RNA–Protein interactions for RNA: ENST00000637911.1

SYNGAP1-225, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5

Gene SYNGAP1, Length 157 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-225ENST00000637911 MICALL1Q8N3F8 863 aa0.43□□□□□ -2.34
SYNGAP1-225ENST00000637911 SNIP1Q8TAD8 396 aaKnown RBP0.43□□□□□ -2.34
SYNGAP1-225ENST00000637911 HPS1Q92902 700 aa0.43□□□□□ -2.34
SYNGAP1-225ENST00000637911 ZFP42Q96MM3 310 aa0.43□□□□□ -2.34
SYNGAP1-225ENST00000637911 BCL2L12Q9HB09 334 aa0.43□□□□□ -2.34
SYNGAP1-225ENST00000637911 MKL2Q9ULH7 1088 aa0.43□□□□□ -2.34
SYNGAP1-225ENST00000637911 OAS3Q9Y6K5 1087 aaKnown RBP0.43□□□□□ -2.34
SYNGAP1-225ENST00000637911 NOTCH2Q04721 2471 aa0.43□□□□□ -2.34
SYNGAP1-225ENST00000637911 SALL3Q9BXA9 1300 aa0.42□□□□□ -2.34
SYNGAP1-225ENST00000637911 C2orf72A6NCS6 295 aa0.42□□□□□ -2.34
SYNGAP1-225ENST00000637911 SOBPA7XYQ1 873 aa0.42□□□□□ -2.34
SYNGAP1-225ENST00000637911 KRTAP29-1A8MX34 341 aaPredicted RBP0.42□□□□□ -2.34
SYNGAP1-225ENST00000637911 PIK3R2O00459 728 aa0.42□□□□□ -2.34
SYNGAP1-225ENST00000637911 TGM1P22735 817 aa0.42□□□□□ -2.34
SYNGAP1-225ENST00000637911 COL8A1P27658 744 aa0.42□□□□□ -2.34
SYNGAP1-225ENST00000637911 CHRNA4P43681 627 aa0.42□□□□□ -2.34
SYNGAP1-225ENST00000637911 ERFEQ4G0M1 354 aa0.42□□□□□ -2.34
SYNGAP1-225ENST00000637911 LCE1EQ5T753 118 aa0.42□□□□□ -2.34
SYNGAP1-225ENST00000637911 VWCEQ96DN2 955 aa0.42□□□□□ -2.34
SYNGAP1-225ENST00000637911 FAM212AQ96EL1 285 aa0.42□□□□□ -2.34
SYNGAP1-225ENST00000637911 ASIC4Q96FT7 647 aa0.42□□□□□ -2.34
SYNGAP1-225ENST00000637911 MENTQ9BUN1 341 aa0.42□□□□□ -2.34
SYNGAP1-225ENST00000637911 BRIP1Q9BX63 1249 aa0.42□□□□□ -2.34
SYNGAP1-225ENST00000637911 RRAGCQ9HB90 399 aa0.42□□□□□ -2.34
SYNGAP1-225ENST00000637911 RAPGEFL1Q9UHV5 662 aa0.42□□□□□ -2.34
SYNGAP1-225ENST00000637911 J3QL48 77 aa0.41□□□□□ -2.34
SYNGAP1-225ENST00000637911 CAPN5O15484 640 aaPredicted RBP0.41□□□□□ -2.34
SYNGAP1-225ENST00000637911 ZPR1O75312 459 aa0.41□□□□□ -2.34
SYNGAP1-225ENST00000637911 BCRP11274 1271 aa0.41□□□□□ -2.34
SYNGAP1-225ENST00000637911 LMO1P25800 156 aa0.41□□□□□ -2.34
SYNGAP1-225ENST00000637911 RPIAP49247 311 aa0.41□□□□□ -2.34
SYNGAP1-225ENST00000637911 GP2P55259 537 aaKnown RBP0.41□□□□□ -2.34
SYNGAP1-225ENST00000637911 SRSF11Q05519 484 aaKnown RBP0.41□□□□□ -2.34
SYNGAP1-225ENST00000637911 CSRP2Q16527 193 aa0.41□□□□□ -2.34
SYNGAP1-225ENST00000637911 FAM98CQ17RN3 349 aaKnown RBP0.41□□□□□ -2.34
SYNGAP1-225ENST00000637911 ZNF648Q5T619 568 aaPredicted RBP0.41□□□□□ -2.34
SYNGAP1-225ENST00000637911 TTLL10Q6ZVT0 673 aa0.41□□□□□ -2.34
SYNGAP1-225ENST00000637911 RIC3Q7Z5B4 369 aa0.41□□□□□ -2.34
SYNGAP1-225ENST00000637911 ZNF454Q8N9F8 522 aa0.41□□□□□ -2.34
SYNGAP1-225ENST00000637911 ZSCAN18Q8TBC5 510 aaPredicted RBP0.41□□□□□ -2.34
SYNGAP1-225ENST00000637911 RELTQ969Z4 430 aa0.41□□□□□ -2.34
SYNGAP1-225ENST00000637911 ZNF764Q96H86 408 aaPredicted RBP0.41□□□□□ -2.34
SYNGAP1-225ENST00000637911 CABP2Q9NPB3 220 aa0.41□□□□□ -2.34
SYNGAP1-225ENST00000637911 TPSG1Q9NRR2 321 aa0.41□□□□□ -2.34
SYNGAP1-225ENST00000637911 RNF112Q9ULX5 631 aa0.41□□□□□ -2.34
SYNGAP1-225ENST00000637911 SENP3-EIF4A1A0A087X0R7 540 aa0.4□□□□□ -2.35
SYNGAP1-225ENST00000637911 CDC14CA4D256 554 aa0.4□□□□□ -2.35
SYNGAP1-225ENST00000637911 AKAP8O43823 692 aaKnown RBP0.4□□□□□ -2.35
SYNGAP1-225ENST00000637911 TBC1D12O60347 775 aa0.4□□□□□ -2.35
SYNGAP1-225ENST00000637911 S1PR4O95977 384 aa0.4□□□□□ -2.35
SYNGAP1-225ENST00000637911 PYGBP11216 843 aa0.4□□□□□ -2.35
SYNGAP1-225ENST00000637911 SSTR4P31391 388 aa0.4□□□□□ -2.35
SYNGAP1-225ENST00000637911 PSEN1P49768 467 aa0.4□□□□□ -2.35
SYNGAP1-225ENST00000637911 HMGA2P52926 109 aa0.4□□□□□ -2.35
SYNGAP1-225ENST00000637911 ZXDCQ2QGD7 858 aaPredicted RBP0.4□□□□□ -2.35
SYNGAP1-225ENST00000637911 SH3RF1Q7Z6J0 888 aa0.4□□□□□ -2.35
SYNGAP1-225ENST00000637911 ZNF467Q7Z7K2 595 aaPredicted RBP0.4□□□□□ -2.35
SYNGAP1-225ENST00000637911 KSR1Q8IVT5 923 aa0.4□□□□□ -2.35
SYNGAP1-225ENST00000637911 MYRFLQ96LU7 910 aa0.4□□□□□ -2.35
SYNGAP1-225ENST00000637911 SLC4A9Q96Q91 983 aa0.4□□□□□ -2.35
SYNGAP1-225ENST00000637911 KIAA1468Q9P260 1216 aa0.4□□□□□ -2.35
SYNGAP1-225ENST00000637911 SRRDQ9UH36 339 aa0.4□□□□□ -2.35
SYNGAP1-225ENST00000637911 SEPT9Q9UHD8 586 aaPredicted RBP0.4□□□□□ -2.35
SYNGAP1-225ENST00000637911 OSBPP22059 807 aa0.39□□□□□ -2.35
SYNGAP1-225ENST00000637911 SNRPNP63162 240 aaKnown RBP0.39□□□□□ -2.35
SYNGAP1-225ENST00000637911 PROX2Q3B8N5 592 aa0.39□□□□□ -2.35
SYNGAP1-225ENST00000637911 NBPF20Q3BBV1 942 aa0.39□□□□□ -2.35
SYNGAP1-225ENST00000637911 NBPF10Q6P3W6 841 aaKnown RBP0.39□□□□□ -2.35
SYNGAP1-225ENST00000637911 SV2AQ7L0J3 742 aa0.39□□□□□ -2.35
SYNGAP1-225ENST00000637911 PRRT2Q7Z6L0 340 aaPredicted RBP0.39□□□□□ -2.35
SYNGAP1-225ENST00000637911 VWA5B2Q8N398 1253 aa0.39□□□□□ -2.35
SYNGAP1-225ENST00000637911 NANOS1Q8WY41 292 aaKnown RBP0.39□□□□□ -2.35
SYNGAP1-225ENST00000637911 TOX2Q96NM4 488 aa0.39□□□□□ -2.35
SYNGAP1-225ENST00000637911 SLC38A3Q99624 504 aa0.39□□□□□ -2.35
SYNGAP1-225ENST00000637911 SLITRK6Q9H5Y7 841 aa0.39□□□□□ -2.35
SYNGAP1-225ENST00000637911 NOP53Q9NZM5 478 aaKnown RBP0.39□□□□□ -2.35
SYNGAP1-225ENST00000637911 LMCD1Q9NZU5 365 aa0.39□□□□□ -2.35
SYNGAP1-225ENST00000637911 WNT7AO00755 349 aa0.38□□□□□ -2.35
SYNGAP1-225ENST00000637911 ZBTB24O43167 697 aaPredicted RBP0.38□□□□□ -2.35
SYNGAP1-225ENST00000637911 RNF40O75150 1001 aa0.38□□□□□ -2.35
SYNGAP1-225ENST00000637911 FARP2O94887 1054 aaPredicted RBP0.38□□□□□ -2.35
SYNGAP1-225ENST00000637911 INHBBP09529 407 aa0.38□□□□□ -2.35
SYNGAP1-225ENST00000637911 H2AFB1P0C5Y9 115 aa0.38□□□□□ -2.35
SYNGAP1-225ENST00000637911 H2AFB2P0C5Z0 115 aa0.38□□□□□ -2.35
SYNGAP1-225ENST00000637911 ZSCAN22P10073 491 aaPredicted RBP0.38□□□□□ -2.35
SYNGAP1-225ENST00000637911 CD97P48960 835 aa0.38□□□□□ -2.35
SYNGAP1-225ENST00000637911 CRB2Q5IJ48 1285 aa0.38□□□□□ -2.35
SYNGAP1-225ENST00000637911 PLA2G2CQ5R387 149 aa0.38□□□□□ -2.35
SYNGAP1-225ENST00000637911 SIAH1Q8IUQ4 282 aa0.38□□□□□ -2.35
SYNGAP1-225ENST00000637911 MIER1Q8N108 512 aa0.38□□□□□ -2.35
SYNGAP1-225ENST00000637911 DNAJC5GQ8N7S2 189 aa0.38□□□□□ -2.35
SYNGAP1-225ENST00000637911 TRERF1Q96PN7 1200 aa0.38□□□□□ -2.35
SYNGAP1-225ENST00000637911 PURBQ96QR8 312 aaKnown RBP0.38□□□□□ -2.35
SYNGAP1-225ENST00000637911 SUV39H2Q9H5I1 410 aa0.38□□□□□ -2.35
SYNGAP1-225ENST00000637911 TNFRSF18Q9Y5U5 241 aa0.38□□□□□ -2.35
SYNGAP1-225ENST00000637911 PPP1R3GB7ZBB8 358 aa0.37□□□□□ -2.35
SYNGAP1-225ENST00000637911 GNB5O14775 395 aa0.37□□□□□ -2.35
SYNGAP1-225ENST00000637911 FOXD2O60548 495 aaPredicted RBP0.37□□□□□ -2.35
SYNGAP1-225ENST00000637911 ADRB1P08588 477 aa0.37□□□□□ -2.35
SYNGAP1-225ENST00000637911 SYN1P17600 705 aa0.37□□□□□ -2.35
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms