ENST00000638605 FYB1O15117 783 aa16.83■□□□□ 0.28
ALK-206ENST00000638605 NGDNQ8NEJ9 315 aaKnown RBP16.83■□□□□ 0.28
ALK-206ENST00000638605 ZNF692Q9BU19 519 aaPredicted RBP16.83■□□□□ 0.28
ALK-206ENST00000638605 ZNF335Q9H4Z2 1342 aaPredicted RBP16.81■□□□□ 0.28
ALK-206ENST00000638605 PNISRQ8TF01 805 aaKnown RBP16.81■□□□□ 0.28
ALK-206ENST00000638605 NME9Q86XW9 330 aa16.8■□□□□ 0.28
ALK-206ENST00000638605 ANKRD26Q9UPS8 1709 aa16.8■□□□□ 0.28
ALK-206ENST00000638605 HNRNPUQ00839 825 aaKnown RBP eCLIP16.79■□□□□ 0.28
ALK-206ENST00000638605 C19orf44Q9H6X5 657 aa16.79■□□□□ 0.28
ALK-206ENST00000638605 USP6P35125 1406 aa16.79■□□□□ 0.28
ALK-206ENST00000638605 ESCO1Q5FWF5 840 aa16.79■□□□□ 0.28
ALK-206ENST00000638605 DMRT2Q9Y5R5 561 aa16.78■□□□□ 0.28
ALK-206ENST00000638605 POLR3AO14802 1390 aaPredicted RBP16.78■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms