RNA–Protein interactions for RNA: ENST00000636520.1

CLN5-210, Transcript of CLN5, intracellular trafficking protein, humanhuman

Gene CLN5, Length 5,889 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN5-210ENST00000636520 EIF6P56537 245 aaKnown RBP8.79□□□□□ -1
CLN5-210ENST00000636520 IDI1Q13907 227 aa8.79□□□□□ -1
CLN5-210ENST00000636520 KIF22Q14807 665 aa8.78□□□□□ -1
CLN5-210ENST00000636520 FAM98CQ17RN3 349 aaKnown RBP8.78□□□□□ -1
CLN5-210ENST00000636520 GAS2L2Q8NHY3 880 aa8.78□□□□□ -1
CLN5-210ENST00000636520 RTCBQ9Y3I0 505 aaKnown RBP8.78□□□□□ -1
CLN5-210ENST00000636520 FAM177BA6PVY3 158 aa8.77□□□□□ -1
CLN5-210ENST00000636520 SALL2Q9Y467 1007 aaPredicted RBP8.77□□□□□ -1
CLN5-210ENST00000636520 ARHGEF10O15013 1369 aa8.77□□□□□ -1
CLN5-210ENST00000636520 ARHGAP27Q6ZUM4 889 aa8.77□□□□□ -1.01
CLN5-210ENST00000636520 PDE6BP35913 854 aa8.77□□□□□ -1.01
CLN5-210ENST00000636520 BICDL1Q6ZP65 573 aa8.77□□□□□ -1.01
CLN5-210ENST00000636520 GNL3LQ9NVN8 582 aaKnown RBP8.77□□□□□ -1.01
CLN5-210ENST00000636520 BTG4Q9NY30 223 aa8.77□□□□□ -1.01
CLN5-210ENST00000636520 AFF2P51816 1311 aa8.77□□□□□ -1.01
CLN5-210ENST00000636520 ZNF335Q9H4Z2 1342 aaPredicted RBP8.77□□□□□ -1.01
CLN5-210ENST00000636520 OTUD7BQ6GQQ9 843 aa8.77□□□□□ -1.01
CLN5-210ENST00000636520 FAM83GA6ND36 823 aa8.76□□□□□ -1.01
CLN5-210ENST00000636520 TMEM132EQ6IEE7 984 aa8.76□□□□□ -1.01
CLN5-210ENST00000636520 TCIRG1Q13488 830 aa8.76□□□□□ -1.01
CLN5-210ENST00000636520 CASC1Q6TDU7 716 aa8.76□□□□□ -1.01
CLN5-210ENST00000636520 ZNF530Q6P9A1 599 aaPredicted RBP8.76□□□□□ -1.01
CLN5-210ENST00000636520 PNISRQ8TF01 805 aaKnown RBP8.76□□□□□ -1.01
CLN5-210ENST00000636520 VPS8Q8N3P4 1428 aa8.76□□□□□ -1.01
CLN5-210ENST00000636520 ST20-MTHFSA0A0A6YYL1 179 aa8.76□□□□□ -1.01
CLN5-210ENST00000636520 RAD21O60216 631 aa8.76□□□□□ -1.01
CLN5-210ENST00000636520 MTHFSP49914 203 aa8.76□□□□□ -1.01
CLN5-210ENST00000636520 OGFOD1Q8N543 542 aa8.76□□□□□ -1.01
CLN5-210ENST00000636520 BCS1LQ9Y276 419 aa8.76□□□□□ -1.01
CLN5-210ENST00000636520 FCHSD2O94868 740 aa8.75□□□□□ -1.01
CLN5-210ENST00000636520 SOGA3Q5TF21 947 aa8.75□□□□□ -1.01
CLN5-210ENST00000636520 MPRIPQ6WCQ1 1025 aa8.75□□□□□ -1.01
CLN5-210ENST00000636520 UPF2Q9HAU5 1272 aaKnown RBP8.75□□□□□ -1.01
CLN5-210ENST00000636520 ZNF219Q9P2Y4 722 aaPredicted RBP8.75□□□□□ -1.01
CLN5-210ENST00000636520 PHF14O94880 888 aa8.75□□□□□ -1.01
CLN5-210ENST00000636520 GPATCH3Q96I76 525 aa8.75□□□□□ -1.01
CLN5-210ENST00000636520 IPO8O15397 1037 aaKnown RBP8.75□□□□□ -1.01
CLN5-210ENST00000636520 TCP11L2Q8N4U5 519 aa8.75□□□□□ -1.01
CLN5-210ENST00000636520 ZNF526Q8TF50 670 aaPredicted RBP8.74□□□□□ -1.01
CLN5-210ENST00000636520 NUDT16Q96DE0 195 aaKnown RBP8.74□□□□□ -1.01
CLN5-210ENST00000636520 RBM27Q9P2N5 1060 aaKnown RBP8.74□□□□□ -1.01
CLN5-210ENST00000636520 PLCH2O75038 1416 aa8.74□□□□□ -1.01
CLN5-210ENST00000636520 TAOK2Q9UL54 1235 aa8.74□□□□□ -1.01
CLN5-210ENST00000636520 EFCAB5A4FU69 1503 aa8.74□□□□□ -1.01
CLN5-210ENST00000636520 RFX1P22670 979 aa8.74□□□□□ -1.01
CLN5-210ENST00000636520 GIGYF1O75420 1035 aaPredicted RBP8.74□□□□□ -1.01
CLN5-210ENST00000636520 HSP90AA1P07900 732 aaKnown RBP8.73□□□□□ -1.01
CLN5-210ENST00000636520 ZNF644Q9H582 1327 aaPredicted RBP8.73□□□□□ -1.01
CLN5-210ENST00000636520 A2MP01023 1474 aa8.73□□□□□ -1.01
CLN5-210ENST00000636520 HSP90AB3PQ58FF7 597 aa8.73□□□□□ -1.01
CLN5-210ENST00000636520 CCNL1Q9UK58 526 aaPredicted RBP8.73□□□□□ -1.01
CLN5-210ENST00000636520 TIMELESSQ9UNS1 1208 aa8.73□□□□□ -1.01
CLN5-210ENST00000636520 USP47Q96K76 1375 aa8.73□□□□□ -1.01
CLN5-210ENST00000636520 CC2D1BQ5T0F9 858 aaKnown RBP8.73□□□□□ -1.01
CLN5-210ENST00000636520 MAGI2Q86UL8 1455 aa8.73□□□□□ -1.01
CLN5-210ENST00000636520 VPS53Q5VIR6 699 aa8.72□□□□□ -1.01
CLN5-210ENST00000636520 CRBNQ96SW2 442 aa8.72□□□□□ -1.01
CLN5-210ENST00000636520 KDM2BQ8NHM5 1336 aa8.72□□□□□ -1.01
CLN5-210ENST00000636520 AMOTQ4VCS5 1084 aa8.72□□□□□ -1.01
CLN5-210ENST00000636520 TRAPPC3LQ5T215 181 aa8.72□□□□□ -1.01
CLN5-210ENST00000636520 WWC2Q6AWC2 1192 aa8.72□□□□□ -1.01
CLN5-210ENST00000636520 SEPT12Q8IYM1 358 aa8.72□□□□□ -1.01
CLN5-210ENST00000636520 HFM1A2PYH4 1435 aa8.72□□□□□ -1.01
CLN5-210ENST00000636520 NPHP4O75161 1426 aaPredicted RBP8.72□□□□□ -1.01
CLN5-210ENST00000636520 TMEM94Q12767 1356 aa8.72□□□□□ -1.01
CLN5-210ENST00000636520 EIF2S2P20042 333 aaKnown RBP8.72□□□□□ -1.01
CLN5-210ENST00000636520 CHRNA2Q15822 529 aa8.72□□□□□ -1.01
CLN5-210ENST00000636520 MRS2Q9HD23 443 aa8.72□□□□□ -1.01
CLN5-210ENST00000636520 RIC3Q7Z5B4 369 aa8.71□□□□□ -1.01
CLN5-210ENST00000636520 YTHDC1Q96MU7 727 aaKnown RBP8.71□□□□□ -1.01
CLN5-210ENST00000636520 RRP7AQ9Y3A4 280 aaKnown RBP8.71□□□□□ -1.01
CLN5-210ENST00000636520 CCDC141Q6ZP82 1450 aa8.71□□□□□ -1.01
CLN5-210ENST00000636520 IL2RBP14784 551 aa8.71□□□□□ -1.01
CLN5-210ENST00000636520 DIAPH1O60610 1272 aaKnown RBP8.71□□□□□ -1.02
CLN5-210ENST00000636520 EAPPQ56P03 285 aaPredicted RBP8.71□□□□□ -1.02
CLN5-210ENST00000636520 ABT1Q9ULW3 272 aaKnown RBP8.71□□□□□ -1.02
CLN5-210ENST00000636520 CASKIN1Q8WXD9 1431 aa8.7□□□□□ -1.02
CLN5-210ENST00000636520 MARCH6O60337 910 aa8.7□□□□□ -1.02
CLN5-210ENST00000636520 ZSCAN29Q8IWY8 852 aaPredicted RBP8.7□□□□□ -1.02
CLN5-210ENST00000636520 HOOK2Q96ED9 719 aa8.7□□□□□ -1.02
CLN5-210ENST00000636520 MPHOSPH8Q99549 860 aa8.7□□□□□ -1.02
CLN5-210ENST00000636520 C9orf78Q9NZ63 289 aaPredicted RBP8.7□□□□□ -1.02
CLN5-210ENST00000636520 H0YIN7 160 aa8.7□□□□□ -1.02
CLN5-210ENST00000636520 TCERG1O14776 1098 aaKnown RBP8.7□□□□□ -1.02
CLN5-210ENST00000636520 SUPT20HQ8NEM7 779 aa8.7□□□□□ -1.02
CLN5-210ENST00000636520 SPDYE4A6NLX3 237 aa8.7□□□□□ -1.02
CLN5-210ENST00000636520 UNC5CLQ8IV45 518 aa8.7□□□□□ -1.02
CLN5-210ENST00000636520 EYA3Q99504 573 aa8.7□□□□□ -1.02
CLN5-210ENST00000636520 TOMM22Q9NS69 142 aa8.7□□□□□ -1.02
CLN5-210ENST00000636520 CUX1P39880 1505 aa8.7□□□□□ -1.02
CLN5-210ENST00000636520 NUP160Q12769 1436 aa8.7□□□□□ -1.02
CLN5-210ENST00000636520 C6orf229H3BNL8 230 aa8.7□□□□□ -1.02
CLN5-210ENST00000636520 SAMD1Q6SPF0 538 aaPredicted RBP8.7□□□□□ -1.02
CLN5-210ENST00000636520 ZCRB1Q8TBF4 217 aaKnown RBP8.7□□□□□ -1.02
CLN5-210ENST00000636520 ZNF408Q9H9D4 720 aa8.7□□□□□ -1.02
CLN5-210ENST00000636520 ARAP1Q96P48 1450 aa8.7□□□□□ -1.02
CLN5-210ENST00000636520 ACSBG1Q96GR2 724 aa8.69□□□□□ -1.02
CLN5-210ENST00000636520 WDR78Q5VTH9 848 aa8.69□□□□□ -1.02
CLN5-210ENST00000636520 ANP32EQ9BTT0 268 aa8.69□□□□□ -1.02
CLN5-210ENST00000636520 SETDB2Q96T68 719 aa8.69□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms