RNA–Protein interactions for RNA: ENST00000637329.1

CLN6-219, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 1,204 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-219ENST00000637329 PIP4K2BP78356 416 aa21.18■□□□□ 0.98
CLN6-219ENST00000637329 PUS7Q96PZ0 661 aaKnown RBP21.18■□□□□ 0.98
CLN6-219ENST00000637329 PIK3R4Q99570 1358 aa21.18■□□□□ 0.98
CLN6-219ENST00000637329 SIRT1Q96EB6 747 aa21.17■□□□□ 0.98
CLN6-219ENST00000637329 POLR3GLQ9BT43 218 aa21.17■□□□□ 0.98
CLN6-219ENST00000637329 XRN1Q8IZH2 1706 aaKnown RBP21.17■□□□□ 0.98
CLN6-219ENST00000637329 MED1Q15648 1581 aaPredicted RBP21.16■□□□□ 0.98
CLN6-219ENST00000637329 PTCH1Q13635 1447 aa21.16■□□□□ 0.98
CLN6-219ENST00000637329 TBX22Q9Y458 520 aa21.16■□□□□ 0.98
CLN6-219ENST00000637329 ADGRB2O60241 1585 aa21.15■□□□□ 0.98
CLN6-219ENST00000637329 ANKLE2Q86XL3 938 aa21.15■□□□□ 0.98
CLN6-219ENST00000637329 EVC2Q86UK5 1308 aa21.14■□□□□ 0.97
CLN6-219ENST00000637329 BCANQ96GW7 911 aa21.14■□□□□ 0.97
CLN6-219ENST00000637329 STK26Q9P289 416 aa21.14■□□□□ 0.97
CLN6-219ENST00000637329 PRAM1Q96QH2 718 aa21.13■□□□□ 0.97
CLN6-219ENST00000637329 KTN1Q86UP2 1357 aaKnown RBP21.12■□□□□ 0.97
CLN6-219ENST00000637329 NINLQ9Y2I6 1382 aa21.12■□□□□ 0.97
CLN6-219ENST00000637329 POGKQ9P215 609 aa21.11■□□□□ 0.97
CLN6-219ENST00000637329 CCER2I3L3R5 266 aa21.1■□□□□ 0.97
CLN6-219ENST00000637329 SENP3Q9H4L4 574 aaPredicted RBP21.1■□□□□ 0.97
CLN6-219ENST00000637329 NPHP4O75161 1426 aaPredicted RBP21.1■□□□□ 0.97
CLN6-219ENST00000637329 PTPRUQ92729 1446 aa21.09■□□□□ 0.97
CLN6-219ENST00000637329 ATAD2Q6PL18 1390 aa21.09■□□□□ 0.97
CLN6-219ENST00000637329 USP32Q8NFA0 1604 aa21.06■□□□□ 0.96
CLN6-219ENST00000637329 ROBO2Q9HCK4 1378 aa21.06■□□□□ 0.96
CLN6-219ENST00000637329 NWD1Q149M9 1564 aa21.06■□□□□ 0.96
CLN6-219ENST00000637329 SLC26A8Q96RN1 970 aa21.05■□□□□ 0.96
CLN6-219ENST00000637329 PRKRIP1Q9H875 184 aaPredicted RBP21.05■□□□□ 0.96
CLN6-219ENST00000637329 CHD2O14647 1828 aaKnown RBP21.05■□□□□ 0.96
CLN6-219ENST00000637329 PLEKHH1Q9ULM0 1364 aa21.05■□□□□ 0.96
CLN6-219ENST00000637329 NPC1L1Q9UHC9 1359 aa21.03■□□□□ 0.96
CLN6-219ENST00000637329 PER1O15534 1290 aaPredicted RBP21.02■□□□□ 0.96
CLN6-219ENST00000637329 SAFB2Q14151 953 aaKnown RBP eCLIP21.02■□□□□ 0.96
CLN6-219ENST00000637329 PANK3Q9H999 370 aa21.02■□□□□ 0.96
CLN6-219ENST00000637329 MINK1Q8N4C8 1332 aaPredicted RBP21.02■□□□□ 0.95
CLN6-219ENST00000637329 SIPA1L2Q9P2F8 1722 aaPredicted RBP21.01■□□□□ 0.95
CLN6-219ENST00000637329 ANKRD36BQ8N2N9 1353 aa20.99■□□□□ 0.95
CLN6-219ENST00000637329 WAPLQ7Z5K2 1190 aa20.99■□□□□ 0.95
CLN6-219ENST00000637329 AMOTL2Q9Y2J4 779 aa20.99■□□□□ 0.95
CLN6-219ENST00000637329 ATP7BP35670 1465 aa20.99■□□□□ 0.95
CLN6-219ENST00000637329 PARD3Q8TEW0 1356 aa20.98■□□□□ 0.95
CLN6-219ENST00000637329 TOPAZ1Q8N9V7 1692 aa20.97■□□□□ 0.95
CLN6-219ENST00000637329 SRPK2P78362 688 aaKnown RBP20.97■□□□□ 0.95
CLN6-219ENST00000637329 RALBP1Q15311 655 aa20.97■□□□□ 0.95
CLN6-219ENST00000637329 NKTRP30414 1462 aaKnown RBP20.96■□□□□ 0.95
CLN6-219ENST00000637329 CDC42BPGQ6DT37 1551 aa20.95■□□□□ 0.94
CLN6-219ENST00000637329 WASLO00401 505 aaPredicted RBP20.95■□□□□ 0.94
CLN6-219ENST00000637329 CDK19Q9BWU1 502 aa20.95■□□□□ 0.94
CLN6-219ENST00000637329 KNSTRNQ9Y448 316 aa20.95■□□□□ 0.94
CLN6-219ENST00000637329 CABP2Q9NPB3 220 aa20.94■□□□□ 0.94
CLN6-219ENST00000637329 ITSN1Q15811 1721 aa20.92■□□□□ 0.94
CLN6-219ENST00000637329 MYBBP1AQ9BQG0 1328 aaKnown RBP20.92■□□□□ 0.94
CLN6-219ENST00000637329 NSD3Q9BZ95 1437 aa20.92■□□□□ 0.94
CLN6-219ENST00000637329 NALCNQ8IZF0 1738 aa20.92■□□□□ 0.94
CLN6-219ENST00000637329 NSD2O96028 1365 aa20.91■□□□□ 0.94
CLN6-219ENST00000637329 CD163L1Q9NR16 1453 aa20.91■□□□□ 0.94
CLN6-219ENST00000637329 A0A1W2PP64 1363 aa20.9■□□□□ 0.94
CLN6-219ENST00000637329 KCNA6P17658 529 aa20.9■□□□□ 0.94
CLN6-219ENST00000637329 AMER1Q5JTC6 1135 aaPredicted RBP20.9■□□□□ 0.94
CLN6-219ENST00000637329 TMC1Q8TDI8 760 aa20.9■□□□□ 0.94
CLN6-219ENST00000637329 FMN2Q9NZ56 1722 aa20.9■□□□□ 0.94
CLN6-219ENST00000637329 ANKARQ7Z5J8 1434 aa20.89■□□□□ 0.94
CLN6-219ENST00000637329 SLC12A5Q9H2X9 1139 aa20.89■□□□□ 0.93
CLN6-219ENST00000637329 ADGRL3Q9HAR2 1447 aa20.88■□□□□ 0.93
CLN6-219ENST00000637329 BRD4O60885 1362 aaPredicted RBP20.88■□□□□ 0.93
CLN6-219ENST00000637329 TERF2IPQ9NYB0 399 aa20.88■□□□□ 0.93
CLN6-219ENST00000637329 PPIP5K1Q6PFW1 1433 aa20.87■□□□□ 0.93
CLN6-219ENST00000637329 MON2Q7Z3U7 1717 aa20.87■□□□□ 0.93
CLN6-219ENST00000637329 ANKRD26Q9UPS8 1709 aa20.87■□□□□ 0.93
CLN6-219ENST00000637329 CARD14Q9BXL6 1004 aa20.86■□□□□ 0.93
CLN6-219ENST00000637329 AKAP12Q02952 1782 aa20.86■□□□□ 0.93
CLN6-219ENST00000637329 CPSF1Q10570 1443 aaKnown RBP20.85■□□□□ 0.93
CLN6-219ENST00000637329 CGNL1Q0VF96 1302 aa20.84■□□□□ 0.93
CLN6-219ENST00000637329 HDGFL2Q7Z4V5 671 aaPredicted RBP20.84■□□□□ 0.93
CLN6-219ENST00000637329 NLRP13Q86W25 1043 aa20.84■□□□□ 0.93
CLN6-219ENST00000637329 KIF20BQ96Q89 1820 aa20.83■□□□□ 0.93
CLN6-219ENST00000637329 NUDT16Q96DE0 195 aaKnown RBP20.83■□□□□ 0.93
CLN6-219ENST00000637329 CCDC61Q9Y6R9 512 aa20.83■□□□□ 0.93
CLN6-219ENST00000637329 NRKQ7Z2Y5 1582 aa20.82■□□□□ 0.92
CLN6-219ENST00000637329 EDC4Q6P2E9 1401 aaKnown RBP20.82■□□□□ 0.92
CLN6-219ENST00000637329 NCOA3Q9Y6Q9 1424 aa20.82■□□□□ 0.92
CLN6-219ENST00000637329 CC2D1BQ5T0F9 858 aaKnown RBP20.82■□□□□ 0.92
CLN6-219ENST00000637329 MRS2Q9HD23 443 aa20.81■□□□□ 0.92
CLN6-219ENST00000637329 PRR36Q9H6K5 1346 aa20.8■□□□□ 0.92
CLN6-219ENST00000637329 CABP1Q9NZU7 370 aa20.79■□□□□ 0.92
CLN6-219ENST00000637329 STRCP1A6NGW2 1772 aa20.78■□□□□ 0.92
CLN6-219ENST00000637329 DCCP43146 1447 aa20.78■□□□□ 0.92
CLN6-219ENST00000637329 PLEKHG3A1L390 1219 aa20.76■□□□□ 0.91
CLN6-219ENST00000637329 RGS17Q9UGC6 210 aaPredicted RBP20.76■□□□□ 0.91
CLN6-219ENST00000637329 POLR3AO14802 1390 aaPredicted RBP20.74■□□□□ 0.91
CLN6-219ENST00000637329 CNGB1Q14028 1251 aaPredicted RBP20.74■□□□□ 0.91
CLN6-219ENST00000637329 YTHDC1Q96MU7 727 aaKnown RBP20.74■□□□□ 0.91
CLN6-219ENST00000637329 ZNF692Q9BU19 519 aaPredicted RBP20.74■□□□□ 0.91
CLN6-219ENST00000637329 CENPBP07199 599 aaPredicted RBP20.73■□□□□ 0.91
CLN6-219ENST00000637329 CCDC184Q52MB2 194 aa20.73■□□□□ 0.91
CLN6-219ENST00000637329 INSRP06213 1382 aa20.72■□□□□ 0.91
CLN6-219ENST00000637329 USP6P35125 1406 aa20.72■□□□□ 0.91
CLN6-219ENST00000637329 PPP2R1AP30153 589 aa20.72■□□□□ 0.91
CLN6-219ENST00000637329 RGPD8O14715 1765 aaPredicted RBP20.7■□□□□ 0.9
CLN6-219ENST00000637329 MORC1Q86VD1 984 aa20.7■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms