RNA–Protein interactions for RNA: ENST00000637383.1

SMARCA2-262, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2, human

TSL 5

Gene SMARCA2, Length 162 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SMARCA2-262	ENST00000637383	MEX3C	Q5U5Q3	659 aa	Known RBP	11.44	□□□□□ -0.58
SMARCA2-262	ENST00000637383	LRP6	O75581	1613 aa		11.44	□□□□□ -0.58
SMARCA2-262	ENST00000637383	NRXN1	Q9ULB1	1477 aa		11.44	□□□□□ -0.58
SMARCA2-262	ENST00000637383	YTHDC2	Q9H6S0	1430 aa	Known RBP	11.43	□□□□□ -0.58
SMARCA2-262	ENST00000637383	PLEKHH1	Q9ULM0	1364 aa		11.43	□□□□□ -0.58
SMARCA2-262	ENST00000637383	NUTM2B	A6NNL0	878 aa	Predicted RBP	11.43	□□□□□ -0.58
SMARCA2-262	ENST00000637383	NUTM2E	B1AL46	878 aa	Predicted RBP	11.43	□□□□□ -0.58
SMARCA2-262	ENST00000637383	NUTM2A	Q8IVF1	878 aa	Predicted RBP	11.43	□□□□□ -0.58
SMARCA2-262	ENST00000637383	SIRT1	Q96EB6	747 aa		11.43	□□□□□ -0.58
SMARCA2-262	ENST00000637383	MYOM2	P54296	1465 aa		11.43	□□□□□ -0.58
SMARCA2-262	ENST00000637383	IFT172	Q9UG01	1749 aa		11.43	□□□□□ -0.58
SMARCA2-262	ENST00000637383	SOS2	Q07890	1332 aa	Predicted RBP	11.42	□□□□□ -0.58
SMARCA2-262	ENST00000637383	ESCO1	Q5FWF5	840 aa		11.42	□□□□□ -0.58
SMARCA2-262	ENST00000637383	DHX57	Q6P158	1386 aa	Known RBP	11.41	□□□□□ -0.58
SMARCA2-262	ENST00000637383	DCAF11	Q8TEB1	546 aa		11.41	□□□□□ -0.58
SMARCA2-262	ENST00000637383	KDM2A	Q9Y2K7	1162 aa		11.41	□□□□□ -0.58
SMARCA2-262	ENST00000637383	PNPLA6	Q8IY17	1366 aa		11.41	□□□□□ -0.58
SMARCA2-262	ENST00000637383	SHPRH	Q149N8	1683 aa		11.4	□□□□□ -0.58
SMARCA2-262	ENST00000637383	NHSL1	Q5SYE7	1610 aa		11.4	□□□□□ -0.58
SMARCA2-262	ENST00000637383	NUTM2F	A1L443	756 aa		11.4	□□□□□ -0.58
SMARCA2-262	ENST00000637383	ZNF772	Q68DY9	489 aa	Predicted RBP	11.4	□□□□□ -0.58
SMARCA2-262	ENST00000637383	STAC3	Q96MF2	364 aa		11.4	□□□□□ -0.58
SMARCA2-262	ENST00000637383	FOXO3	O43524	673 aa		11.39	□□□□□ -0.59
SMARCA2-262	ENST00000637383	NCBP3	Q53F19	620 aa	Known RBP	11.39	□□□□□ -0.59
SMARCA2-262	ENST00000637383	CDC42BPG	Q6DT37	1551 aa		11.39	□□□□□ -0.59
SMARCA2-262	ENST00000637383	PRAM1	Q96QH2	718 aa		11.39	□□□□□ -0.59
SMARCA2-262	ENST00000637383	NPHP3	Q7Z494	1330 aa		11.38	□□□□□ -0.59
SMARCA2-262	ENST00000637383	SAFB2	Q14151	953 aa	Known RBP eCLIP	11.37	□□□□□ -0.59
SMARCA2-262	ENST00000637383	POGK	Q9P215	609 aa		11.37	□□□□□ -0.59
SMARCA2-262	ENST00000637383	LAMC1	P11047	1609 aa		11.37	□□□□□ -0.59
SMARCA2-262	ENST00000637383	AFF2	P51816	1311 aa		11.36	□□□□□ -0.59
SMARCA2-262	ENST00000637383	ADAMTS2	O95450	1211 aa		11.36	□□□□□ -0.59
SMARCA2-262	ENST00000637383	XPC	Q01831	940 aa	Predicted RBP	11.36	□□□□□ -0.59
SMARCA2-262	ENST00000637383	C8orf37	Q96NL8	207 aa		11.36	□□□□□ -0.59
SMARCA2-262	ENST00000637383	TRAK1	Q9UPV9	953 aa		11.36	□□□□□ -0.59
SMARCA2-262	ENST00000637383	KNDC1	Q76NI1	1749 aa		11.35	□□□□□ -0.59
SMARCA2-262	ENST00000637383	ADGRB1	O14514	1584 aa		11.34	□□□□□ -0.59
SMARCA2-262	ENST00000637383	PXDN	Q92626	1479 aa		11.34	□□□□□ -0.59
SMARCA2-262	ENST00000637383	RXRB	P28702	533 aa		11.34	□□□□□ -0.59
SMARCA2-262	ENST00000637383	NGLY1	Q96IV0	654 aa		11.34	□□□□□ -0.59
SMARCA2-262	ENST00000637383	PHF8	Q9UPP1	1060 aa		11.33	□□□□□ -0.6
SMARCA2-262	ENST00000637383	DLC1	Q96QB1	1528 aa		11.33	□□□□□ -0.6
SMARCA2-262	ENST00000637383	KRT28	Q7Z3Y7	464 aa		11.32	□□□□□ -0.6
SMARCA2-262	ENST00000637383	CNKSR2	Q8WXI2	1034 aa		11.32	□□□□□ -0.6
SMARCA2-262	ENST00000637383	HIRIP3	Q9BW71	556 aa	Predicted RBP	11.32	□□□□□ -0.6
SMARCA2-262	ENST00000637383	QTRT2	Q9H974	415 aa	Known RBP	11.32	□□□□□ -0.6
SMARCA2-262	ENST00000637383	MAPK8IP2	Q13387	824 aa	Predicted RBP	11.31	□□□□□ -0.6
SMARCA2-262	ENST00000637383	FNBP4	Q8N3X1	1017 aa	Predicted RBP	11.31	□□□□□ -0.6
SMARCA2-262	ENST00000637383	SPATA31A3	Q5VYP0	1347 aa		11.31	□□□□□ -0.6
SMARCA2-262	ENST00000637383	MINK1	Q8N4C8	1332 aa	Predicted RBP	11.31	□□□□□ -0.6
SMARCA2-262	ENST00000637383	FMN2	Q9NZ56	1722 aa		11.3	□□□□□ -0.6
SMARCA2-262	ENST00000637383	RBM6	P78332	1123 aa	Known RBP	11.3	□□□□□ -0.6
SMARCA2-262	ENST00000637383	ANKAR	Q7Z5J8	1434 aa		11.29	□□□□□ -0.6
SMARCA2-262	ENST00000637383	WASL	O00401	505 aa	Predicted RBP	11.29	□□□□□ -0.6
SMARCA2-262	ENST00000637383	PSME1	Q06323	249 aa		11.29	□□□□□ -0.6
SMARCA2-262	ENST00000637383	USP21	Q9UK80	565 aa		11.29	□□□□□ -0.6
SMARCA2-262	ENST00000637383	CDK12	Q9NYV4	1490 aa	Predicted RBP	11.28	□□□□□ -0.6
SMARCA2-262	ENST00000637383	NBPF1	Q3BBV0	1214 aa		11.28	□□□□□ -0.6
SMARCA2-262	ENST00000637383	PMFBP1	Q8TBY8	1022 aa		11.28	□□□□□ -0.6
SMARCA2-262	ENST00000637383	PRR36	Q9H6K5	1346 aa		11.28	□□□□□ -0.6
SMARCA2-262	ENST00000637383	COL22A1	Q8NFW1	1626 aa	Predicted RBP	11.27	□□□□□ -0.6
SMARCA2-262	ENST00000637383	TRPC5	Q9UL62	973 aa	Predicted RBP	11.27	□□□□□ -0.61
SMARCA2-262	ENST00000637383	ADGRB2	O60241	1585 aa		11.27	□□□□□ -0.61
SMARCA2-262	ENST00000637383	SBNO1	A3KN83	1393 aa		11.27	□□□□□ -0.61
SMARCA2-262	ENST00000637383	EIF3A	Q14152	1382 aa	Known RBP	11.27	□□□□□ -0.61
SMARCA2-262	ENST00000637383	KIF1A	Q12756	1690 aa		11.27	□□□□□ -0.61
SMARCA2-262	ENST00000637383	L3MBTL2	Q969R5	705 aa		11.26	□□□□□ -0.61
SMARCA2-262	ENST00000637383	SIN3A	Q96ST3	1273 aa		11.26	□□□□□ -0.61
SMARCA2-262	ENST00000637383	TNS3	Q68CZ2	1445 aa		11.26	□□□□□ -0.61
SMARCA2-262	ENST00000637383	LMOD2	Q6P5Q4	547 aa		11.25	□□□□□ -0.61
SMARCA2-262	ENST00000637383	CABLES1	Q8TDN4	633 aa		11.25	□□□□□ -0.61
SMARCA2-262	ENST00000637383	UPF1	Q92900	1129 aa	Known RBP eCLIP	11.25	□□□□□ -0.61
SMARCA2-262	ENST00000637383	BCL9L	Q86UU0	1499 aa		11.25	□□□□□ -0.61
SMARCA2-262	ENST00000637383	HAP1	P54257	671 aa	Predicted RBP	11.24	□□□□□ -0.61
SMARCA2-262	ENST00000637383	NUDT16	Q96DE0	195 aa	Known RBP	11.24	□□□□□ -0.61
SMARCA2-262	ENST00000637383	CDK19	Q9BWU1	502 aa		11.24	□□□□□ -0.61
SMARCA2-262	ENST00000637383	ARHGEF10	O15013	1369 aa		11.24	□□□□□ -0.61
SMARCA2-262	ENST00000637383	GPRASP1	Q5JY77	1395 aa		11.24	□□□□□ -0.61
SMARCA2-262	ENST00000637383	RGS12	O14924	1447 aa		11.24	□□□□□ -0.61
SMARCA2-262	ENST00000637383	ATRN	O75882	1429 aa		11.24	□□□□□ -0.61
SMARCA2-262	ENST00000637383	TULP4	Q9NRJ4	1543 aa		11.24	□□□□□ -0.61
SMARCA2-262	ENST00000637383	USP32	Q8NFA0	1604 aa		11.24	□□□□□ -0.61
SMARCA2-262	ENST00000637383	PLEKHG5	O94827	1062 aa		11.23	□□□□□ -0.61
SMARCA2-262	ENST00000637383	NEUROD1	Q13562	356 aa		11.23	□□□□□ -0.61
SMARCA2-262	ENST00000637383	NGDN	Q8NEJ9	315 aa	Known RBP	11.23	□□□□□ -0.61
SMARCA2-262	ENST00000637383	RGPD8	O14715	1765 aa	Predicted RBP	11.23	□□□□□ -0.61
SMARCA2-262	ENST00000637383	UNC5CL	Q8IV45	518 aa		11.22	□□□□□ -0.61
SMARCA2-262	ENST00000637383	SLIT2	O94813	1529 aa		11.21	□□□□□ -0.61
SMARCA2-262	ENST00000637383	NPM3	O75607	178 aa	Known RBP	11.21	□□□□□ -0.61
SMARCA2-262	ENST00000637383	GJD4	Q96KN9	370 aa	Predicted RBP	11.21	□□□□□ -0.61
SMARCA2-262	ENST00000637383	ATP7B	P35670	1465 aa		11.2	□□□□□ -0.62
SMARCA2-262	ENST00000637383	FAM83G	A6ND36	823 aa		11.2	□□□□□ -0.62
SMARCA2-262	ENST00000637383	CCDC61	Q9Y6R9	512 aa		11.2	□□□□□ -0.62
SMARCA2-262	ENST00000637383	ARHGEF28	Q8N1W1	1705 aa	Known RBP	11.2	□□□□□ -0.62
SMARCA2-262	ENST00000637383	KIAA1210	Q9ULL0	1709 aa		11.2	□□□□□ -0.62
SMARCA2-262	ENST00000637383	CENPJ	Q9HC77	1338 aa	Predicted RBP	11.19	□□□□□ -0.62
SMARCA2-262	ENST00000637383	PAK3	O75914	559 aa	Predicted RBP	11.19	□□□□□ -0.62
SMARCA2-262	ENST00000637383	ACE	P12821	1306 aa		11.18	□□□□□ -0.62
SMARCA2-262	ENST00000637383	PLEKHG3	A1L390	1219 aa		11.18	□□□□□ -0.62
SMARCA2-262	ENST00000637383	NBPF8	Q3BBV2	869 aa		11.18	□□□□□ -0.62

Retrieved 100 of 20,778 RNA–protein pairs in 118.5 ms