RNA–Protein interactions for RNA: ENST00000637490.1

SYNGAP1-221, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5

Gene SYNGAP1, Length 132 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-221ENST00000637490 NFKBIBQ15653 356 aa3.16□□□□□ -1.9
SYNGAP1-221ENST00000637490 HSP90AB2PQ58FF8 381 aa3.16□□□□□ -1.9
SYNGAP1-221ENST00000637490 ZC3H12AQ5D1E8 599 aaKnown RBP3.16□□□□□ -1.9
SYNGAP1-221ENST00000637490 ZFYVE27Q5T4F4 411 aa3.16□□□□□ -1.9
SYNGAP1-221ENST00000637490 LRCH2Q5VUJ6 765 aa3.16□□□□□ -1.9
SYNGAP1-221ENST00000637490 DNAJC14Q6Y2X3 702 aaPredicted RBP3.16□□□□□ -1.9
SYNGAP1-221ENST00000637490 GET4Q7L5D6 327 aaPredicted RBP3.16□□□□□ -1.9
SYNGAP1-221ENST00000637490 PROCA1Q8NCQ7 364 aaPredicted RBP3.16□□□□□ -1.9
SYNGAP1-221ENST00000637490 CALR3Q96L12 384 aaKnown RBP3.16□□□□□ -1.9
SYNGAP1-221ENST00000637490 SLC26A8Q96RN1 970 aa3.16□□□□□ -1.9
SYNGAP1-221ENST00000637490 RANBP17Q9H2T7 1088 aaKnown RBP3.16□□□□□ -1.9
SYNGAP1-221ENST00000637490 KDM4CQ9H3R0 1056 aa3.16□□□□□ -1.9
SYNGAP1-221ENST00000637490 STK26Q9P289 416 aa3.16□□□□□ -1.9
SYNGAP1-221ENST00000637490 ZBED9Q6R2W3 1325 aa3.16□□□□□ -1.9
SYNGAP1-221ENST00000637490 PHLDB1Q86UU1 1377 aa3.15□□□□□ -1.9
SYNGAP1-221ENST00000637490 CCDC196A0A1B0GTZ2 297 aa3.15□□□□□ -1.91
SYNGAP1-221ENST00000637490 ANKRD62A6NC57 917 aa3.15□□□□□ -1.91
SYNGAP1-221ENST00000637490 RIOK3O14730 519 aaKnown RBP3.15□□□□□ -1.91
SYNGAP1-221ENST00000637490 CCP110O43303 1012 aa3.15□□□□□ -1.91
SYNGAP1-221ENST00000637490 EIF3JO75822 258 aaKnown RBP3.15□□□□□ -1.91
SYNGAP1-221ENST00000637490 TNNT3P45378 269 aaPredicted RBP3.15□□□□□ -1.91
SYNGAP1-221ENST00000637490 RIPK4P57078 832 aa3.15□□□□□ -1.91
SYNGAP1-221ENST00000637490 RHBDL3P58872 404 aa3.15□□□□□ -1.91
SYNGAP1-221ENST00000637490 KIAA2012Q0VF49 1180 aa3.15□□□□□ -1.91
SYNGAP1-221ENST00000637490 NEXNQ0ZGT2 675 aa3.15□□□□□ -1.91
SYNGAP1-221ENST00000637490 C11orf91Q3C1V1 193 aa3.15□□□□□ -1.91
SYNGAP1-221ENST00000637490 C1QTNF12Q5T7M4 302 aa3.15□□□□□ -1.91
SYNGAP1-221ENST00000637490 KLHL10Q6JEL2 608 aa3.15□□□□□ -1.91
SYNGAP1-221ENST00000637490 CLEC4GQ6UXB4 293 aa3.15□□□□□ -1.91
SYNGAP1-221ENST00000637490 PIAS4Q8N2W9 510 aaPredicted RBP3.15□□□□□ -1.91
SYNGAP1-221ENST00000637490 ATL2Q8NHH9 583 aa3.15□□□□□ -1.91
SYNGAP1-221ENST00000637490 SIRT1Q96EB6 747 aa3.15□□□□□ -1.91
SYNGAP1-221ENST00000637490 BORCS6Q96GS4 357 aa3.15□□□□□ -1.91
SYNGAP1-221ENST00000637490 TEX13AQ9BXU3 409 aaPredicted RBP3.15□□□□□ -1.91
SYNGAP1-221ENST00000637490 TMX4Q9H1E5 349 aaPredicted RBP3.15□□□□□ -1.91
SYNGAP1-221ENST00000637490 AMOTL2Q9Y2J4 779 aa3.15□□□□□ -1.91
SYNGAP1-221ENST00000637490 RPGRIP1LQ68CZ1 1315 aa3.15□□□□□ -1.91
SYNGAP1-221ENST00000637490 NISCHQ9Y2I1 1504 aa3.14□□□□□ -1.91
SYNGAP1-221ENST00000637490 GOLGA6L6A8MZA4 724 aa3.14□□□□□ -1.91
SYNGAP1-221ENST00000637490 GOLGA6L22H0YM25 854 aa3.14□□□□□ -1.91
SYNGAP1-221ENST00000637490 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP3.14□□□□□ -1.91
SYNGAP1-221ENST00000637490 SH3BP5O60239 455 aa3.14□□□□□ -1.91
SYNGAP1-221ENST00000637490 PPFIA4O75335 1185 aa3.14□□□□□ -1.91
SYNGAP1-221ENST00000637490 HSPA5P11021 654 aaKnown RBP3.14□□□□□ -1.91
SYNGAP1-221ENST00000637490 PAX7P23759 505 aa3.14□□□□□ -1.91
SYNGAP1-221ENST00000637490 GUCY2CP25092 1073 aa3.14□□□□□ -1.91
SYNGAP1-221ENST00000637490 ABCD1P33897 745 aa3.14□□□□□ -1.91
SYNGAP1-221ENST00000637490 HMGN5P82970 282 aaKnown RBP3.14□□□□□ -1.91
SYNGAP1-221ENST00000637490 SF3B2Q13435 895 aaKnown RBP3.14□□□□□ -1.91
SYNGAP1-221ENST00000637490 TBC1D10BQ4KMP7 808 aaPredicted RBP3.14□□□□□ -1.91
SYNGAP1-221ENST00000637490 ICE2Q659A1 982 aa3.14□□□□□ -1.91
SYNGAP1-221ENST00000637490 SMC5Q8IY18 1101 aa3.14□□□□□ -1.91
SYNGAP1-221ENST00000637490 OGFOD1Q8N543 542 aa3.14□□□□□ -1.91
SYNGAP1-221ENST00000637490 TMC1Q8TDI8 760 aa3.14□□□□□ -1.91
SYNGAP1-221ENST00000637490 CFAP53Q96M91 514 aa3.14□□□□□ -1.91
SYNGAP1-221ENST00000637490 METTL14Q9HCE5 456 aaKnown RBP3.14□□□□□ -1.91
SYNGAP1-221ENST00000637490 ARHGEF10LQ9HCE6 1279 aa3.14□□□□□ -1.91
SYNGAP1-221ENST00000637490 CWC25Q9NXE8 425 aaPredicted RBP3.14□□□□□ -1.91
SYNGAP1-221ENST00000637490 DDX49Q9Y6V7 483 aaKnown RBP3.14□□□□□ -1.91
SYNGAP1-221ENST00000637490 ANKRD18BA2A2Z9 1011 aa3.13□□□□□ -1.91
SYNGAP1-221ENST00000637490 ANKRD33BA6NCL7 494 aa3.13□□□□□ -1.91
SYNGAP1-221ENST00000637490 H0YHG0 523 aa3.13□□□□□ -1.91
SYNGAP1-221ENST00000637490 SMAPO00193 183 aa3.13□□□□□ -1.91
SYNGAP1-221ENST00000637490 PES1O00541 588 aaKnown RBP3.13□□□□□ -1.91
SYNGAP1-221ENST00000637490 NPM3O75607 178 aaKnown RBP3.13□□□□□ -1.91
SYNGAP1-221ENST00000637490 KIF4AO95239 1232 aa3.13□□□□□ -1.91
SYNGAP1-221ENST00000637490 CT47B1P0C2W7 299 aaPredicted RBP3.13□□□□□ -1.91
SYNGAP1-221ENST00000637490 CAPN2P17655 700 aa3.13□□□□□ -1.91
SYNGAP1-221ENST00000637490 CASQ1P31415 396 aa3.13□□□□□ -1.91
SYNGAP1-221ENST00000637490 MAGEA8P43361 318 aa3.13□□□□□ -1.91
SYNGAP1-221ENST00000637490 MRE11P49959 708 aa3.13□□□□□ -1.91
SYNGAP1-221ENST00000637490 NAP1L1P55209 391 aaKnown RBP3.13□□□□□ -1.91
SYNGAP1-221ENST00000637490 MAMSTRQ6ZN01 415 aa3.13□□□□□ -1.91
SYNGAP1-221ENST00000637490 EP400NLQ6ZTU2 488 aa3.13□□□□□ -1.91
SYNGAP1-221ENST00000637490 ZNF771Q7L3S4 317 aaPredicted RBP3.13□□□□□ -1.91
SYNGAP1-221ENST00000637490 CCDC91Q7Z6B0 441 aa3.13□□□□□ -1.91
SYNGAP1-221ENST00000637490 DZIP3Q86Y13 1208 aaKnown RBP3.13□□□□□ -1.91
SYNGAP1-221ENST00000637490 GOLGA6L1Q8N7Z2 621 aa3.13□□□□□ -1.91
SYNGAP1-221ENST00000637490 KLHL23Q8NBE8 558 aa3.13□□□□□ -1.91
SYNGAP1-221ENST00000637490 ACRBPQ8NEB7 543 aa3.13□□□□□ -1.91
SYNGAP1-221ENST00000637490 KCNV2Q8TDN2 545 aa3.13□□□□□ -1.91
SYNGAP1-221ENST00000637490 MICAL1Q8TDZ2 1067 aa3.13□□□□□ -1.91
SYNGAP1-221ENST00000637490 TBC1D22AQ8WUA7 517 aa3.13□□□□□ -1.91
SYNGAP1-221ENST00000637490 FBXW7Q969H0 707 aa3.13□□□□□ -1.91
SYNGAP1-221ENST00000637490 CHMP4CQ96CF2 233 aa3.13□□□□□ -1.91
SYNGAP1-221ENST00000637490 TACO1Q9BSH4 297 aaKnown RBP3.13□□□□□ -1.91
SYNGAP1-221ENST00000637490 MAF1Q9H063 256 aa3.13□□□□□ -1.91
SYNGAP1-221ENST00000637490 IRF2BPLQ9H1B7 796 aa3.13□□□□□ -1.91
SYNGAP1-221ENST00000637490 CHCHD3Q9NX63 227 aaKnown RBP3.13□□□□□ -1.91
SYNGAP1-221ENST00000637490 PNMA2Q9UL42 364 aa3.13□□□□□ -1.91
SYNGAP1-221ENST00000637490 PHF8Q9UPP1 1060 aa3.13□□□□□ -1.91
SYNGAP1-221ENST00000637490 COMMD10Q9Y6G5 202 aa3.13□□□□□ -1.91
SYNGAP1-221ENST00000637490 ERBB3P21860 1342 aa3.13□□□□□ -1.91
SYNGAP1-221ENST00000637490 IL16Q14005 1332 aa3.13□□□□□ -1.91
SYNGAP1-221ENST00000637490 NCAPD3P42695 1498 aa3.12□□□□□ -1.91
SYNGAP1-221ENST00000637490 UQCRHLA0A096LP55 91 aa3.12□□□□□ -1.91
SYNGAP1-221ENST00000637490 CCDC189A1A4V9 331 aa3.12□□□□□ -1.91
SYNGAP1-221ENST00000637490 FSD2A1L4K1 749 aa3.12□□□□□ -1.91
SYNGAP1-221ENST00000637490 CBFA2T2O43439 604 aa3.12□□□□□ -1.91
SYNGAP1-221ENST00000637490 CREB3O43889 395 aa3.12□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms