RNA–Protein interactions for RNA: ENST00000637226.1

GABRB3-222, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, human

TSL 5

Gene GABRB3, Length 100 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
GABRB3-222	ENST00000637226	LCE2A	Q5TA79	106 aa	Predicted RBP	4.65	□□□□□ -1.67
GABRB3-222	ENST00000637226	RNF19B	Q6ZMZ0	732 aa		4.65	□□□□□ -1.67
GABRB3-222	ENST00000637226	SNIP1	Q8TAD8	396 aa	Known RBP	4.65	□□□□□ -1.67
GABRB3-222	ENST00000637226	WNT7A	O00755	349 aa		4.64	□□□□□ -1.67
GABRB3-222	ENST00000637226	GPR37	O15354	613 aa		4.64	□□□□□ -1.67
GABRB3-222	ENST00000637226	SMPD1	P17405	629 aa		4.63	□□□□□ -1.67
GABRB3-222	ENST00000637226	TRIM32	Q13049	653 aa		4.63	□□□□□ -1.67
GABRB3-222	ENST00000637226	GPIHBP1	Q8IV16	184 aa		4.63	□□□□□ -1.67
GABRB3-222	ENST00000637226	PHOX2B	Q99453	314 aa		4.63	□□□□□ -1.67
GABRB3-222	ENST00000637226	NFX1	Q12986	1120 aa	Known RBP	4.62	□□□□□ -1.67
GABRB3-222	ENST00000637226	CCDC24	Q8N4L8	307 aa		4.62	□□□□□ -1.67
GABRB3-222	ENST00000637226	MRGPRX2	Q96LB1	330 aa		4.62	□□□□□ -1.67
GABRB3-222	ENST00000637226	USB1	Q9BQ65	265 aa	Known RBP	4.62	□□□□□ -1.67
GABRB3-222	ENST00000637226	REPIN1	Q9BWE0	567 aa	Known RBP	4.62	□□□□□ -1.67
GABRB3-222	ENST00000637226	SENP2	Q9HC62	589 aa		4.62	□□□□□ -1.67
GABRB3-222	ENST00000637226	ATP13A2	Q9NQ11	1180 aa		4.62	□□□□□ -1.67
GABRB3-222	ENST00000637226		J3QL48	77 aa		4.61	□□□□□ -1.67
GABRB3-222	ENST00000637226	KDM4A	O75164	1064 aa		4.61	□□□□□ -1.67
GABRB3-222	ENST00000637226	CD46	P15529	392 aa		4.61	□□□□□ -1.67
GABRB3-222	ENST00000637226	MMP16	P51512	607 aa		4.61	□□□□□ -1.67
GABRB3-222	ENST00000637226	INSM1	Q01101	510 aa	Predicted RBP	4.61	□□□□□ -1.67
GABRB3-222	ENST00000637226	STK17A	Q9UEE5	414 aa		4.61	□□□□□ -1.67
GABRB3-222	ENST00000637226	TERT	O14746	1132 aa	Known RBP	4.59	□□□□□ -1.67
GABRB3-222	ENST00000637226	WIPF1	O43516	503 aa		4.59	□□□□□ -1.67
GABRB3-222	ENST00000637226	DXO	O77932	396 aa	Known RBP	4.59	□□□□□ -1.67
GABRB3-222	ENST00000637226	SNRPB	P14678	240 aa	Known RBP	4.59	□□□□□ -1.67
GABRB3-222	ENST00000637226	RC3H1	Q5TC82	1133 aa	Known RBP	4.59	□□□□□ -1.67
GABRB3-222	ENST00000637226	HPS1	Q92902	700 aa		4.59	□□□□□ -1.67
GABRB3-222	ENST00000637226	KIFC2	Q96AC6	838 aa		4.59	□□□□□ -1.67
GABRB3-222	ENST00000637226	TRIM47	Q96LD4	638 aa		4.59	□□□□□ -1.67
GABRB3-222	ENST00000637226	WNT7B	P56706	349 aa		4.58	□□□□□ -1.68
GABRB3-222	ENST00000637226	USP46	P62068	366 aa		4.58	□□□□□ -1.68
GABRB3-222	ENST00000637226	ALDH1A1	P00352	501 aa		4.57	□□□□□ -1.68
GABRB3-222	ENST00000637226	SKOR1	P84550	965 aa		4.57	□□□□□ -1.68
GABRB3-222	ENST00000637226	MDM2	Q00987	491 aa	Predicted RBP	4.57	□□□□□ -1.68
GABRB3-222	ENST00000637226	MAP2K5	Q13163	448 aa		4.57	□□□□□ -1.68
GABRB3-222	ENST00000637226	SLC16A10	Q8TF71	515 aa		4.57	□□□□□ -1.68
GABRB3-222	ENST00000637226	TULP1	O00294	542 aa	Predicted RBP	4.56	□□□□□ -1.68
GABRB3-222	ENST00000637226	PLCB2	Q00722	1185 aa		4.56	□□□□□ -1.68
GABRB3-222	ENST00000637226	HLA-C	Q95604	372 aa		4.56	□□□□□ -1.68
GABRB3-222	ENST00000637226	IRF6	O14896	467 aa		4.55	□□□□□ -1.68
GABRB3-222	ENST00000637226	HOXA2	O43364	376 aa		4.55	□□□□□ -1.68
GABRB3-222	ENST00000637226	JUND	P17535	347 aa		4.55	□□□□□ -1.68
GABRB3-222	ENST00000637226	GUCA2A	Q02747	115 aa		4.55	□□□□□ -1.68
GABRB3-222	ENST00000637226	NUTM1	Q86Y26	1132 aa		4.55	□□□□□ -1.68
GABRB3-222	ENST00000637226	WASF2	Q9Y6W5	498 aa		4.55	□□□□□ -1.68
GABRB3-222	ENST00000637226	MINK1	Q8N4C8	1332 aa	Predicted RBP	4.54	□□□□□ -1.68
GABRB3-222	ENST00000637226	FAM181B	A6NEQ2	426 aa		4.54	□□□□□ -1.68
GABRB3-222	ENST00000637226	KRI1	Q8N9T8	703 aa	Known RBP	4.54	□□□□□ -1.68
GABRB3-222	ENST00000637226	EHBP1	Q8NDI1	1231 aa		4.54	□□□□□ -1.68
GABRB3-222	ENST00000637226	SYMPK	Q92797	1274 aa	Known RBP	4.54	□□□□□ -1.68
GABRB3-222	ENST00000637226	NUDT12	Q9BQG2	462 aa		4.54	□□□□□ -1.68
GABRB3-222	ENST00000637226	CAPN5	O15484	640 aa	Predicted RBP	4.53	□□□□□ -1.68
GABRB3-222	ENST00000637226	CLCN1	P35523	988 aa		4.53	□□□□□ -1.68
GABRB3-222	ENST00000637226	LCE2C	Q5TA81	110 aa		4.53	□□□□□ -1.68
GABRB3-222	ENST00000637226	RETREG3	Q86VR2	466 aa		4.53	□□□□□ -1.68
GABRB3-222	ENST00000637226	GPCPD1	Q9NPB8	672 aa		4.53	□□□□□ -1.68
GABRB3-222	ENST00000637226	NXF1	Q9UBU9	619 aa	Known RBP	4.53	□□□□□ -1.68
GABRB3-222	ENST00000637226	SIAH2	O43255	324 aa		4.52	□□□□□ -1.69
GABRB3-222	ENST00000637226	HAP1	P54257	671 aa	Predicted RBP	4.52	□□□□□ -1.69
GABRB3-222	ENST00000637226	PTCRA	Q6ISU1	281 aa	Predicted RBP	4.52	□□□□□ -1.69
GABRB3-222	ENST00000637226	C6orf229	H3BNL8	230 aa		4.51	□□□□□ -1.69
GABRB3-222	ENST00000637226	FDX1	P10109	184 aa		4.51	□□□□□ -1.69
GABRB3-222	ENST00000637226	BMP1	P13497	986 aa		4.51	□□□□□ -1.69
GABRB3-222	ENST00000637226	IRF7	Q92985	503 aa		4.51	□□□□□ -1.69
GABRB3-222	ENST00000637226	CCDC102A	Q96A19	550 aa		4.51	□□□□□ -1.69
GABRB3-222	ENST00000637226	FAM217B	Q9NTX9	383 aa	Predicted RBP	4.51	□□□□□ -1.69
GABRB3-222	ENST00000637226	CCNYL3	P0C7X3	344 aa		4.5	□□□□□ -1.69
GABRB3-222	ENST00000637226	MS4A1	P11836	297 aa		4.5	□□□□□ -1.69
GABRB3-222	ENST00000637226	GMPR	P36959	345 aa		4.5	□□□□□ -1.69
GABRB3-222	ENST00000637226	SH3BP2	P78314	561 aa		4.5	□□□□□ -1.69
GABRB3-222	ENST00000637226	TRIM46	Q7Z4K8	759 aa		4.5	□□□□□ -1.69
GABRB3-222	ENST00000637226	NPAS3	Q8IXF0	933 aa		4.5	□□□□□ -1.69
GABRB3-222	ENST00000637226	PLEKHG3	A1L390	1219 aa		4.49	□□□□□ -1.69
GABRB3-222	ENST00000637226	VEGFB	P49765	207 aa		4.49	□□□□□ -1.69
GABRB3-222	ENST00000637226	LINC01559	Q495D7	138 aa		4.49	□□□□□ -1.69
GABRB3-222	ENST00000637226	ZSCAN1	Q8NBB4	408 aa		4.49	□□□□□ -1.69
GABRB3-222	ENST00000637226	BAP1	Q92560	729 aa		4.49	□□□□□ -1.69
GABRB3-222	ENST00000637226	EVA1B	Q9NVM1	165 aa		4.49	□□□□□ -1.69
GABRB3-222	ENST00000637226	PTPRN	Q16849	979 aa		4.48	□□□□□ -1.69
GABRB3-222	ENST00000637226	ZFP42	Q96MM3	310 aa		4.48	□□□□□ -1.69
GABRB3-222	ENST00000637226	UNC93B1	Q9H1C4	597 aa		4.48	□□□□□ -1.69
GABRB3-222	ENST00000637226	PCDHGC3	Q9UN70	934 aa		4.48	□□□□□ -1.69
GABRB3-222	ENST00000637226		H3BM21	787 aa		4.47	□□□□□ -1.69
GABRB3-222	ENST00000637226	VARS	P26640	1264 aa	Known RBP	4.47	□□□□□ -1.69
GABRB3-222	ENST00000637226	SSTR3	P32745	418 aa	Predicted RBP	4.47	□□□□□ -1.69
GABRB3-222	ENST00000637226	KCNH2	Q12809	1159 aa		4.47	□□□□□ -1.69
GABRB3-222	ENST00000637226	SCARF1	Q14162	830 aa		4.47	□□□□□ -1.69
GABRB3-222	ENST00000637226	SPIRE2	Q8WWL2	714 aa		4.47	□□□□□ -1.69
GABRB3-222	ENST00000637226	KDM2A	Q9Y2K7	1162 aa		4.47	□□□□□ -1.69
GABRB3-222	ENST00000637226	TLL2	Q9Y6L7	1015 aa		4.47	□□□□□ -1.69
GABRB3-222	ENST00000637226	NDUFV2	P19404	249 aa		4.46	□□□□□ -1.7
GABRB3-222	ENST00000637226	NNT	Q13423	1086 aa		4.46	□□□□□ -1.7
GABRB3-222	ENST00000637226	MRPL14	Q6P1L8	145 aa	Known RBP	4.46	□□□□□ -1.7
GABRB3-222	ENST00000637226	ZNF511	Q8NB15	262 aa		4.46	□□□□□ -1.7
GABRB3-222	ENST00000637226	PRR7	Q8TB68	274 aa		4.46	□□□□□ -1.7
GABRB3-222	ENST00000637226	MOXD2P	A6NHM9	499 aa		4.45	□□□□□ -1.7
GABRB3-222	ENST00000637226	SPDYE5	A6NIY4	337 aa		4.45	□□□□□ -1.7
GABRB3-222	ENST00000637226	CTH	P32929	405 aa		4.45	□□□□□ -1.7
GABRB3-222	ENST00000637226	WDR4	P57081	412 aa	Known RBP	4.45	□□□□□ -1.7

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