RNA–Protein interactions for RNA: ENST00000637657.1

PCCA-215, Transcript of propionyl-CoA carboxylase subunit alpha, humanhuman

TSL 5

Gene PCCA, Length 2,118 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCCA-215ENST00000637657 GRIN2AQ12879 1464 aa16.34■□□□□ 0.21
PCCA-215ENST00000637657 MAGI2Q86UL8 1455 aa16.34■□□□□ 0.21
PCCA-215ENST00000637657 IQGAP1P46940 1657 aa16.33■□□□□ 0.21
PCCA-215ENST00000637657 ZNF445P59923 1031 aa16.33■□□□□ 0.21
PCCA-215ENST00000637657 FAM13BQ9NYF5 915 aa16.33■□□□□ 0.21
PCCA-215ENST00000637657 UQCRHLA0A096LP55 91 aa16.32■□□□□ 0.2
PCCA-215ENST00000637657 UQCRHP07919 91 aa16.32■□□□□ 0.2
PCCA-215ENST00000637657 DMTNQ08495 405 aa16.32■□□□□ 0.2
PCCA-215ENST00000637657 KIF20AO95235 890 aa16.31■□□□□ 0.2
PCCA-215ENST00000637657 SASS6Q6UVJ0 657 aa16.31■□□□□ 0.2
PCCA-215ENST00000637657 CCDC94Q9BW85 323 aaPredicted RBP16.31■□□□□ 0.2
PCCA-215ENST00000637657 KCNA4P22459 653 aa16.31■□□□□ 0.2
PCCA-215ENST00000637657 PDLIM2Q96JY6 352 aa16.31■□□□□ 0.2
PCCA-215ENST00000637657 GTPBP4Q9BZE4 634 aaKnown RBP16.31■□□□□ 0.2
PCCA-215ENST00000637657 KANK1Q14678 1352 aa16.31■□□□□ 0.2
PCCA-215ENST00000637657 UNC13BO14795 1591 aa16.31■□□□□ 0.2
PCCA-215ENST00000637657 KIF16BQ96L93 1317 aa16.3■□□□□ 0.2
PCCA-215ENST00000637657 HSP90AB1P08238 724 aaKnown RBP16.3■□□□□ 0.2
PCCA-215ENST00000637657 SPRYD3Q8NCJ5 442 aa16.3■□□□□ 0.2
PCCA-215ENST00000637657 R3HCC1Q9Y3T6 440 aaKnown RBP16.3■□□□□ 0.2
PCCA-215ENST00000637657 ATP10AO60312 1499 aa16.3■□□□□ 0.2
PCCA-215ENST00000637657 TARBP1Q13395 1621 aaKnown RBP16.3■□□□□ 0.2
PCCA-215ENST00000637657 APAF1O14727 1248 aa16.3■□□□□ 0.2
PCCA-215ENST00000637657 PANK1Q8TE04 598 aa16.3■□□□□ 0.2
PCCA-215ENST00000637657 MFAP1P55081 439 aaKnown RBP16.29■□□□□ 0.2
PCCA-215ENST00000637657 CT47B1P0C2W7 299 aaPredicted RBP16.28■□□□□ 0.2
PCCA-215ENST00000637657 STAC3Q96MF2 364 aa16.28■□□□□ 0.2
PCCA-215ENST00000637657 ZKSCAN5Q9Y2L8 839 aa16.28■□□□□ 0.2
PCCA-215ENST00000637657 REREQ9P2R6 1566 aa16.28■□□□□ 0.2
PCCA-215ENST00000637657 TAF3Q5VWG9 929 aa16.28■□□□□ 0.2
PCCA-215ENST00000637657 MYOM1P52179 1685 aa16.27■□□□□ 0.2
PCCA-215ENST00000637657 TSPY4P0CV99 314 aa16.27■□□□□ 0.2
PCCA-215ENST00000637657 TSPY10P0CW01 314 aa16.27■□□□□ 0.2
PCCA-215ENST00000637657 RARSP54136 660 aaKnown RBP16.27■□□□□ 0.2
PCCA-215ENST00000637657 HDAC1Q13547 482 aaPredicted RBP16.27■□□□□ 0.2
PCCA-215ENST00000637657 CCDC39Q9UFE4 941 aa16.27■□□□□ 0.2
PCCA-215ENST00000637657 PCDHB15Q9Y5E8 787 aa16.27■□□□□ 0.2
PCCA-215ENST00000637657 SPINK5Q9NQ38 1064 aaPredicted RBP16.27■□□□□ 0.19
PCCA-215ENST00000637657 KDM5AP29375 1690 aaKnown RBP16.26■□□□□ 0.19
PCCA-215ENST00000637657 NBPF1Q3BBV0 1214 aa16.26■□□□□ 0.19
PCCA-215ENST00000637657 AEBP2Q6ZN18 517 aaPredicted RBP16.26■□□□□ 0.19
PCCA-215ENST00000637657 LETM1O95202 739 aaPredicted RBP16.25■□□□□ 0.19
PCCA-215ENST00000637657 WDR63Q8IWG1 891 aa16.25■□□□□ 0.19
PCCA-215ENST00000637657 CFAP44Q96MT7 982 aa16.25■□□□□ 0.19
PCCA-215ENST00000637657 DISP1Q96F81 1524 aa16.25■□□□□ 0.19
PCCA-215ENST00000637657 POLR3AO14802 1390 aaPredicted RBP16.25■□□□□ 0.19
PCCA-215ENST00000637657 DDX49Q9Y6V7 483 aaKnown RBP16.25■□□□□ 0.19
PCCA-215ENST00000637657 HMGN5P82970 282 aaKnown RBP16.24■□□□□ 0.19
PCCA-215ENST00000637657 MVPQ14764 893 aaKnown RBP16.24■□□□□ 0.19
PCCA-215ENST00000637657 WWC1Q8IX03 1113 aa16.24■□□□□ 0.19
PCCA-215ENST00000637657 IQGAP3Q86VI3 1631 aa16.24■□□□□ 0.19
PCCA-215ENST00000637657 PRG4Q92954 1404 aaPredicted RBP16.24■□□□□ 0.19
PCCA-215ENST00000637657 YEATS2Q9ULM3 1422 aa16.23■□□□□ 0.19
PCCA-215ENST00000637657 A0A0U1RQG5 324 aaPredicted RBP16.23■□□□□ 0.19
PCCA-215ENST00000637657 PRIMPOLQ96LW4 560 aa16.23■□□□□ 0.19
PCCA-215ENST00000637657 K7ELQ4 463 aaPredicted RBP16.22■□□□□ 0.19
PCCA-215ENST00000637657 NUCB2P80303 420 aa16.22■□□□□ 0.19
PCCA-215ENST00000637657 RSPH4AQ5TD94 716 aa16.22■□□□□ 0.19
PCCA-215ENST00000637657 CCDC27Q2M243 656 aa16.22■□□□□ 0.19
PCCA-215ENST00000637657 SCAF11Q99590 1463 aaKnown RBP16.21■□□□□ 0.19
PCCA-215ENST00000637657 CCDC146Q8IYE0 955 aa16.21■□□□□ 0.18
PCCA-215ENST00000637657 TTC37Q6PGP7 1564 aa16.2■□□□□ 0.18
PCCA-215ENST00000637657 MAST1Q9Y2H9 1570 aa16.2■□□□□ 0.18
PCCA-215ENST00000637657 IQSEC2Q5JU85 1478 aa16.2■□□□□ 0.18
PCCA-215ENST00000637657 KIAA1210Q9ULL0 1709 aa16.2■□□□□ 0.18
PCCA-215ENST00000637657 MADDQ8WXG6 1647 aa16.19■□□□□ 0.18
PCCA-215ENST00000637657 DUOX2Q9NRD8 1548 aa16.19■□□□□ 0.18
PCCA-215ENST00000637657 ZSCAN20P17040 1043 aaPredicted RBP16.19■□□□□ 0.18
PCCA-215ENST00000637657 MYRIPQ8NFW9 859 aa16.19■□□□□ 0.18
PCCA-215ENST00000637657 PHF23Q9BUL5 403 aaPredicted RBP16.19■□□□□ 0.18
PCCA-215ENST00000637657 DDX19BQ9UMR2 479 aa16.19■□□□□ 0.18
PCCA-215ENST00000637657 CFAP74Q9C0B2 1584 aa16.18■□□□□ 0.18
PCCA-215ENST00000637657 GTF2F1P35269 517 aaKnown RBP eCLIP16.18■□□□□ 0.18
PCCA-215ENST00000637657 ZKSCAN2Q63HK3 967 aa16.18■□□□□ 0.18
PCCA-215ENST00000637657 ADGRL1O94910 1474 aa16.18■□□□□ 0.18
PCCA-215ENST00000637657 PLA2R1Q13018 1463 aa16.18■□□□□ 0.18
PCCA-215ENST00000637657 BAG4O95429 457 aaKnown RBP16.18■□□□□ 0.18
PCCA-215ENST00000637657 ZNF777Q9ULD5 760 aaPredicted RBP16.17■□□□□ 0.18
PCCA-215ENST00000637657 CEP152O94986 1710 aa16.17■□□□□ 0.18
PCCA-215ENST00000637657 BMP2KLQ5H9B9 411 aa16.16■□□□□ 0.18
PCCA-215ENST00000637657 FTSJ3Q8IY81 847 aaKnown RBP16.16■□□□□ 0.18
PCCA-215ENST00000637657 DZIP1LQ8IYY4 767 aaKnown RBP16.16■□□□□ 0.18
PCCA-215ENST00000637657 RUNDC1Q96C34 613 aa16.16■□□□□ 0.18
PCCA-215ENST00000637657 EIF2AK3Q9NZJ5 1116 aaKnown RBP16.16■□□□□ 0.18
PCCA-215ENST00000637657 PDS5BQ9NTI5 1447 aa16.16■□□□□ 0.18
PCCA-215ENST00000637657 SHPRHQ149N8 1683 aa16.16■□□□□ 0.18
PCCA-215ENST00000637657 PDE4CQ08493 712 aa16.16■□□□□ 0.18
PCCA-215ENST00000637657 KIAA2012Q0VF49 1180 aa16.16■□□□□ 0.18
PCCA-215ENST00000637657 ZSCAN23Q3MJ62 389 aa16.16■□□□□ 0.18
PCCA-215ENST00000637657 SPHKAPQ2M3C7 1700 aa16.16■□□□□ 0.18
PCCA-215ENST00000637657 XPCQ01831 940 aaPredicted RBP16.15■□□□□ 0.18
PCCA-215ENST00000637657 CWC22Q9HCG8 908 aaKnown RBP16.15■□□□□ 0.18
PCCA-215ENST00000637657 RLBP1P12271 317 aa16.15■□□□□ 0.18
PCCA-215ENST00000637657 IFT140Q96RY7 1462 aa16.14■□□□□ 0.17
PCCA-215ENST00000637657 CHMP4BQ9H444 224 aaKnown RBP16.13■□□□□ 0.17
PCCA-215ENST00000637657 ARID3CA6NKF2 412 aa16.13■□□□□ 0.17
PCCA-215ENST00000637657 LRSAM1Q6UWE0 723 aa16.12■□□□□ 0.17
PCCA-215ENST00000637657 ZHX1Q9UKY1 873 aaPredicted RBP16.12■□□□□ 0.17
PCCA-215ENST00000637657 RGL3Q3MIN7 710 aa16.12■□□□□ 0.17
PCCA-215ENST00000637657 KLHL34Q8N239 644 aa16.12■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms