RNA–Protein interactions for RNA: ENST00000637239.2

TCF4-285, Transcript of transcription factor 4, humanhuman

TSL 5

Gene TCF4, Length 7,771 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-285ENST00000637239 ZNF652Q9Y2D9 606 aa8.06□□□□□ -1.12
TCF4-285ENST00000637239 NFXL1Q6ZNB6 911 aa8.06□□□□□ -1.12
TCF4-285ENST00000637239 SYAP1Q96A49 352 aaPredicted RBP8.06□□□□□ -1.12
TCF4-285ENST00000637239 MFAP1P55081 439 aaKnown RBP8.06□□□□□ -1.12
TCF4-285ENST00000637239 NBPF8Q3BBV2 869 aa8.06□□□□□ -1.12
TCF4-285ENST00000637239 NBPF14Q5TI25 921 aa8.06□□□□□ -1.12
TCF4-285ENST00000637239 ZPR1O75312 459 aa8.06□□□□□ -1.12
TCF4-285ENST00000637239 DDX54Q8TDD1 881 aaKnown RBP8.06□□□□□ -1.12
TCF4-285ENST00000637239 TSPYL4Q9UJ04 414 aa8.06□□□□□ -1.12
TCF4-285ENST00000637239 TSR1Q2NL82 804 aaKnown RBP8.06□□□□□ -1.12
TCF4-285ENST00000637239 FAM184AQ8NB25 1140 aa8.06□□□□□ -1.12
TCF4-285ENST00000637239 MPHOSPH10O00566 681 aaKnown RBP8.05□□□□□ -1.12
TCF4-285ENST00000637239 TBC1D2BQ9UPU7 963 aa8.05□□□□□ -1.12
TCF4-285ENST00000637239 NOL8Q76FK4 1167 aaKnown RBP8.05□□□□□ -1.12
TCF4-285ENST00000637239 FAM177BA6PVY3 158 aa8.05□□□□□ -1.12
TCF4-285ENST00000637239 UTP3Q9NQZ2 479 aaKnown RBP eCLIP8.05□□□□□ -1.124e-6■■■■■ 111.8
TCF4-285ENST00000637239 HSP90AB4PQ58FF6 505 aa8.05□□□□□ -1.12
TCF4-285ENST00000637239 CCDC146Q8IYE0 955 aa8.05□□□□□ -1.12
TCF4-285ENST00000637239 GAS2L2Q8NHY3 880 aa8.05□□□□□ -1.12
TCF4-285ENST00000637239 SPDYE4A6NLX3 237 aa8.05□□□□□ -1.12
TCF4-285ENST00000637239 BRMS1Q9HCU9 246 aa8.05□□□□□ -1.12
TCF4-285ENST00000637239 CENPJQ9HC77 1338 aaPredicted RBP8.04□□□□□ -1.12
TCF4-285ENST00000637239 KIF15Q9NS87 1388 aa8.04□□□□□ -1.12
TCF4-285ENST00000637239 TMEM87AQ8NBN3 555 aa8.04□□□□□ -1.12
TCF4-285ENST00000637239 DIAPH3Q9NSV4 1193 aa8.04□□□□□ -1.12
TCF4-285ENST00000637239 EPRSP07814 1512 aaKnown RBP8.04□□□□□ -1.12
TCF4-285ENST00000637239 CCER2I3L3R5 266 aa8.04□□□□□ -1.12
TCF4-285ENST00000637239 POLD1P28340 1107 aa8.04□□□□□ -1.12
TCF4-285ENST00000637239 PRXQ9BXM0 1461 aa8.04□□□□□ -1.12
TCF4-285ENST00000637239 PLIN1O60240 522 aa8.04□□□□□ -1.12
TCF4-285ENST00000637239 ADAMTS2O95450 1211 aa8.04□□□□□ -1.12
TCF4-285ENST00000637239 FOXD4L1Q9NU39 408 aa8.04□□□□□ -1.12
TCF4-285ENST00000637239 PES1O00541 588 aaKnown RBP8.03□□□□□ -1.12
TCF4-285ENST00000637239 TPM3P06753 285 aa8.03□□□□□ -1.12
TCF4-285ENST00000637239 SCAPERQ9BY12 1400 aa8.03□□□□□ -1.12
TCF4-285ENST00000637239 KAT6BQ8WYB5 2073 aa8.03□□□□□ -1.12
TCF4-285ENST00000637239 AIMP1Q12904 312 aaKnown RBP8.03□□□□□ -1.12
TCF4-285ENST00000637239 PAF1Q8N7H5 531 aa8.03□□□□□ -1.12
TCF4-285ENST00000637239 ZNF692Q9BU19 519 aaPredicted RBP8.03□□□□□ -1.12
TCF4-285ENST00000637239 CNNM1Q9NRU3 951 aa8.02□□□□□ -1.12
TCF4-285ENST00000637239 DENND4BO75064 1496 aaPredicted RBP8.02□□□□□ -1.13
TCF4-285ENST00000637239 HSP90AA2PQ14568 343 aaPredicted RBP8.02□□□□□ -1.13
TCF4-285ENST00000637239 RILPL2Q969X0 211 aa8.02□□□□□ -1.13
TCF4-285ENST00000637239 HOOK1Q9UJC3 728 aaKnown RBP8.02□□□□□ -1.13
TCF4-285ENST00000637239 SLC4A3P48751 1232 aa8.02□□□□□ -1.13
TCF4-285ENST00000637239 VSIG10Q8N0Z9 540 aa8.02□□□□□ -1.13
TCF4-285ENST00000637239 NECTIN2Q92692 538 aa8.02□□□□□ -1.13
TCF4-285ENST00000637239 BCL11BQ9C0K0 894 aaPredicted RBP8.02□□□□□ -1.13
TCF4-285ENST00000637239 EHBP1L1Q8N3D4 1523 aa8.02□□□□□ -1.13
TCF4-285ENST00000637239 XBP1P17861 261 aa8.02□□□□□ -1.13
TCF4-285ENST00000637239 PNISRQ8TF01 805 aaKnown RBP8.02□□□□□ -1.13
TCF4-285ENST00000637239 DNAI2Q9GZS0 605 aa8.02□□□□□ -1.13
TCF4-285ENST00000637239 RSPH6AQ9H0K4 717 aa8.01□□□□□ -1.13
TCF4-285ENST00000637239 TRIM21P19474 475 aaKnown RBP8.01□□□□□ -1.13
TCF4-285ENST00000637239 TNNT3P45378 269 aaPredicted RBP8.01□□□□□ -1.13
TCF4-285ENST00000637239 ZNF608Q9ULD9 1512 aaPredicted RBP8.01□□□□□ -1.13
TCF4-285ENST00000637239 MSH6P52701 1360 aa8.01□□□□□ -1.13
TCF4-285ENST00000637239 TPM1P09493 284 aa8.01□□□□□ -1.13
TCF4-285ENST00000637239 FOXD4L5Q5VV16 416 aaPredicted RBP8.01□□□□□ -1.13
TCF4-285ENST00000637239 FOXD4L4Q8WXT5 416 aaPredicted RBP8.01□□□□□ -1.13
TCF4-285ENST00000637239 GOLGA6L1Q8N7Z2 621 aa8.01□□□□□ -1.13
TCF4-285ENST00000637239 RNF20Q5VTR2 975 aa8.01□□□□□ -1.13
TCF4-285ENST00000637239 CLUAP1Q96AJ1 413 aa8.01□□□□□ -1.13
TCF4-285ENST00000637239 RAB3GAP2Q9H2M9 1393 aa8.01□□□□□ -1.13
TCF4-285ENST00000637239 STARD3NLO95772 234 aa8.01□□□□□ -1.13
TCF4-285ENST00000637239 FKBP5Q13451 457 aaPredicted RBP8.01□□□□□ -1.13
TCF4-285ENST00000637239 CPLX1O14810 134 aa8□□□□□ -1.13
TCF4-285ENST00000637239 TSHZ2Q9NRE2 1034 aa8□□□□□ -1.13
TCF4-285ENST00000637239 ERC2O15083 957 aa8□□□□□ -1.13
TCF4-285ENST00000637239 ODF2Q5BJF6 829 aa8□□□□□ -1.13
TCF4-285ENST00000637239 KCNH5Q8NCM2 988 aa8□□□□□ -1.13
TCF4-285ENST00000637239 SART3Q15020 963 aaKnown RBP8□□□□□ -1.13
TCF4-285ENST00000637239 AK7Q96M32 723 aa8□□□□□ -1.13
TCF4-285ENST00000637239 NEUROD6Q96NK8 337 aa8□□□□□ -1.13
TCF4-285ENST00000637239 ST18O60284 1047 aa8□□□□□ -1.13
TCF4-285ENST00000637239 TCERG1O14776 1098 aaKnown RBP8□□□□□ -1.13
TCF4-285ENST00000637239 SAFBQ15424 915 aaKnown RBP eCLIP8□□□□□ -1.13
TCF4-285ENST00000637239 ZSCAN29Q8IWY8 852 aaPredicted RBP8□□□□□ -1.13
TCF4-285ENST00000637239 ANKRD20A12PQ8NF67 263 aa8□□□□□ -1.13
TCF4-285ENST00000637239 RRP7AQ9Y3A4 280 aaKnown RBP8□□□□□ -1.13
TCF4-285ENST00000637239 BIVM-ERCC5R4GMW8 1640 aa8□□□□□ -1.13
TCF4-285ENST00000637239 API5Q9BZZ5 524 aaKnown RBP7.99□□□□□ -1.13
TCF4-285ENST00000637239 TTC39AQ5SRH9 613 aa7.99□□□□□ -1.13
TCF4-285ENST00000637239 PANK3Q9H999 370 aa7.99□□□□□ -1.13
TCF4-285ENST00000637239 WASHC4Q2M389 1173 aa7.99□□□□□ -1.13
TCF4-285ENST00000637239 PHF14O94880 888 aa7.99□□□□□ -1.13
TCF4-285ENST00000637239 GNAI1P63096 354 aa7.99□□□□□ -1.13
TCF4-285ENST00000637239 KANK4Q5T7N3 995 aaPredicted RBP7.99□□□□□ -1.13
TCF4-285ENST00000637239 RPGRQ92834 1020 aaKnown RBP7.99□□□□□ -1.13
TCF4-285ENST00000637239 ATP2B2Q01814 1243 aa7.99□□□□□ -1.13
TCF4-285ENST00000637239 CCDC30Q5VVM6 783 aa7.99□□□□□ -1.13
TCF4-285ENST00000637239 MPHOSPH8Q99549 860 aa7.98□□□□□ -1.13
TCF4-285ENST00000637239 RTEL1-TNFRSF6BF6WH68 1400 aa7.98□□□□□ -1.13
TCF4-285ENST00000637239 RALYLQ86SE5 291 aaKnown RBP7.98□□□□□ -1.13
TCF4-285ENST00000637239 PCMTD1Q96MG8 357 aaPredicted RBP7.98□□□□□ -1.13
TCF4-285ENST00000637239 ZKSCAN1P17029 563 aaPredicted RBP7.98□□□□□ -1.13
TCF4-285ENST00000637239 TMOD3Q9NYL9 352 aa7.98□□□□□ -1.13
TCF4-285ENST00000637239 GOLGA6L3A6NEY3 463 aa7.98□□□□□ -1.13
TCF4-285ENST00000637239 AFAP1Q8N556 730 aa7.98□□□□□ -1.13
TCF4-285ENST00000637239 DDX24Q9GZR7 859 aaKnown RBP eCLIP7.98□□□□□ -1.132e-6■■■■■ 27.4
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms