RNA–Protein interactions for RNA: ENST00000636780.1

CLN5-216, Transcript of CLN5, intracellular trafficking protein, humanhuman

APPRIS ALT2 TSL 5

Gene CLN5, Length 2,683 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN5-216ENST00000636780 WAPLQ7Z5K2 1190 aa24.74■■□□□ 1.55
CLN5-216ENST00000636780 BCL2L13Q9BXK5 485 aa24.74■■□□□ 1.55
CLN5-216ENST00000636780 POGKQ9P215 609 aa24.74■■□□□ 1.55
CLN5-216ENST00000636780 WWC1Q8IX03 1113 aa24.74■■□□□ 1.55
CLN5-216ENST00000636780 QRICH2Q9H0J4 1663 aa24.74■■□□□ 1.55
CLN5-216ENST00000636780 NEURL4Q96JN8 1562 aa24.73■■□□□ 1.55
CLN5-216ENST00000636780 TCP11L2Q8N4U5 519 aa24.73■■□□□ 1.55
CLN5-216ENST00000636780 SBNO2Q9Y2G9 1366 aa24.72■■□□□ 1.55
CLN5-216ENST00000636780 NEXMIFQ5QGS0 1516 aa24.71■■□□□ 1.55
CLN5-216ENST00000636780 TNNQ9UQP3 1299 aa24.71■■□□□ 1.55
CLN5-216ENST00000636780 SLC24A1O60721 1099 aa24.7■■□□□ 1.55
CLN5-216ENST00000636780 SLC52A1Q9NWF4 448 aa24.7■■□□□ 1.55
CLN5-216ENST00000636780 GLI2P10070 1586 aa24.7■■□□□ 1.54
CLN5-216ENST00000636780 RICTORQ6R327 1708 aa24.7■■□□□ 1.54
CLN5-216ENST00000636780 PDE4AP27815 886 aa24.7■■□□□ 1.54
CLN5-216ENST00000636780 CGNL1Q0VF96 1302 aa24.7■■□□□ 1.54
CLN5-216ENST00000636780 U2AF1L5P0DN76 240 aaPredicted RBP24.69■■□□□ 1.54
CLN5-216ENST00000636780 U2AF1Q01081 240 aaKnown RBP eCLIP24.69■■□□□ 1.54
CLN5-216ENST00000636780 PLPPR3Q6T4P5 718 aa24.69■■□□□ 1.54
CLN5-216ENST00000636780 TRMT2AQ8IZ69 625 aaKnown RBP24.69■■□□□ 1.54
CLN5-216ENST00000636780 INSRP06213 1382 aa24.69■■□□□ 1.54
CLN5-216ENST00000636780 TULP4Q9NRJ4 1543 aa24.69■■□□□ 1.54
CLN5-216ENST00000636780 FRAT1Q92837 279 aaPredicted RBP24.69■■□□□ 1.54
CLN5-216ENST00000636780 MYO5BQ9ULV0 1848 aa24.68■■□□□ 1.54
CLN5-216ENST00000636780 U2SURPO15042 1029 aaKnown RBP24.68■■□□□ 1.54
CLN5-216ENST00000636780 SETBP1Q9Y6X0 1596 aa24.68■■□□□ 1.54
CLN5-216ENST00000636780 PIK3C2BO00750 1634 aa24.67■■□□□ 1.54
CLN5-216ENST00000636780 NBR1Q14596 966 aa24.67■■□□□ 1.54
CLN5-216ENST00000636780 PANK1Q8TE04 598 aa24.67■■□□□ 1.54
CLN5-216ENST00000636780 SUGP2Q8IX01 1082 aaKnown RBP eCLIP24.66■■□□□ 1.54
CLN5-216ENST00000636780 A0A1W2PP64 1363 aa24.65■■□□□ 1.54
CLN5-216ENST00000636780 CABP1Q9NZU7 370 aa24.65■■□□□ 1.54
CLN5-216ENST00000636780 PPM1GO15355 546 aaPredicted RBP24.65■■□□□ 1.54
CLN5-216ENST00000636780 MYO3AQ8NEV4 1616 aa24.65■■□□□ 1.54
CLN5-216ENST00000636780 POLR3AO14802 1390 aaPredicted RBP24.64■■□□□ 1.54
CLN5-216ENST00000636780 E9PSI1 815 aa24.64■■□□□ 1.53
CLN5-216ENST00000636780 NCKAP5LQ9HCH0 1330 aa24.63■■□□□ 1.53
CLN5-216ENST00000636780 RGS3P49796 1198 aa24.63■■□□□ 1.53
CLN5-216ENST00000636780 CDK19Q9BWU1 502 aa24.63■■□□□ 1.53
CLN5-216ENST00000636780 COG6Q9Y2V7 657 aa24.62■■□□□ 1.53
CLN5-216ENST00000636780 NOP58Q9Y2X3 529 aaKnown RBP24.62■■□□□ 1.53
CLN5-216ENST00000636780 RUNDC1Q96C34 613 aa24.62■■□□□ 1.53
CLN5-216ENST00000636780 PRKCSHP14314 528 aaPredicted RBP24.61■■□□□ 1.53
CLN5-216ENST00000636780 FYB1O15117 783 aa24.61■■□□□ 1.53
CLN5-216ENST00000636780 ANP32AP39687 249 aaKnown RBP24.61■■□□□ 1.53
CLN5-216ENST00000636780 CLUAP1Q96AJ1 413 aa24.61■■□□□ 1.53
CLN5-216ENST00000636780 TCERG1O14776 1098 aaKnown RBP24.6■■□□□ 1.53
CLN5-216ENST00000636780 NKTRP30414 1462 aaKnown RBP24.59■■□□□ 1.53
CLN5-216ENST00000636780 ANKRD36BQ8N2N9 1353 aa24.59■■□□□ 1.53
CLN5-216ENST00000636780 CANXP27824 592 aaKnown RBP24.59■■□□□ 1.53
CLN5-216ENST00000636780 TSR2Q969E8 191 aaKnown RBP24.59■■□□□ 1.53
CLN5-216ENST00000636780 BACH2Q9BYV9 841 aa24.59■■□□□ 1.53
CLN5-216ENST00000636780 ARHGAP31Q2M1Z3 1444 aa24.59■■□□□ 1.53
CLN5-216ENST00000636780 ZC3H13Q5T200 1668 aaKnown RBP24.58■■□□□ 1.53
CLN5-216ENST00000636780 ARHGEF28Q8N1W1 1705 aaKnown RBP24.58■■□□□ 1.53
CLN5-216ENST00000636780 RIMBP3CA6NJZ7 1639 aa24.58■■□□□ 1.53
CLN5-216ENST00000636780 RIMBP3BA6NNM3 1639 aa24.58■■□□□ 1.53
CLN5-216ENST00000636780 RIMBP3Q9UFD9 1639 aa24.58■■□□□ 1.53
CLN5-216ENST00000636780 IGHDP01880 384 aa24.57■■□□□ 1.52
CLN5-216ENST00000636780 IPO9Q96P70 1041 aaKnown RBP24.57■■□□□ 1.52
CLN5-216ENST00000636780 KDM2BQ8NHM5 1336 aa24.57■■□□□ 1.52
CLN5-216ENST00000636780 YTHDC2Q9H6S0 1430 aaKnown RBP24.56■■□□□ 1.52
CLN5-216ENST00000636780 CFAP53Q96M91 514 aa24.56■■□□□ 1.52
CLN5-216ENST00000636780 ZRANB1Q9UGI0 708 aa24.56■■□□□ 1.52
CLN5-216ENST00000636780 TXNDC2Q86VQ3 553 aa24.55■■□□□ 1.52
CLN5-216ENST00000636780 GOLGA6L2Q8N9W4 650 aaPredicted RBP24.55■■□□□ 1.52
CLN5-216ENST00000636780 NUTM2FA1L443 756 aa24.54■■□□□ 1.52
CLN5-216ENST00000636780 RLBP1P12271 317 aa24.54■■□□□ 1.52
CLN5-216ENST00000636780 TMEM131LA2VDJ0 1609 aa24.54■■□□□ 1.52
CLN5-216ENST00000636780 PREX1Q8TCU6 1659 aa24.53■■□□□ 1.52
CLN5-216ENST00000636780 PTPRMP28827 1452 aa24.53■■□□□ 1.52
CLN5-216ENST00000636780 SHPRHQ149N8 1683 aa24.53■■□□□ 1.52
CLN5-216ENST00000636780 ZBTB47Q9UFB7 747 aaPredicted RBP24.51■■□□□ 1.51
CLN5-216ENST00000636780 SLC4A3P48751 1232 aa24.5■■□□□ 1.51
CLN5-216ENST00000636780 RARSP54136 660 aaKnown RBP24.49■■□□□ 1.51
CLN5-216ENST00000636780 DIP2BQ9P265 1576 aa24.49■■□□□ 1.51
CLN5-216ENST00000636780 TERF2IPQ9NYB0 399 aa24.48■■□□□ 1.51
CLN5-216ENST00000636780 CEBPAP49715 358 aaPredicted RBP24.47■■□□□ 1.51
CLN5-216ENST00000636780 CENPQQ7L2Z9 268 aaPredicted RBP24.47■■□□□ 1.51
CLN5-216ENST00000636780 CD163L1Q9NR16 1453 aa24.46■■□□□ 1.51
CLN5-216ENST00000636780 ESF1Q9H501 851 aaKnown RBP24.46■■□□□ 1.51
CLN5-216ENST00000636780 LAS1LQ9Y4W2 734 aaKnown RBP24.46■■□□□ 1.51
CLN5-216ENST00000636780 ABCC11Q96J66 1382 aa24.45■■□□□ 1.51
CLN5-216ENST00000636780 ALKQ9UM73 1620 aa24.45■■□□□ 1.51
CLN5-216ENST00000636780 HMOX1P09601 288 aa24.45■■□□□ 1.5
CLN5-216ENST00000636780 METP08581 1390 aa24.44■■□□□ 1.5
CLN5-216ENST00000636780 HDGFL2Q7Z4V5 671 aaPredicted RBP24.44■■□□□ 1.5
CLN5-216ENST00000636780 PHF23Q9BUL5 403 aaPredicted RBP24.44■■□□□ 1.5
CLN5-216ENST00000636780 ZFYVE9O95405 1425 aa24.44■■□□□ 1.5
CLN5-216ENST00000636780 CLTCQ00610 1675 aaKnown RBP24.43■■□□□ 1.5
CLN5-216ENST00000636780 NME9Q86XW9 330 aa24.43■■□□□ 1.5
CLN5-216ENST00000636780 PLEKHF1Q96S99 279 aa24.43■■□□□ 1.5
CLN5-216ENST00000636780 THUMPD2Q9BTF0 503 aaKnown RBP24.42■■□□□ 1.5
CLN5-216ENST00000636780 TRIM35Q9UPQ4 493 aa24.42■■□□□ 1.5
CLN5-216ENST00000636780 RIMS2Q9UQ26 1411 aa24.42■■□□□ 1.5
CLN5-216ENST00000636780 MS4A1P11836 297 aa24.42■■□□□ 1.5
CLN5-216ENST00000636780 TMPOP42166 694 aaKnown RBP24.42■■□□□ 1.5
CLN5-216ENST00000636780 EXOSC9Q06265 439 aaKnown RBP24.42■■□□□ 1.5
CLN5-216ENST00000636780 EMILIN1Q9Y6C2 1016 aa24.42■■□□□ 1.5
CLN5-216ENST00000636780 A2ML1A8K2U0 1454 aa24.41■■□□□ 1.5
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms