RNA–Protein interactions for RNA: ENST00000637354.1

PTPRD-215, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 5

Gene PTPRD, Length 891 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-215ENST00000637354 RB1CC1Q8TDY2 1594 aa9.46□□□□□ -0.9
PTPRD-215ENST00000637354 PLEKHG3A1L390 1219 aa9.44□□□□□ -0.9
PTPRD-215ENST00000637354 TNFRSF10AO00220 468 aa9.44□□□□□ -0.9
PTPRD-215ENST00000637354 PLA2G2CQ5R387 149 aa9.44□□□□□ -0.9
PTPRD-215ENST00000637354 NACADO15069 1562 aa9.43□□□□□ -0.9
PTPRD-215ENST00000637354 ZCCHC6Q5VYS8 1495 aaKnown RBP9.43□□□□□ -0.9
PTPRD-215ENST00000637354 GIGYF2Q6Y7W6 1299 aaKnown RBP9.43□□□□□ -0.9
PTPRD-215ENST00000637354 SULF1Q8IWU6 871 aa9.43□□□□□ -0.9
PTPRD-215ENST00000637354 PUS10Q3MIT2 529 aaKnown RBP9.42□□□□□ -0.9
PTPRD-215ENST00000637354 CRIPAKQ8N1N5 446 aa9.42□□□□□ -0.9
PTPRD-215ENST00000637354 SALL2Q9Y467 1007 aaPredicted RBP9.42□□□□□ -0.9
PTPRD-215ENST00000637354 MORN1Q5T089 497 aa9.41□□□□□ -0.9
PTPRD-215ENST00000637354 RDH13Q8NBN7 331 aa9.41□□□□□ -0.9
PTPRD-215ENST00000637354 SUPT5HO00267 1087 aaKnown RBP9.4□□□□□ -0.9
PTPRD-215ENST00000637354 MS4A1P11836 297 aa9.4□□□□□ -0.9
PTPRD-215ENST00000637354 ATP6V1AP38606 617 aa9.4□□□□□ -0.9
PTPRD-215ENST00000637354 MDM2Q00987 491 aaPredicted RBP9.4□□□□□ -0.9
PTPRD-215ENST00000637354 REPIN1Q9BWE0 567 aaKnown RBP9.4□□□□□ -0.9
PTPRD-215ENST00000637354 CD2BP2O95400 341 aaKnown RBP9.39□□□□□ -0.91
PTPRD-215ENST00000637354 FMNL1O95466 1100 aaPredicted RBP9.39□□□□□ -0.91
PTPRD-215ENST00000637354 THAP11Q96EK4 314 aa9.39□□□□□ -0.91
PTPRD-215ENST00000637354 PKD2L1Q9P0L9 805 aa9.39□□□□□ -0.91
PTPRD-215ENST00000637354 CLCN1P35523 988 aa9.38□□□□□ -0.91
PTPRD-215ENST00000637354 FUT2Q10981 343 aa9.38□□□□□ -0.91
PTPRD-215ENST00000637354 PHOX2BQ99453 314 aa9.38□□□□□ -0.91
PTPRD-215ENST00000637354 AAASQ9NRG9 546 aa9.38□□□□□ -0.91
PTPRD-215ENST00000637354 UNC13AQ9UPW8 1703 aa9.37□□□□□ -0.91
PTPRD-215ENST00000637354 AVPP01185 164 aa9.37□□□□□ -0.91
PTPRD-215ENST00000637354 GRIPAP1Q4V328 841 aa9.37□□□□□ -0.91
PTPRD-215ENST00000637354 GPCPD1Q9NPB8 672 aa9.37□□□□□ -0.91
PTPRD-215ENST00000637354 FCF1Q9Y324 198 aaKnown RBP9.37□□□□□ -0.91
PTPRD-215ENST00000637354 DDX11L8A8MPP1 907 aa9.36□□□□□ -0.91
PTPRD-215ENST00000637354 GCGRP47871 477 aa9.36□□□□□ -0.91
PTPRD-215ENST00000637354 CTC1Q2NKJ3 1217 aa9.36□□□□□ -0.91
PTPRD-215ENST00000637354 MSS51Q4VC12 460 aa9.36□□□□□ -0.91
PTPRD-215ENST00000637354 NLRP7Q8WX94 980 aa9.36□□□□□ -0.91
PTPRD-215ENST00000637354 FOXC1Q12948 553 aa9.35□□□□□ -0.91
PTPRD-215ENST00000637354 TOR4AQ9NXH8 423 aa9.35□□□□□ -0.91
PTPRD-215ENST00000637354 SSTR3P32745 418 aaPredicted RBP9.34□□□□□ -0.91
PTPRD-215ENST00000637354 SLC27A5Q9Y2P5 690 aa9.34□□□□□ -0.91
PTPRD-215ENST00000637354 POTECB2RU33 542 aa9.33□□□□□ -0.92
PTPRD-215ENST00000637354 ST8SIA5O15466 376 aa9.33□□□□□ -0.92
PTPRD-215ENST00000637354 CYP4X1Q8N118 509 aa9.33□□□□□ -0.92
PTPRD-215ENST00000637354 FAM160A2Q8N612 972 aaPredicted RBP9.33□□□□□ -0.92
PTPRD-215ENST00000637354 PCMTD1Q96MG8 357 aaPredicted RBP9.33□□□□□ -0.92
PTPRD-215ENST00000637354 ATP1B4Q9UN42 357 aaPredicted RBP9.33□□□□□ -0.92
PTPRD-215ENST00000637354 MYO15BQ96JP2 1530 aa9.32□□□□□ -0.92
PTPRD-215ENST00000637354 ZBTB24O43167 697 aaPredicted RBP9.32□□□□□ -0.92
PTPRD-215ENST00000637354 SMCPP49901 116 aaPredicted RBP9.32□□□□□ -0.92
PTPRD-215ENST00000637354 BRICD5Q6PL45 260 aa9.32□□□□□ -0.92
PTPRD-215ENST00000637354 Q3C1V9 767 aa9.31□□□□□ -0.92
PTPRD-215ENST00000637354 DCAF1Q9Y4B6 1507 aa9.31□□□□□ -0.92
PTPRD-215ENST00000637354 TREML4Q6UXN2 200 aa9.3□□□□□ -0.92
PTPRD-215ENST00000637354 BEGAINQ9BUH8 593 aa9.3□□□□□ -0.92
PTPRD-215ENST00000637354 ZMYND15Q9H091 742 aa9.3□□□□□ -0.92
PTPRD-215ENST00000637354 GOPCQ9HD26 462 aa9.3□□□□□ -0.92
PTPRD-215ENST00000637354 AXIN1O15169 862 aa9.29□□□□□ -0.92
PTPRD-215ENST00000637354 FAM217BQ9NTX9 383 aaPredicted RBP9.28□□□□□ -0.92
PTPRD-215ENST00000637354 WNT7AO00755 349 aa9.27□□□□□ -0.93
PTPRD-215ENST00000637354 MMP16P51512 607 aa9.27□□□□□ -0.93
PTPRD-215ENST00000637354 SH3D19Q5HYK7 790 aa9.27□□□□□ -0.93
PTPRD-215ENST00000637354 LCE2AQ5TA79 106 aaPredicted RBP9.27□□□□□ -0.93
PTPRD-215ENST00000637354 ARXQ96QS3 562 aa9.27□□□□□ -0.93
PTPRD-215ENST00000637354 PRDM9Q9NQV7 894 aa9.27□□□□□ -0.93
PTPRD-215ENST00000637354 BICRAQ9NZM4 1560 aa9.27□□□□□ -0.93
PTPRD-215ENST00000637354 RSPH6AQ9H0K4 717 aa9.26□□□□□ -0.93
PTPRD-215ENST00000637354 SCRIBQ14160 1630 aa9.26□□□□□ -0.93
PTPRD-215ENST00000637354 TTC24A2A3L6 582 aaPredicted RBP9.25□□□□□ -0.93
PTPRD-215ENST00000637354 RNF19BQ6ZMZ0 732 aa9.25□□□□□ -0.93
PTPRD-215ENST00000637354 POLR3EQ9NVU0 708 aa9.25□□□□□ -0.93
PTPRD-215ENST00000637354 CD46P15529 392 aa9.24□□□□□ -0.93
PTPRD-215ENST00000637354 USP46P62068 366 aa9.24□□□□□ -0.93
PTPRD-215ENST00000637354 FLIIQ13045 1269 aa9.24□□□□□ -0.93
PTPRD-215ENST00000637354 TRIM32Q13049 653 aa9.24□□□□□ -0.93
PTPRD-215ENST00000637354 SNIP1Q8TAD8 396 aaKnown RBP9.24□□□□□ -0.93
PTPRD-215ENST00000637354 SKIV2LQ15477 1246 aaKnown RBP9.23□□□□□ -0.93
PTPRD-215ENST00000637354 C11orf95C9JLR9 678 aaPredicted RBP9.22□□□□□ -0.93
PTPRD-215ENST00000637354 GMPR2Q9P2T1 348 aaKnown RBP9.22□□□□□ -0.93
PTPRD-215ENST00000637354 DXOO77932 396 aaKnown RBP9.21□□□□□ -0.94
PTPRD-215ENST00000637354 PROCA1Q8NCQ7 364 aaPredicted RBP9.21□□□□□ -0.94
PTPRD-215ENST00000637354 USB1Q9BQ65 265 aaKnown RBP9.21□□□□□ -0.94
PTPRD-215ENST00000637354 KDM4AO75164 1064 aa9.2□□□□□ -0.94
PTPRD-215ENST00000637354 WFS1O76024 890 aa9.2□□□□□ -0.94
PTPRD-215ENST00000637354 DACH1Q9UI36 760 aa9.2□□□□□ -0.94
PTPRD-215ENST00000637354 SMPD1P17405 629 aa9.19□□□□□ -0.94
PTPRD-215ENST00000637354 MYSM1Q5VVJ2 828 aa9.19□□□□□ -0.94
PTPRD-215ENST00000637354 HOMEZQ8IX15 550 aa9.19□□□□□ -0.94
PTPRD-215ENST00000637354 TBC1D2Q9BYX2 928 aa9.19□□□□□ -0.94
PTPRD-215ENST00000637354 SENP2Q9HC62 589 aa9.19□□□□□ -0.94
PTPRD-215ENST00000637354 WNT7BP56706 349 aa9.18□□□□□ -0.94
PTPRD-215ENST00000637354 CLK2P49760 499 aaKnown RBP9.17□□□□□ -0.94
PTPRD-215ENST00000637354 MRGPRX2Q96LB1 330 aa9.17□□□□□ -0.94
PTPRD-215ENST00000637354 WIPF1O43516 503 aa9.16□□□□□ -0.94
PTPRD-215ENST00000637354 KIFC2Q96AC6 838 aa9.16□□□□□ -0.94
PTPRD-215ENST00000637354 ATP13A2Q9NQ11 1180 aa9.16□□□□□ -0.94
PTPRD-215ENST00000637354 UBTFP17480 764 aaKnown RBP9.15□□□□□ -0.94
PTPRD-215ENST00000637354 NFX1Q12986 1120 aaKnown RBP9.15□□□□□ -0.94
PTPRD-215ENST00000637354 DIXDC1Q155Q3 683 aa9.15□□□□□ -0.94
PTPRD-215ENST00000637354 HOXA2O43364 376 aa9.14□□□□□ -0.95
PTPRD-215ENST00000637354 INSM1Q01101 510 aaPredicted RBP9.14□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms