RNA–Protein interactions for RNA: ENST00000638141.1

CAPN3-221, Transcript of calpain 3, humanhuman

TSL 5

Gene CAPN3, Length 2,358 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-221ENST00000638141 TROQ12816 1431 aaPredicted RBP15.1■□□□□ 0.01
CAPN3-221ENST00000638141 CANXP27824 592 aaKnown RBP15.1■□□□□ 0.01
CAPN3-221ENST00000638141 TNNT2P45379 298 aaPredicted RBP15.1■□□□□ 0.01
CAPN3-221ENST00000638141 GBP4Q96PP9 640 aa15.1■□□□□ 0.01
CAPN3-221ENST00000638141 PIK3C2GO75747 1445 aa15.1■□□□□ 0.01
CAPN3-221ENST00000638141 STAC3Q96MF2 364 aa15.1■□□□□ 0.01
CAPN3-221ENST00000638141 NASPP49321 788 aaPredicted RBP15.09■□□□□ 0.01
CAPN3-221ENST00000638141 CLUAP1Q96AJ1 413 aa15.09■□□□□ 0.01
CAPN3-221ENST00000638141 R3HCC1Q9Y3T6 440 aaKnown RBP15.09■□□□□ 0.01
CAPN3-221ENST00000638141 ANKRD50Q9ULJ7 1429 aa15.08■□□□□ 0.01
CAPN3-221ENST00000638141 LETM1O95202 739 aaPredicted RBP15.08■□□□□ 0
CAPN3-221ENST00000638141 PMFBP1Q8TBY8 1022 aa15.08■□□□□ 0
CAPN3-221ENST00000638141 ZHX1Q9UKY1 873 aaPredicted RBP15.08■□□□□ 0
CAPN3-221ENST00000638141 TAF3Q5VWG9 929 aa15.07■□□□□ 0
CAPN3-221ENST00000638141 WDR43Q15061 677 aaKnown RBP eCLIP15.07■□□□□ 0
CAPN3-221ENST00000638141 SASS6Q6UVJ0 657 aa15.07■□□□□ 0
CAPN3-221ENST00000638141 BCL11BQ9C0K0 894 aaPredicted RBP15.07■□□□□ 0
CAPN3-221ENST00000638141 SMC5Q8IY18 1101 aa15.06■□□□□ 0
CAPN3-221ENST00000638141 PDLIM2Q96JY6 352 aa15.06■□□□□ 0
CAPN3-221ENST00000638141 TAOK2Q9UL54 1235 aa15.06■□□□□ 0
CAPN3-221ENST00000638141 ADAMTS8Q9UP79 889 aa15.06■□□□□ 0
CAPN3-221ENST00000638141 SNX21Q969T3 373 aa15.06■□□□□ 0
CAPN3-221ENST00000638141 ERBINQ96RT1 1412 aa15.06■□□□□ 0
CAPN3-221ENST00000638141 TSPOAP1O95153 1857 aa15.05■□□□□ 0
CAPN3-221ENST00000638141 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP15.05■□□□□ 0
CAPN3-221ENST00000638141 PPP4R3BQ5MIZ7 849 aa15.05■□□□□ 0
CAPN3-221ENST00000638141 CLEC17AQ6ZS10 378 aa15.05■□□□□ 0
CAPN3-221ENST00000638141 IPO4Q8TEX9 1081 aaKnown RBP15.05■□□□□ 0
CAPN3-221ENST00000638141 GLI2P10070 1586 aa15.05■□□□□ -0
CAPN3-221ENST00000638141 NPC1L1Q9UHC9 1359 aa15.05■□□□□ -0
CAPN3-221ENST00000638141 E9PSI1 815 aa15.05■□□□□ -0
CAPN3-221ENST00000638141 RAB3GAP1Q15042 981 aa15.05■□□□□ -0
CAPN3-221ENST00000638141 HSCBQ8IWL3 235 aa15.05■□□□□ -0
CAPN3-221ENST00000638141 TAF7LQ5H9L4 462 aa15.04■□□□□ -0
CAPN3-221ENST00000638141 NAP1L2Q9ULW6 460 aaPredicted RBP15.04■□□□□ -0
CAPN3-221ENST00000638141 TTC37Q6PGP7 1564 aa15.04■□□□□ -0
CAPN3-221ENST00000638141 C22orf23Q9BZE7 217 aa15.04■□□□□ -0
CAPN3-221ENST00000638141 TNPO1Q92973 898 aaKnown RBP15.03■□□□□ -0
CAPN3-221ENST00000638141 ABCA9Q8IUA7 1624 aa15.03■□□□□ -0
CAPN3-221ENST00000638141 ZNF445P59923 1031 aa15.03■□□□□ -0
CAPN3-221ENST00000638141 SYNMO15061 1565 aa15.02■□□□□ -0
CAPN3-221ENST00000638141 ZKSCAN5Q9Y2L8 839 aa15.02■□□□□ -0
CAPN3-221ENST00000638141 RNF17Q9BXT8 1623 aaKnown RBP15.02■□□□□ -0
CAPN3-221ENST00000638141 MAP3K4Q9Y6R4 1608 aa15.02■□□□□ -0
CAPN3-221ENST00000638141 CD109Q6YHK3 1445 aa15.02■□□□□ -0
CAPN3-221ENST00000638141 EIF2AK3Q9NZJ5 1116 aaKnown RBP15.02□□□□□ -0.01
CAPN3-221ENST00000638141 KLHL40Q2TBA0 621 aa15.01□□□□□ -0.01
CAPN3-221ENST00000638141 CC2D1BQ5T0F9 858 aaKnown RBP15.01□□□□□ -0.01
CAPN3-221ENST00000638141 TMF1P82094 1093 aa15□□□□□ -0.01
CAPN3-221ENST00000638141 TESK2Q96S53 571 aa15□□□□□ -0.01
CAPN3-221ENST00000638141 PANK3Q9H999 370 aa15□□□□□ -0.01
CAPN3-221ENST00000638141 DISP3Q9P2K9 1392 aa15□□□□□ -0.01
CAPN3-221ENST00000638141 CCDC141Q6ZP82 1450 aa15□□□□□ -0.01
CAPN3-221ENST00000638141 RBM25P49756 843 aaKnown RBP15□□□□□ -0.01
CAPN3-221ENST00000638141 NUP155O75694 1391 aa15□□□□□ -0.01
CAPN3-221ENST00000638141 ZNF644Q9H582 1327 aaPredicted RBP15□□□□□ -0.01
CAPN3-221ENST00000638141 GPATCH8Q9UKJ3 1502 aaKnown RBP15□□□□□ -0.01
CAPN3-221ENST00000638141 PPP2R1AP30153 589 aa14.99□□□□□ -0.01
CAPN3-221ENST00000638141 HSP90AB1P08238 724 aaKnown RBP14.99□□□□□ -0.01
CAPN3-221ENST00000638141 PRDM10Q9NQV6 1147 aa14.99□□□□□ -0.01
CAPN3-221ENST00000638141 FAM135AQ9P2D6 1515 aa14.99□□□□□ -0.01
CAPN3-221ENST00000638141 SPRYD3Q8NCJ5 442 aa14.98□□□□□ -0.01
CAPN3-221ENST00000638141 TMEM51Q9NW97 253 aa14.98□□□□□ -0.01
CAPN3-221ENST00000638141 ASXL1Q8IXJ9 1541 aa14.98□□□□□ -0.01
CAPN3-221ENST00000638141 PPRC1Q5VV67 1664 aaKnown RBP14.98□□□□□ -0.01
CAPN3-221ENST00000638141 GOLGA6L22H0YM25 854 aa14.97□□□□□ -0.01
CAPN3-221ENST00000638141 GTF2F1P35269 517 aaKnown RBP eCLIP14.97□□□□□ -0.01
CAPN3-221ENST00000638141 CDC42BPAQ5VT25 1732 aa14.97□□□□□ -0.01
CAPN3-221ENST00000638141 MYRIPQ8NFW9 859 aa14.97□□□□□ -0.01
CAPN3-221ENST00000638141 PDZRN3Q9UPQ7 1066 aa14.97□□□□□ -0.01
CAPN3-221ENST00000638141 MYO5CQ9NQX4 1742 aa14.96□□□□□ -0.01
CAPN3-221ENST00000638141 BCAR3O75815 825 aa14.96□□□□□ -0.02
CAPN3-221ENST00000638141 XPCQ01831 940 aaPredicted RBP14.95□□□□□ -0.02
CAPN3-221ENST00000638141 PRIMPOLQ96LW4 560 aa14.95□□□□□ -0.02
CAPN3-221ENST00000638141 RWDD1Q9H446 243 aaPredicted RBP14.95□□□□□ -0.02
CAPN3-221ENST00000638141 CFDP1Q9UEE9 299 aaPredicted RBP14.95□□□□□ -0.02
CAPN3-221ENST00000638141 PLCH2O75038 1416 aa14.95□□□□□ -0.02
CAPN3-221ENST00000638141 CDC42BPBQ9Y5S2 1711 aa14.95□□□□□ -0.02
CAPN3-221ENST00000638141 ARHGEF5Q12774 1597 aa14.94□□□□□ -0.02
CAPN3-221ENST00000638141 CCDC39Q9UFE4 941 aa14.94□□□□□ -0.02
CAPN3-221ENST00000638141 C9orf84Q5VXU9 1444 aa14.94□□□□□ -0.02
CAPN3-221ENST00000638141 KDM2AQ9Y2K7 1162 aa14.93□□□□□ -0.02
CAPN3-221ENST00000638141 A2MP01023 1474 aa14.93□□□□□ -0.02
CAPN3-221ENST00000638141 MAGI2Q86UL8 1455 aa14.93□□□□□ -0.02
CAPN3-221ENST00000638141 VGFO15240 615 aaPredicted RBP14.92□□□□□ -0.02
CAPN3-221ENST00000638141 HMGN5P82970 282 aaKnown RBP14.92□□□□□ -0.02
CAPN3-221ENST00000638141 CDCA8Q53HL2 280 aa14.92□□□□□ -0.02
CAPN3-221ENST00000638141 ZNF777Q9ULD5 760 aaPredicted RBP14.92□□□□□ -0.02
CAPN3-221ENST00000638141 KNSTRNQ9Y448 316 aa14.92□□□□□ -0.02
CAPN3-221ENST00000638141 ARHGAP5Q13017 1502 aa14.92□□□□□ -0.02
CAPN3-221ENST00000638141 PREX2Q70Z35 1606 aa14.92□□□□□ -0.02
CAPN3-221ENST00000638141 IQGAP1P46940 1657 aa14.92□□□□□ -0.02
CAPN3-221ENST00000638141 FANCAO15360 1455 aa14.91□□□□□ -0.02
CAPN3-221ENST00000638141 EFCAB2Q5VUJ9 269 aa14.9□□□□□ -0.02
CAPN3-221ENST00000638141 COG6Q9Y2V7 657 aa14.9□□□□□ -0.02
CAPN3-221ENST00000638141 UNC13BO14795 1591 aa14.9□□□□□ -0.02
CAPN3-221ENST00000638141 RSPH4AQ5TD94 716 aa14.89□□□□□ -0.03
CAPN3-221ENST00000638141 CHMP4BQ9H444 224 aaKnown RBP14.89□□□□□ -0.03
CAPN3-221ENST00000638141 PCDHB15Q9Y5E8 787 aa14.89□□□□□ -0.03
CAPN3-221ENST00000638141 ATP10AO60312 1499 aa14.89□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms