RNA–Protein interactions for RNA: ENST00000636610.1

CACNA1A-228, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 3,011 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-228ENST00000636610 NPM1P06748 294 aaKnown RBP eCLIP18.02■□□□□ 0.48
CACNA1A-228ENST00000636610 KDM5AP29375 1690 aaKnown RBP18.01■□□□□ 0.47
CACNA1A-228ENST00000636610 MINK1Q8N4C8 1332 aaPredicted RBP18■□□□□ 0.47
CACNA1A-228ENST00000636610 CFAP53Q96M91 514 aa18■□□□□ 0.47
CACNA1A-228ENST00000636610 ANO8Q9HCE9 1232 aaPredicted RBP18■□□□□ 0.47
CACNA1A-228ENST00000636610 PDE3AQ14432 1141 aa18■□□□□ 0.47
CACNA1A-228ENST00000636610 C14orf93Q9H972 538 aaKnown RBP18■□□□□ 0.47
CACNA1A-228ENST00000636610 PDZRN3Q9UPQ7 1066 aa18■□□□□ 0.47
CACNA1A-228ENST00000636610 ABCA6Q8N139 1617 aa18■□□□□ 0.47
CACNA1A-228ENST00000636610 NPC1L1Q9UHC9 1359 aa17.99■□□□□ 0.47
CACNA1A-228ENST00000636610 FTSJ3Q8IY81 847 aaKnown RBP17.99■□□□□ 0.47
CACNA1A-228ENST00000636610 CEP152O94986 1710 aa17.99■□□□□ 0.47
CACNA1A-228ENST00000636610 ZBTB4Q9P1Z0 1013 aaPredicted RBP17.99■□□□□ 0.47
CACNA1A-228ENST00000636610 ASXL2Q76L83 1435 aa17.98■□□□□ 0.47
CACNA1A-228ENST00000636610 USP19O94966 1318 aa17.98■□□□□ 0.47
CACNA1A-228ENST00000636610 EXOSC9Q06265 439 aaKnown RBP17.96■□□□□ 0.47
CACNA1A-228ENST00000636610 SMC4Q9NTJ3 1288 aa17.96■□□□□ 0.47
CACNA1A-228ENST00000636610 TET3O43151 1660 aa17.96■□□□□ 0.47
CACNA1A-228ENST00000636610 POLR3AO14802 1390 aaPredicted RBP17.96■□□□□ 0.47
CACNA1A-228ENST00000636610 MAP3K4Q9Y6R4 1608 aa17.95■□□□□ 0.46
CACNA1A-228ENST00000636610 ITPRIPQ8IWB1 547 aa17.95■□□□□ 0.46
CACNA1A-228ENST00000636610 NPATQ14207 1427 aa17.94■□□□□ 0.46
CACNA1A-228ENST00000636610 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.94■□□□□ 0.46
CACNA1A-228ENST00000636610 UHRF1BP1LA0JNW5 1464 aa17.94■□□□□ 0.46
CACNA1A-228ENST00000636610 EVC2Q86UK5 1308 aa17.93■□□□□ 0.46
CACNA1A-228ENST00000636610 SLC24A1O60721 1099 aa17.93■□□□□ 0.46
CACNA1A-228ENST00000636610 IDI1Q13907 227 aa17.93■□□□□ 0.46
CACNA1A-228ENST00000636610 MROH2AA6NES4 1674 aa17.92■□□□□ 0.46
CACNA1A-228ENST00000636610 MFAP1P55081 439 aaKnown RBP17.92■□□□□ 0.46
CACNA1A-228ENST00000636610 POGKQ9P215 609 aa17.92■□□□□ 0.46
CACNA1A-228ENST00000636610 ELL2O00472 640 aaPredicted RBP17.92■□□□□ 0.46
CACNA1A-228ENST00000636610 PMFBP1Q8TBY8 1022 aa17.9■□□□□ 0.46
CACNA1A-228ENST00000636610 MYH16Q9H6N6 1097 aa17.9■□□□□ 0.46
CACNA1A-228ENST00000636610 SSH1Q8WYL5 1049 aa17.9■□□□□ 0.46
CACNA1A-228ENST00000636610 PRAM1Q96QH2 718 aa17.9■□□□□ 0.46
CACNA1A-228ENST00000636610 MAPK8IP3Q9UPT6 1336 aa17.9■□□□□ 0.46
CACNA1A-228ENST00000636610 DZIP1LQ8IYY4 767 aaKnown RBP17.9■□□□□ 0.46
CACNA1A-228ENST00000636610 THUMPD2Q9BTF0 503 aaKnown RBP17.9■□□□□ 0.46
CACNA1A-228ENST00000636610 PPRC1Q5VV67 1664 aaKnown RBP17.89■□□□□ 0.45
CACNA1A-228ENST00000636610 ZKSCAN2Q63HK3 967 aa17.89■□□□□ 0.45
CACNA1A-228ENST00000636610 RWDD1Q9H446 243 aaPredicted RBP17.89■□□□□ 0.45
CACNA1A-228ENST00000636610 UPF2Q9HAU5 1272 aaKnown RBP17.89■□□□□ 0.45
CACNA1A-228ENST00000636610 MROH1Q8NDA8 1641 aa17.89■□□□□ 0.45
CACNA1A-228ENST00000636610 CLASP1Q7Z460 1538 aa17.89■□□□□ 0.45
CACNA1A-228ENST00000636610 VGFO15240 615 aaPredicted RBP17.88■□□□□ 0.45
CACNA1A-228ENST00000636610 RIPK4P57078 832 aa17.88■□□□□ 0.45
CACNA1A-228ENST00000636610 WDR63Q8IWG1 891 aa17.88■□□□□ 0.45
CACNA1A-228ENST00000636610 TRIM27P14373 513 aa17.88■□□□□ 0.45
CACNA1A-228ENST00000636610 FBXO31Q5XUX0 539 aaPredicted RBP17.88■□□□□ 0.45
CACNA1A-228ENST00000636610 GZF1Q9H116 711 aaPredicted RBP17.88■□□□□ 0.45
CACNA1A-228ENST00000636610 MYOM2P54296 1465 aa17.88■□□□□ 0.45
CACNA1A-228ENST00000636610 KIF1BO60333 1816 aa17.88■□□□□ 0.45
CACNA1A-228ENST00000636610 INO80Q9ULG1 1556 aaPredicted RBP17.88■□□□□ 0.45
CACNA1A-228ENST00000636610 STAG3Q9UJ98 1225 aa17.88■□□□□ 0.45
CACNA1A-228ENST00000636610 NOB1Q9ULX3 412 aaKnown RBP17.88■□□□□ 0.45
CACNA1A-228ENST00000636610 EFCAB6Q5THR3 1501 aa17.87■□□□□ 0.45
CACNA1A-228ENST00000636610 DEPDC5O75140 1603 aa17.87■□□□□ 0.45
CACNA1A-228ENST00000636610 HMOX1P09601 288 aa17.87■□□□□ 0.45
CACNA1A-228ENST00000636610 MVPQ14764 893 aaKnown RBP17.87■□□□□ 0.45
CACNA1A-228ENST00000636610 TMPOP42166 694 aaKnown RBP17.87■□□□□ 0.45
CACNA1A-228ENST00000636610 CD109Q6YHK3 1445 aa17.86■□□□□ 0.45
CACNA1A-228ENST00000636610 ZNF518AQ6AHZ1 1483 aa17.86■□□□□ 0.45
CACNA1A-228ENST00000636610 BECN1Q14457 450 aa17.86■□□□□ 0.45
CACNA1A-228ENST00000636610 VWDEQ8N2E2 1590 aa17.85■□□□□ 0.45
CACNA1A-228ENST00000636610 CABP1Q9NZU7 370 aa17.85■□□□□ 0.45
CACNA1A-228ENST00000636610 A0A1W2PP64 1363 aa17.85■□□□□ 0.45
CACNA1A-228ENST00000636610 FYB1O15117 783 aa17.85■□□□□ 0.45
CACNA1A-228ENST00000636610 NGEFQ8N5V2 710 aa17.85■□□□□ 0.45
CACNA1A-228ENST00000636610 TBC1D2Q9BYX2 928 aa17.85■□□□□ 0.45
CACNA1A-228ENST00000636610 C1orf115Q9H7X2 142 aa17.85■□□□□ 0.45
CACNA1A-228ENST00000636610 TRIM35Q9UPQ4 493 aa17.85■□□□□ 0.45
CACNA1A-228ENST00000636610 TMEM57Q8N5G2 664 aa17.84■□□□□ 0.45
CACNA1A-228ENST00000636610 MLECQ14165 292 aa17.84■□□□□ 0.45
CACNA1A-228ENST00000636610 PHF23Q9BUL5 403 aaPredicted RBP17.84■□□□□ 0.45
CACNA1A-228ENST00000636610 KIDINS220Q9ULH0 1771 aa17.83■□□□□ 0.45
CACNA1A-228ENST00000636610 WAPLQ7Z5K2 1190 aa17.83■□□□□ 0.44
CACNA1A-228ENST00000636610 LNPKQ9C0E8 428 aa17.83■□□□□ 0.44
CACNA1A-228ENST00000636610 ABCA9Q8IUA7 1624 aa17.82■□□□□ 0.44
CACNA1A-228ENST00000636610 SBNO2Q9Y2G9 1366 aa17.81■□□□□ 0.44
CACNA1A-228ENST00000636610 ANKRD36BQ8N2N9 1353 aa17.81■□□□□ 0.44
CACNA1A-228ENST00000636610 TBC1D32Q96NH3 1257 aa17.8■□□□□ 0.44
CACNA1A-228ENST00000636610 DIAPH1O60610 1272 aaKnown RBP17.79■□□□□ 0.44
CACNA1A-228ENST00000636610 ATF7IPQ6VMQ6 1270 aa17.79■□□□□ 0.44
CACNA1A-228ENST00000636610 FOXD4L1Q9NU39 408 aa17.79■□□□□ 0.44
CACNA1A-228ENST00000636610 QRICH2Q9H0J4 1663 aa17.79■□□□□ 0.44
CACNA1A-228ENST00000636610 PRKAR2BP31323 418 aa17.79■□□□□ 0.44
CACNA1A-228ENST00000636610 PLEKHF1Q96S99 279 aa17.79■□□□□ 0.44
CACNA1A-228ENST00000636610 CDK19Q9BWU1 502 aa17.79■□□□□ 0.44
CACNA1A-228ENST00000636610 ZRANB1Q9UGI0 708 aa17.79■□□□□ 0.44
CACNA1A-228ENST00000636610 SHPRHQ149N8 1683 aa17.78■□□□□ 0.44
CACNA1A-228ENST00000636610 ADGRB3O60242 1522 aa17.78■□□□□ 0.44
CACNA1A-228ENST00000636610 ADGRB1O14514 1584 aa17.78■□□□□ 0.44
CACNA1A-228ENST00000636610 C22orf23Q9BZE7 217 aa17.77■□□□□ 0.44
CACNA1A-228ENST00000636610 TERF2IPQ9NYB0 399 aa17.77■□□□□ 0.44
CACNA1A-228ENST00000636610 NCKAP5LQ9HCH0 1330 aa17.77■□□□□ 0.44
CACNA1A-228ENST00000636610 NRXN1Q9ULB1 1477 aa17.77■□□□□ 0.44
CACNA1A-228ENST00000636610 ARAP3Q8WWN8 1544 aa17.77■□□□□ 0.44
CACNA1A-228ENST00000636610 KIAA1210Q9ULL0 1709 aa17.77■□□□□ 0.43
CACNA1A-228ENST00000636610 CCDC27Q2M243 656 aa17.77■□□□□ 0.43
CACNA1A-228ENST00000636610 PHACTR3Q96KR7 559 aa17.77■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms