RNA–Protein interactions for RNA: ENST00000636709.1

CHRNA7-219, Transcript of cholinergic receptor nicotinic alpha 7 subunit, humanhuman

Gene CHRNA7, Length 7,722 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA7-219ENST00000636709 ZNF219Q9P2Y4 722 aaPredicted RBP10.79□□□□□ -0.68
CHRNA7-219ENST00000636709 MPHOSPH10O00566 681 aaKnown RBP10.78□□□□□ -0.68
CHRNA7-219ENST00000636709 GPRASP1Q5JY77 1395 aa10.78□□□□□ -0.68
CHRNA7-219ENST00000636709 ATP2B1P20020 1258 aa10.78□□□□□ -0.68
CHRNA7-219ENST00000636709 FAM161AQ3B820 660 aa10.78□□□□□ -0.68
CHRNA7-219ENST00000636709 VPS37CA5D8V6 355 aaPredicted RBP10.78□□□□□ -0.68
CHRNA7-219ENST00000636709 SAFBQ15424 915 aaKnown RBP eCLIP10.78□□□□□ -0.68
CHRNA7-219ENST00000636709 TMEM132EQ6IEE7 984 aa10.77□□□□□ -0.68
CHRNA7-219ENST00000636709 MATR3P43243 847 aaKnown RBP eCLIP10.77□□□□□ -0.68
CHRNA7-219ENST00000636709 TTLL5Q6EMB2 1281 aa10.77□□□□□ -0.68
CHRNA7-219ENST00000636709 TXNDC2Q86VQ3 553 aa10.77□□□□□ -0.68
CHRNA7-219ENST00000636709 COG6Q9Y2V7 657 aa10.77□□□□□ -0.68
CHRNA7-219ENST00000636709 DEKP35659 375 aaKnown RBP10.77□□□□□ -0.69
CHRNA7-219ENST00000636709 BRMS1Q9HCU9 246 aa10.77□□□□□ -0.69
CHRNA7-219ENST00000636709 ZKSCAN2Q63HK3 967 aa10.77□□□□□ -0.69
CHRNA7-219ENST00000636709 HOOK1Q9UJC3 728 aaKnown RBP10.77□□□□□ -0.69
CHRNA7-219ENST00000636709 MYL6BP14649 208 aa10.76□□□□□ -0.69
CHRNA7-219ENST00000636709 CDK5RAP3Q96JB5 506 aa10.76□□□□□ -0.69
CHRNA7-219ENST00000636709 CABP4P57796 275 aa10.76□□□□□ -0.69
CHRNA7-219ENST00000636709 GGNBP2Q9H3C7 697 aa10.76□□□□□ -0.69
CHRNA7-219ENST00000636709 KRT18P05783 430 aaKnown RBP10.76□□□□□ -0.69
CHRNA7-219ENST00000636709 CCDC97Q96F63 343 aaPredicted RBP10.75□□□□□ -0.69
CHRNA7-219ENST00000636709 ZHX3Q9H4I2 956 aa10.75□□□□□ -0.69
CHRNA7-219ENST00000636709 ADAMTS2O95450 1211 aa10.75□□□□□ -0.69
CHRNA7-219ENST00000636709 TTC39AQ5SRH9 613 aa10.75□□□□□ -0.69
CHRNA7-219ENST00000636709 RSPH4AQ5TD94 716 aa10.75□□□□□ -0.69
CHRNA7-219ENST00000636709 RNF20Q5VTR2 975 aa10.75□□□□□ -0.69
CHRNA7-219ENST00000636709 TBC1D2BQ9UPU7 963 aa10.75□□□□□ -0.69
CHRNA7-219ENST00000636709 OFD1O75665 1012 aa10.75□□□□□ -0.69
CHRNA7-219ENST00000636709 NLRP13Q86W25 1043 aa10.74□□□□□ -0.69
CHRNA7-219ENST00000636709 PLCD3Q8N3E9 789 aa10.74□□□□□ -0.69
CHRNA7-219ENST00000636709 CCDC88BA6NC98 1476 aa10.74□□□□□ -0.69
CHRNA7-219ENST00000636709 HOMER1Q86YM7 354 aa10.73□□□□□ -0.69
CHRNA7-219ENST00000636709 APAF1O14727 1248 aa10.73□□□□□ -0.69
CHRNA7-219ENST00000636709 TMEM87AQ8NBN3 555 aa10.73□□□□□ -0.69
CHRNA7-219ENST00000636709 SLC3A2P08195 630 aaKnown RBP10.73□□□□□ -0.69
CHRNA7-219ENST00000636709 WDR78Q5VTH9 848 aa10.73□□□□□ -0.69
CHRNA7-219ENST00000636709 DDX49Q9Y6V7 483 aaKnown RBP10.73□□□□□ -0.69
CHRNA7-219ENST00000636709 KIF15Q9NS87 1388 aa10.73□□□□□ -0.69
CHRNA7-219ENST00000636709 PIBF1Q8WXW3 757 aa10.73□□□□□ -0.69
CHRNA7-219ENST00000636709 ATP6V1DQ9Y5K8 247 aa10.73□□□□□ -0.69
CHRNA7-219ENST00000636709 SMG6Q86US8 1419 aaKnown RBP10.73□□□□□ -0.69
CHRNA7-219ENST00000636709 PDILTQ8N807 584 aa10.72□□□□□ -0.69
CHRNA7-219ENST00000636709 UBTFL1P0CB47 393 aaPredicted RBP10.72□□□□□ -0.69
CHRNA7-219ENST00000636709 SIL1Q9H173 461 aa10.72□□□□□ -0.69
CHRNA7-219ENST00000636709 TATP17735 454 aaPredicted RBP10.72□□□□□ -0.69
CHRNA7-219ENST00000636709 CCDC85AQ96PX6 553 aaPredicted RBP10.72□□□□□ -0.69
CHRNA7-219ENST00000636709 CCER2I3L3R5 266 aa10.72□□□□□ -0.69
CHRNA7-219ENST00000636709 XBP1P17861 261 aa10.72□□□□□ -0.69
CHRNA7-219ENST00000636709 FSD1Q9BTV5 496 aa10.72□□□□□ -0.69
CHRNA7-219ENST00000636709 SETQ01105 290 aaPredicted RBP10.72□□□□□ -0.69
CHRNA7-219ENST00000636709 ECM2O94769 699 aaPredicted RBP10.71□□□□□ -0.69
CHRNA7-219ENST00000636709 CA8P35219 290 aa10.71□□□□□ -0.69
CHRNA7-219ENST00000636709 KAT6BQ8WYB5 2073 aa10.71□□□□□ -0.7
CHRNA7-219ENST00000636709 ERC2O15083 957 aa10.71□□□□□ -0.7
CHRNA7-219ENST00000636709 BRPF1P55201 1214 aaPredicted RBP10.71□□□□□ -0.7
CHRNA7-219ENST00000636709 CRBNQ96SW2 442 aa10.71□□□□□ -0.7
CHRNA7-219ENST00000636709 SYCP1Q15431 976 aa10.7□□□□□ -0.7
CHRNA7-219ENST00000636709 GNL3LQ9NVN8 582 aaKnown RBP10.7□□□□□ -0.7
CHRNA7-219ENST00000636709 SMC3Q9UQE7 1217 aa10.7□□□□□ -0.7
CHRNA7-219ENST00000636709 SART3Q15020 963 aaKnown RBP10.7□□□□□ -0.7
CHRNA7-219ENST00000636709 MYBBP1AQ9BQG0 1328 aaKnown RBP10.7□□□□□ -0.7
CHRNA7-219ENST00000636709 DHX57Q6P158 1386 aaKnown RBP10.7□□□□□ -0.7
CHRNA7-219ENST00000636709 MPHOSPH8Q99549 860 aa10.7□□□□□ -0.7
CHRNA7-219ENST00000636709 E9PSI1 815 aa10.69□□□□□ -0.7
CHRNA7-219ENST00000636709 PLEKHO1Q53GL0 409 aaPredicted RBP10.69□□□□□ -0.7
CHRNA7-219ENST00000636709 PDCL3Q9H2J4 239 aa10.69□□□□□ -0.7
CHRNA7-219ENST00000636709 WWC3Q9ULE0 1092 aa10.69□□□□□ -0.7
CHRNA7-219ENST00000636709 RBM19Q9Y4C8 960 aaKnown RBP10.69□□□□□ -0.7
CHRNA7-219ENST00000636709 SCLT1Q96NL6 688 aa10.69□□□□□ -0.7
CHRNA7-219ENST00000636709 PRDM11Q9NQV5 511 aa10.69□□□□□ -0.7
CHRNA7-219ENST00000636709 MAP4K4O95819 1239 aaPredicted RBP10.69□□□□□ -0.7
CHRNA7-219ENST00000636709 WIZO95785 1651 aa10.69□□□□□ -0.7
CHRNA7-219ENST00000636709 REC8O95072 547 aa10.68□□□□□ -0.7
CHRNA7-219ENST00000636709 SASS6Q6UVJ0 657 aa10.68□□□□□ -0.7
CHRNA7-219ENST00000636709 CEBPZQ03701 1054 aaKnown RBP10.68□□□□□ -0.7
CHRNA7-219ENST00000636709 RUFY1Q96T51 708 aa10.68□□□□□ -0.7
CHRNA7-219ENST00000636709 ROCK1Q13464 1354 aa10.68□□□□□ -0.7
CHRNA7-219ENST00000636709 USP5P45974 858 aa10.68□□□□□ -0.7
CHRNA7-219ENST00000636709 CAGE1Q8TC20 777 aa10.67□□□□□ -0.7
CHRNA7-219ENST00000636709 LNPKQ9C0E8 428 aa10.67□□□□□ -0.7
CHRNA7-219ENST00000636709 NEBLO76041 1014 aa10.67□□□□□ -0.7
CHRNA7-219ENST00000636709 NUP133Q8WUM0 1156 aa10.67□□□□□ -0.7
CHRNA7-219ENST00000636709 ARHGAP5Q13017 1502 aa10.67□□□□□ -0.7
CHRNA7-219ENST00000636709 RAPGEF2Q9Y4G8 1499 aa10.67□□□□□ -0.7
CHRNA7-219ENST00000636709 ZC3H6P61129 1189 aaKnown RBP10.67□□□□□ -0.7
CHRNA7-219ENST00000636709 OLFM4Q6UX06 510 aa10.67□□□□□ -0.7
CHRNA7-219ENST00000636709 CCDC158Q5M9N0 1113 aa10.67□□□□□ -0.7
CHRNA7-219ENST00000636709 VPS8Q8N3P4 1428 aa10.67□□□□□ -0.7
CHRNA7-219ENST00000636709 MTHFSP49914 203 aa10.67□□□□□ -0.7
CHRNA7-219ENST00000636709 MIA2Q96PC5 1412 aa10.67□□□□□ -0.7
CHRNA7-219ENST00000636709 ZNF76P36508 570 aa10.66□□□□□ -0.7
CHRNA7-219ENST00000636709 API5Q9BZZ5 524 aaKnown RBP10.66□□□□□ -0.7
CHRNA7-219ENST00000636709 DZIP1LQ8IYY4 767 aaKnown RBP10.66□□□□□ -0.7
CHRNA7-219ENST00000636709 SLC26A8Q96RN1 970 aa10.66□□□□□ -0.7
CHRNA7-219ENST00000636709 FKBP4Q02790 459 aaKnown RBP eCLIP10.66□□□□□ -0.7
CHRNA7-219ENST00000636709 DDX19BQ9UMR2 479 aa10.66□□□□□ -0.7
CHRNA7-219ENST00000636709 ANKRD62A6NC57 917 aa10.66□□□□□ -0.7
CHRNA7-219ENST00000636709 WDHD1O75717 1129 aaPredicted RBP10.65□□□□□ -0.7
CHRNA7-219ENST00000636709 PHLDB1Q86UU1 1377 aa10.65□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms