RNA–Protein interactions for RNA: ENST00000637078.1

CACNA1D-221, Transcript of calcium voltage-gated channel subunit alpha1 D, humanhuman

TSL 4

Gene CACNA1D, Length 575 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1D-221ENST00000637078 MYOM2P54296 1465 aa13.54□□□□□ -0.24
CACNA1D-221ENST00000637078 VGFO15240 615 aaPredicted RBP13.53□□□□□ -0.24
CACNA1D-221ENST00000637078 FNBP4Q8N3X1 1017 aaPredicted RBP13.53□□□□□ -0.24
CACNA1D-221ENST00000637078 ZRANB1Q9UGI0 708 aa13.52□□□□□ -0.25
CACNA1D-221ENST00000637078 NPHP3Q7Z494 1330 aa13.52□□□□□ -0.25
CACNA1D-221ENST00000637078 PXDNQ92626 1479 aa13.5□□□□□ -0.25
CACNA1D-221ENST00000637078 RPGRIP1LQ68CZ1 1315 aa13.49□□□□□ -0.25
CACNA1D-221ENST00000637078 CCDC125Q86Z20 511 aa13.49□□□□□ -0.25
CACNA1D-221ENST00000637078 BCL9LQ86UU0 1499 aa13.48□□□□□ -0.25
CACNA1D-221ENST00000637078 KNDC1Q76NI1 1749 aa13.48□□□□□ -0.25
CACNA1D-221ENST00000637078 KIF1AQ12756 1690 aa13.48□□□□□ -0.25
CACNA1D-221ENST00000637078 ESCO1Q5FWF5 840 aa13.48□□□□□ -0.25
CACNA1D-221ENST00000637078 NAIPQ13075 1403 aa13.47□□□□□ -0.25
CACNA1D-221ENST00000637078 LRPPRCP42704 1394 aaKnown RBP13.47□□□□□ -0.25
CACNA1D-221ENST00000637078 BRWD3Q6RI45 1802 aa13.46□□□□□ -0.25
CACNA1D-221ENST00000637078 GJD4Q96KN9 370 aaPredicted RBP13.46□□□□□ -0.25
CACNA1D-221ENST00000637078 FMN2Q9NZ56 1722 aa13.46□□□□□ -0.25
CACNA1D-221ENST00000637078 USP32Q8NFA0 1604 aa13.46□□□□□ -0.26
CACNA1D-221ENST00000637078 GLI3P10071 1580 aa13.45□□□□□ -0.26
CACNA1D-221ENST00000637078 IFT172Q9UG01 1749 aa13.45□□□□□ -0.26
CACNA1D-221ENST00000637078 BLMP54132 1417 aaPredicted RBP13.44□□□□□ -0.26
CACNA1D-221ENST00000637078 RRBP1Q9P2E9 1410 aaKnown RBP13.44□□□□□ -0.26
CACNA1D-221ENST00000637078 SLIT2O94813 1529 aa13.44□□□□□ -0.26
CACNA1D-221ENST00000637078 RALGAPBQ86X10 1494 aa13.43□□□□□ -0.26
CACNA1D-221ENST00000637078 TECPR2O15040 1411 aa13.43□□□□□ -0.26
CACNA1D-221ENST00000637078 FOXO3O43524 673 aa13.43□□□□□ -0.26
CACNA1D-221ENST00000637078 XPCQ01831 940 aaPredicted RBP13.43□□□□□ -0.26
CACNA1D-221ENST00000637078 NWD2Q9ULI1 1742 aa13.42□□□□□ -0.26
CACNA1D-221ENST00000637078 CCDC144AA2RUR9 1427 aa13.42□□□□□ -0.26
CACNA1D-221ENST00000637078 EP400Q96L91 3159 aa13.42□□□□□ -0.26
CACNA1D-221ENST00000637078 PLCH1Q4KWH8 1693 aa13.42□□□□□ -0.26
CACNA1D-221ENST00000637078 PPARGC1BQ86YN6 1023 aaKnown RBP13.41□□□□□ -0.26
CACNA1D-221ENST00000637078 UNC5CLQ8IV45 518 aa13.41□□□□□ -0.26
CACNA1D-221ENST00000637078 LRP5O75197 1615 aa13.41□□□□□ -0.26
CACNA1D-221ENST00000637078 ABCA3Q99758 1704 aa13.41□□□□□ -0.26
CACNA1D-221ENST00000637078 RGPD8O14715 1765 aaPredicted RBP13.4□□□□□ -0.26
CACNA1D-221ENST00000637078 SLC4A1APQ9BWU0 796 aaKnown RBP13.4□□□□□ -0.26
CACNA1D-221ENST00000637078 NUTM2FA1L443 756 aa13.39□□□□□ -0.27
CACNA1D-221ENST00000637078 SF3B2Q13435 895 aaKnown RBP13.39□□□□□ -0.27
CACNA1D-221ENST00000637078 SPATA31A3Q5VYP0 1347 aa13.39□□□□□ -0.27
CACNA1D-221ENST00000637078 TNS3Q68CZ2 1445 aa13.38□□□□□ -0.27
CACNA1D-221ENST00000637078 ADGRF5Q8IZF2 1346 aa13.38□□□□□ -0.27
CACNA1D-221ENST00000637078 ABCC11Q96J66 1382 aa13.37□□□□□ -0.27
CACNA1D-221ENST00000637078 ANKRD30BQ9BXX2 1392 aa13.37□□□□□ -0.27
CACNA1D-221ENST00000637078 HAP1P54257 671 aaPredicted RBP13.37□□□□□ -0.27
CACNA1D-221ENST00000637078 WAPLQ7Z5K2 1190 aa13.37□□□□□ -0.27
CACNA1D-221ENST00000637078 STK26Q9P289 416 aa13.37□□□□□ -0.27
CACNA1D-221ENST00000637078 SRCAPQ6ZRS2 3230 aa13.37□□□□□ -0.27
CACNA1D-221ENST00000637078 PLEKHH1Q9ULM0 1364 aa13.36□□□□□ -0.27
CACNA1D-221ENST00000637078 PIK3C2GO75747 1445 aa13.36□□□□□ -0.27
CACNA1D-221ENST00000637078 KRT28Q7Z3Y7 464 aa13.35□□□□□ -0.27
CACNA1D-221ENST00000637078 DEFB132Q7Z7B7 95 aa13.35□□□□□ -0.27
CACNA1D-221ENST00000637078 YTHDC2Q9H6S0 1430 aaKnown RBP13.35□□□□□ -0.27
CACNA1D-221ENST00000637078 NRAPQ86VF7 1730 aa13.34□□□□□ -0.27
CACNA1D-221ENST00000637078 SPATA31E1Q6ZUB1 1445 aa13.34□□□□□ -0.27
CACNA1D-221ENST00000637078 VPS72Q15906 364 aa13.34□□□□□ -0.27
CACNA1D-221ENST00000637078 SEPT12Q8IYM1 358 aa13.34□□□□□ -0.27
CACNA1D-221ENST00000637078 RGPD1P0DJD0 1748 aa13.33□□□□□ -0.27
CACNA1D-221ENST00000637078 PSME1Q06323 249 aa13.33□□□□□ -0.28
CACNA1D-221ENST00000637078 RGL3Q3MIN7 710 aa13.33□□□□□ -0.28
CACNA1D-221ENST00000637078 CCDC9Q9Y3X0 531 aaKnown RBP13.33□□□□□ -0.28
CACNA1D-221ENST00000637078 NRXN1Q9ULB1 1477 aa13.33□□□□□ -0.28
CACNA1D-221ENST00000637078 SBNO1A3KN83 1393 aa13.32□□□□□ -0.28
CACNA1D-221ENST00000637078 ARHGEF10O15013 1369 aa13.32□□□□□ -0.28
CACNA1D-221ENST00000637078 TMEM132EQ6IEE7 984 aa13.32□□□□□ -0.28
CACNA1D-221ENST00000637078 PHF8Q9UPP1 1060 aa13.32□□□□□ -0.28
CACNA1D-221ENST00000637078 KRT27Q7Z3Y8 459 aa13.31□□□□□ -0.28
CACNA1D-221ENST00000637078 BAG6P46379 1132 aa13.3□□□□□ -0.28
CACNA1D-221ENST00000637078 SIRT1Q96EB6 747 aa13.3□□□□□ -0.28
CACNA1D-221ENST00000637078 TRPM3Q9HCF6 1732 aaPredicted RBP13.3□□□□□ -0.28
CACNA1D-221ENST00000637078 COL14A1Q05707 1796 aaKnown RBP13.3□□□□□ -0.28
CACNA1D-221ENST00000637078 ADGRB2O60241 1585 aa13.29□□□□□ -0.28
CACNA1D-221ENST00000637078 A0A0G2JS52 829 aa13.29□□□□□ -0.28
CACNA1D-221ENST00000637078 ONECUT3O60422 494 aaPredicted RBP13.29□□□□□ -0.28
CACNA1D-221ENST00000637078 MYT1Q01538 1121 aa13.29□□□□□ -0.28
CACNA1D-221ENST00000637078 LMOD2Q6P5Q4 547 aa13.29□□□□□ -0.28
CACNA1D-221ENST00000637078 CABLES1Q8TDN4 633 aa13.29□□□□□ -0.28
CACNA1D-221ENST00000637078 ALS2Q96Q42 1657 aa13.28□□□□□ -0.28
CACNA1D-221ENST00000637078 PLEKHG5O94827 1062 aa13.28□□□□□ -0.28
CACNA1D-221ENST00000637078 DHX57Q6P158 1386 aaKnown RBP13.28□□□□□ -0.28
CACNA1D-221ENST00000637078 ANKARQ7Z5J8 1434 aa13.28□□□□□ -0.28
CACNA1D-221ENST00000637078 DLC1Q96QB1 1528 aa13.27□□□□□ -0.29
CACNA1D-221ENST00000637078 TNS1Q9HBL0 1735 aaKnown RBP13.27□□□□□ -0.29
CACNA1D-221ENST00000637078 CRYBG1Q9Y4K1 1723 aa13.26□□□□□ -0.29
CACNA1D-221ENST00000637078 PSDA5PKW4 1024 aaPredicted RBP13.25□□□□□ -0.29
CACNA1D-221ENST00000637078 C14orf93Q9H972 538 aaKnown RBP13.25□□□□□ -0.29
CACNA1D-221ENST00000637078 THSD7AQ9UPZ6 1657 aa13.24□□□□□ -0.29
CACNA1D-221ENST00000637078 FAM83GA6ND36 823 aa13.24□□□□□ -0.29
CACNA1D-221ENST00000637078 HRCP23327 699 aa13.24□□□□□ -0.29
CACNA1D-221ENST00000637078 FAM98CQ17RN3 349 aaKnown RBP13.24□□□□□ -0.29
CACNA1D-221ENST00000637078 MPHOSPH9Q99550 1183 aa13.24□□□□□ -0.29
CACNA1D-221ENST00000637078 EIF3AQ14152 1382 aaKnown RBP13.23□□□□□ -0.29
CACNA1D-221ENST00000637078 SAFB2Q14151 953 aaKnown RBP eCLIP13.23□□□□□ -0.29
CACNA1D-221ENST00000637078 PMFBP1Q8TBY8 1022 aa13.23□□□□□ -0.29
CACNA1D-221ENST00000637078 PRAM1Q96QH2 718 aa13.23□□□□□ -0.29
CACNA1D-221ENST00000637078 BTG4Q9NY30 223 aa13.23□□□□□ -0.29
CACNA1D-221ENST00000637078 DISP2A7MBM2 1401 aa13.22□□□□□ -0.29
CACNA1D-221ENST00000637078 ITSN1Q15811 1721 aa13.22□□□□□ -0.29
CACNA1D-221ENST00000637078 GPRASP1Q5JY77 1395 aa13.22□□□□□ -0.29
CACNA1D-221ENST00000637078 CFAP70Q5T0N1 1121 aa13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms