RNA–Protein interactions for RNA: ENST00000637475.1

CACNA1A-241, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

Gene CACNA1A, Length 1,975 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-241ENST00000637475 AGLP35573 1532 aa25.35■■□□□ 1.65
CACNA1A-241ENST00000637475 USP19O94966 1318 aa25.35■■□□□ 1.65
CACNA1A-241ENST00000637475 RTN4Q9NQC3 1192 aaKnown RBP25.34■■□□□ 1.65
CACNA1A-241ENST00000637475 SLC4A3P48751 1232 aa25.33■■□□□ 1.65
CACNA1A-241ENST00000637475 NLRP1Q9C000 1473 aa25.33■■□□□ 1.65
CACNA1A-241ENST00000637475 ATP7AQ04656 1500 aa25.32■■□□□ 1.64
CACNA1A-241ENST00000637475 TET3O43151 1660 aa25.32■■□□□ 1.64
CACNA1A-241ENST00000637475 CLTCL1P53675 1640 aa25.32■■□□□ 1.64
CACNA1A-241ENST00000637475 ILDR1Q86SU0 546 aaPredicted RBP25.31■■□□□ 1.64
CACNA1A-241ENST00000637475 MYO3AQ8NEV4 1616 aa25.31■■□□□ 1.64
CACNA1A-241ENST00000637475 INO80Q9ULG1 1556 aaPredicted RBP25.31■■□□□ 1.64
CACNA1A-241ENST00000637475 FAM43AQ8N2R8 423 aa25.3■■□□□ 1.64
CACNA1A-241ENST00000637475 RTEL1-TNFRSF6BF6WH68 1400 aa25.29■■□□□ 1.64
CACNA1A-241ENST00000637475 FRAT2O75474 233 aaPredicted RBP25.29■■□□□ 1.64
CACNA1A-241ENST00000637475 MYOM2P54296 1465 aa25.28■■□□□ 1.64
CACNA1A-241ENST00000637475 VWDEQ8N2E2 1590 aa25.28■■□□□ 1.64
CACNA1A-241ENST00000637475 GRWD1Q9BQ67 446 aaKnown RBP eCLIP25.28■■□□□ 1.64
CACNA1A-241ENST00000637475 POLR3AO14802 1390 aaPredicted RBP25.27■■□□□ 1.64
CACNA1A-241ENST00000637475 ESF1Q9H501 851 aaKnown RBP25.26■■□□□ 1.63
CACNA1A-241ENST00000637475 SBNO2Q9Y2G9 1366 aa25.25■■□□□ 1.63
CACNA1A-241ENST00000637475 C3P01024 1663 aa25.25■■□□□ 1.63
CACNA1A-241ENST00000637475 PREX1Q8TCU6 1659 aa25.24■■□□□ 1.63
CACNA1A-241ENST00000637475 RGS3P49796 1198 aa25.24■■□□□ 1.63
CACNA1A-241ENST00000637475 SPINK5Q9NQ38 1064 aaPredicted RBP25.24■■□□□ 1.63
CACNA1A-241ENST00000637475 BECN1Q14457 450 aa25.24■■□□□ 1.63
CACNA1A-241ENST00000637475 ERVK-7P63135 1459 aa25.23■■□□□ 1.63
CACNA1A-241ENST00000637475 SHPRHQ149N8 1683 aa25.22■■□□□ 1.63
CACNA1A-241ENST00000637475 CLUAP1Q96AJ1 413 aa25.22■■□□□ 1.63
CACNA1A-241ENST00000637475 APAF1O14727 1248 aa25.22■■□□□ 1.63
CACNA1A-241ENST00000637475 IGHDP01880 384 aa25.22■■□□□ 1.63
CACNA1A-241ENST00000637475 NCBP3Q53F19 620 aaKnown RBP25.21■■□□□ 1.63
CACNA1A-241ENST00000637475 IFT172Q9UG01 1749 aa25.21■■□□□ 1.63
CACNA1A-241ENST00000637475 BCAR3O75815 825 aa25.2■■□□□ 1.62
CACNA1A-241ENST00000637475 IQSEC2Q5JU85 1478 aa25.2■■□□□ 1.62
CACNA1A-241ENST00000637475 USP32Q8NFA0 1604 aa25.19■■□□□ 1.62
CACNA1A-241ENST00000637475 CENPJQ9HC77 1338 aaPredicted RBP25.18■■□□□ 1.62
CACNA1A-241ENST00000637475 KANK1Q14678 1352 aa25.17■■□□□ 1.62
CACNA1A-241ENST00000637475 RSPH6AQ9H0K4 717 aa25.16■■□□□ 1.62
CACNA1A-241ENST00000637475 NRXN1Q9ULB1 1477 aa25.16■■□□□ 1.62
CACNA1A-241ENST00000637475 PHF23Q9BUL5 403 aaPredicted RBP25.16■■□□□ 1.62
CACNA1A-241ENST00000637475 PMFBP1Q8TBY8 1022 aa25.15■■□□□ 1.62
CACNA1A-241ENST00000637475 ANTXR1Q9H6X2 564 aa25.15■■□□□ 1.62
CACNA1A-241ENST00000637475 GGT6Q6P531 493 aa25.14■■□□□ 1.62
CACNA1A-241ENST00000637475 CCDC146Q8IYE0 955 aa25.14■■□□□ 1.62
CACNA1A-241ENST00000637475 SETBP1Q9Y6X0 1596 aa25.14■■□□□ 1.61
CACNA1A-241ENST00000637475 SETD1BQ9UPS6 1966 aaKnown RBP25.13■■□□□ 1.61
CACNA1A-241ENST00000637475 L1TD1Q5T7N2 865 aaKnown RBP25.13■■□□□ 1.61
CACNA1A-241ENST00000637475 CLTCQ00610 1675 aaKnown RBP25.12■■□□□ 1.61
CACNA1A-241ENST00000637475 MROH2AA6NES4 1674 aa25.12■■□□□ 1.61
CACNA1A-241ENST00000637475 WWC1Q8IX03 1113 aa25.11■■□□□ 1.61
CACNA1A-241ENST00000637475 ZC3H13Q5T200 1668 aaKnown RBP25.1■■□□□ 1.61
CACNA1A-241ENST00000637475 TBC1D32Q96NH3 1257 aa25.1■■□□□ 1.61
CACNA1A-241ENST00000637475 DMRT2Q9Y5R5 561 aa25.09■■□□□ 1.61
CACNA1A-241ENST00000637475 KIF1BO60333 1816 aa25.08■■□□□ 1.6
CACNA1A-241ENST00000637475 CCDC27Q2M243 656 aa25.07■■□□□ 1.6
CACNA1A-241ENST00000637475 SEC24BO95487 1268 aa25.07■■□□□ 1.6
CACNA1A-241ENST00000637475 WDR63Q8IWG1 891 aa25.07■■□□□ 1.6
CACNA1A-241ENST00000637475 CARD14Q9BXL6 1004 aa25.07■■□□□ 1.6
CACNA1A-241ENST00000637475 UBE2Q2Q8WVN8 375 aa25.06■■□□□ 1.6
CACNA1A-241ENST00000637475 STRCQ7RTU9 1775 aa25.05■■□□□ 1.6
CACNA1A-241ENST00000637475 ZBTB4Q9P1Z0 1013 aaPredicted RBP25.05■■□□□ 1.6
CACNA1A-241ENST00000637475 RARSP54136 660 aaKnown RBP25.05■■□□□ 1.6
CACNA1A-241ENST00000637475 UPF2Q9HAU5 1272 aaKnown RBP25.05■■□□□ 1.6
CACNA1A-241ENST00000637475 MROH1Q8NDA8 1641 aa25.05■■□□□ 1.6
CACNA1A-241ENST00000637475 POGKQ9P215 609 aa25.04■■□□□ 1.6
CACNA1A-241ENST00000637475 COG6Q9Y2V7 657 aa25.04■■□□□ 1.6
CACNA1A-241ENST00000637475 KIF3BO15066 747 aa25.03■■□□□ 1.6
CACNA1A-241ENST00000637475 NPATQ14207 1427 aa25.03■■□□□ 1.6
CACNA1A-241ENST00000637475 ADGRB2O60241 1585 aa25.03■■□□□ 1.6
CACNA1A-241ENST00000637475 PANK1Q8TE04 598 aa25.02■■□□□ 1.6
CACNA1A-241ENST00000637475 RUNDC1Q96C34 613 aa25.02■■□□□ 1.6
CACNA1A-241ENST00000637475 FBXO41Q8TF61 875 aa25■■□□□ 1.59
CACNA1A-241ENST00000637475 EFCAB6Q5THR3 1501 aa25■■□□□ 1.59
CACNA1A-241ENST00000637475 CANXP27824 592 aaKnown RBP25■■□□□ 1.59
CACNA1A-241ENST00000637475 LMTK2Q8IWU2 1503 aa25■■□□□ 1.59
CACNA1A-241ENST00000637475 PPP6R1Q9UPN7 881 aa24.99■■□□□ 1.59
CACNA1A-241ENST00000637475 FSD2A1L4K1 749 aa24.98■■□□□ 1.59
CACNA1A-241ENST00000637475 CT47B1P0C2W7 299 aaPredicted RBP24.98■■□□□ 1.59
CACNA1A-241ENST00000637475 RWDD1Q9H446 243 aaPredicted RBP24.98■■□□□ 1.59
CACNA1A-241ENST00000637475 TBC1D2Q9BYX2 928 aa24.97■■□□□ 1.59
CACNA1A-241ENST00000637475 PCDHB15Q9Y5E8 787 aa24.97■■□□□ 1.59
CACNA1A-241ENST00000637475 ADGRB3O60242 1522 aa24.97■■□□□ 1.59
CACNA1A-241ENST00000637475 PDZRN3Q9UPQ7 1066 aa24.96■■□□□ 1.59
CACNA1A-241ENST00000637475 QRICH2Q9H0J4 1663 aa24.94■■□□□ 1.58
CACNA1A-241ENST00000637475 NSD3Q9BZ95 1437 aa24.94■■□□□ 1.58
CACNA1A-241ENST00000637475 PUS7Q96PZ0 661 aaKnown RBP24.93■■□□□ 1.58
CACNA1A-241ENST00000637475 CAMSAP1Q5T5Y3 1602 aa24.92■■□□□ 1.58
CACNA1A-241ENST00000637475 NSD2O96028 1365 aa24.92■■□□□ 1.58
CACNA1A-241ENST00000637475 RLBP1P12271 317 aa24.91■■□□□ 1.58
CACNA1A-241ENST00000637475 CFAP70Q5T0N1 1121 aa24.91■■□□□ 1.58
CACNA1A-241ENST00000637475 CERKQ8TCT0 537 aa24.91■■□□□ 1.58
CACNA1A-241ENST00000637475 SLKQ9H2G2 1235 aaPredicted RBP24.91■■□□□ 1.58
CACNA1A-241ENST00000637475 TCP11L2Q8N4U5 519 aa24.9■■□□□ 1.58
CACNA1A-241ENST00000637475 ISY1Q9ULR0 285 aaKnown RBP24.9■■□□□ 1.58
CACNA1A-241ENST00000637475 ADGRB1O14514 1584 aa24.9■■□□□ 1.58
CACNA1A-241ENST00000637475 NCOA3Q9Y6Q9 1424 aa24.9■■□□□ 1.58
CACNA1A-241ENST00000637475 MCM4P33991 863 aa24.89■■□□□ 1.58
CACNA1A-241ENST00000637475 ZNF142P52746 1687 aaPredicted RBP24.89■■□□□ 1.57
CACNA1A-241ENST00000637475 PPLO60437 1756 aa24.89■■□□□ 1.57
CACNA1A-241ENST00000637475 MVPQ14764 893 aaKnown RBP24.89■■□□□ 1.57
Retrieved 100 of 20,778 RNA–protein pairs in 378.9 ms