RNA–Protein interactions for RNA: ENST00000636475.1

PCCA-213, Transcript of propionyl-CoA carboxylase subunit alpha, humanhuman

TSL 5

Gene PCCA, Length 1,971 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCCA-213ENST00000636475 GOLGA2Q08379 1002 aa13.17□□□□□ -0.3
PCCA-213ENST00000636475 TULP4Q9NRJ4 1543 aa13.17□□□□□ -0.3
PCCA-213ENST00000636475 TMEM132EQ6IEE7 984 aa13.16□□□□□ -0.3
PCCA-213ENST00000636475 ANKRD36BQ8N2N9 1353 aa13.15□□□□□ -0.3
PCCA-213ENST00000636475 EXOC6Q8TAG9 804 aa13.15□□□□□ -0.3
PCCA-213ENST00000636475 CLTCQ00610 1675 aaKnown RBP13.15□□□□□ -0.3
PCCA-213ENST00000636475 SHPRHQ149N8 1683 aa13.15□□□□□ -0.3
PCCA-213ENST00000636475 CGNL1Q0VF96 1302 aa13.14□□□□□ -0.31
PCCA-213ENST00000636475 DUSP27Q5VZP5 1158 aa13.14□□□□□ -0.31
PCCA-213ENST00000636475 MORC1Q86VD1 984 aa13.14□□□□□ -0.31
PCCA-213ENST00000636475 GOLGA6L2Q8N9W4 650 aaPredicted RBP13.13□□□□□ -0.31
PCCA-213ENST00000636475 SLFN5Q08AF3 891 aa13.12□□□□□ -0.31
PCCA-213ENST00000636475 TRMT2AQ8IZ69 625 aaKnown RBP13.12□□□□□ -0.31
PCCA-213ENST00000636475 SLC12A5Q9H2X9 1139 aa13.12□□□□□ -0.31
PCCA-213ENST00000636475 SPATA31D1Q6ZQQ2 1576 aa13.12□□□□□ -0.31
PCCA-213ENST00000636475 PTPRMP28827 1452 aa13.11□□□□□ -0.31
PCCA-213ENST00000636475 NKTRP30414 1462 aaKnown RBP13.11□□□□□ -0.31
PCCA-213ENST00000636475 ANKRD26Q9UPS8 1709 aa13.11□□□□□ -0.31
PCCA-213ENST00000636475 E9PSI1 815 aa13.11□□□□□ -0.31
PCCA-213ENST00000636475 ATAD2Q6PL18 1390 aa13.1□□□□□ -0.31
PCCA-213ENST00000636475 ALKQ9UM73 1620 aa13.1□□□□□ -0.31
PCCA-213ENST00000636475 TCERG1O14776 1098 aaKnown RBP13.1□□□□□ -0.31
PCCA-213ENST00000636475 NCBP3Q53F19 620 aaKnown RBP13.1□□□□□ -0.31
PCCA-213ENST00000636475 CFAP53Q96M91 514 aa13.1□□□□□ -0.31
PCCA-213ENST00000636475 YTHDC2Q9H6S0 1430 aaKnown RBP13.09□□□□□ -0.31
PCCA-213ENST00000636475 APAF1O14727 1248 aa13.09□□□□□ -0.31
PCCA-213ENST00000636475 ARHGEF40Q8TER5 1519 aa13.09□□□□□ -0.31
PCCA-213ENST00000636475 DLC1Q96QB1 1528 aa13.09□□□□□ -0.31
PCCA-213ENST00000636475 NUTM2DQ5VT03 806 aaPredicted RBP13.09□□□□□ -0.31
PCCA-213ENST00000636475 CCDC146Q8IYE0 955 aa13.09□□□□□ -0.31
PCCA-213ENST00000636475 MED14O60244 1454 aa13.08□□□□□ -0.32
PCCA-213ENST00000636475 ABCC11Q96J66 1382 aa13.08□□□□□ -0.32
PCCA-213ENST00000636475 ADAMTSL3P82987 1691 aa13.07□□□□□ -0.32
PCCA-213ENST00000636475 IQSEC2Q5JU85 1478 aa13.07□□□□□ -0.32
PCCA-213ENST00000636475 MS4A1P11836 297 aa13.07□□□□□ -0.32
PCCA-213ENST00000636475 RUNDC1Q96C34 613 aa13.07□□□□□ -0.32
PCCA-213ENST00000636475 CRBNQ96SW2 442 aa13.07□□□□□ -0.32
PCCA-213ENST00000636475 PLIN1O60240 522 aa13.06□□□□□ -0.32
PCCA-213ENST00000636475 ILDR1Q86SU0 546 aaPredicted RBP13.06□□□□□ -0.32
PCCA-213ENST00000636475 SETD1AO15047 1707 aaKnown RBP13.06□□□□□ -0.32
PCCA-213ENST00000636475 MSH5O43196 834 aa13.05□□□□□ -0.32
PCCA-213ENST00000636475 STAG3Q9UJ98 1225 aa13.05□□□□□ -0.32
PCCA-213ENST00000636475 A2ML1A8K2U0 1454 aa13.05□□□□□ -0.32
PCCA-213ENST00000636475 FBXO31Q5XUX0 539 aaPredicted RBP13.05□□□□□ -0.32
PCCA-213ENST00000636475 CABP2Q9NPB3 220 aa13.05□□□□□ -0.32
PCCA-213ENST00000636475 TERF2IPQ9NYB0 399 aa13.05□□□□□ -0.32
PCCA-213ENST00000636475 A0A1W2PP64 1363 aa13.04□□□□□ -0.32
PCCA-213ENST00000636475 SRPK2P78362 688 aaKnown RBP13.04□□□□□ -0.32
PCCA-213ENST00000636475 POGKQ9P215 609 aa13.04□□□□□ -0.32
PCCA-213ENST00000636475 KIF20BQ96Q89 1820 aa13.04□□□□□ -0.32
PCCA-213ENST00000636475 MTHFSP49914 203 aa13.03□□□□□ -0.32
PCCA-213ENST00000636475 CCDC27Q2M243 656 aa13.03□□□□□ -0.32
PCCA-213ENST00000636475 ERICH6Q7L0X2 663 aa13.03□□□□□ -0.32
PCCA-213ENST00000636475 ADGRB2O60241 1585 aa13.03□□□□□ -0.32
PCCA-213ENST00000636475 WWC1Q8IX03 1113 aa13.03□□□□□ -0.32
PCCA-213ENST00000636475 PRAM1Q96QH2 718 aa13.03□□□□□ -0.32
PCCA-213ENST00000636475 STK26Q9P289 416 aa13.03□□□□□ -0.32
PCCA-213ENST00000636475 WDR63Q8IWG1 891 aa13.02□□□□□ -0.32
PCCA-213ENST00000636475 RIMS2Q9UQ26 1411 aa13.02□□□□□ -0.33
PCCA-213ENST00000636475 ANP32AP39687 249 aaKnown RBP13.01□□□□□ -0.33
PCCA-213ENST00000636475 CENPQQ7L2Z9 268 aaPredicted RBP13.01□□□□□ -0.33
PCCA-213ENST00000636475 CD163L1Q9NR16 1453 aa13.01□□□□□ -0.33
PCCA-213ENST00000636475 TNNT2P45379 298 aaPredicted RBP13.01□□□□□ -0.33
PCCA-213ENST00000636475 KNDC1Q76NI1 1749 aa13.01□□□□□ -0.33
PCCA-213ENST00000636475 ATP7BP35670 1465 aa13□□□□□ -0.33
PCCA-213ENST00000636475 HDGFL2Q7Z4V5 671 aaPredicted RBP13□□□□□ -0.33
PCCA-213ENST00000636475 ABCF1Q8NE71 845 aaKnown RBP eCLIP13□□□□□ -0.33
PCCA-213ENST00000636475 SPINK5Q9NQ38 1064 aaPredicted RBP13□□□□□ -0.33
PCCA-213ENST00000636475 KDM2BQ8NHM5 1336 aa13□□□□□ -0.33
PCCA-213ENST00000636475 SAFB2Q14151 953 aaKnown RBP eCLIP13□□□□□ -0.33
PCCA-213ENST00000636475 C20orf194Q5TEA3 1177 aa13□□□□□ -0.33
PCCA-213ENST00000636475 NLRP1Q9C000 1473 aa12.99□□□□□ -0.33
PCCA-213ENST00000636475 MINK1Q8N4C8 1332 aaPredicted RBP12.99□□□□□ -0.33
PCCA-213ENST00000636475 PDE3AQ14432 1141 aa12.99□□□□□ -0.33
PCCA-213ENST00000636475 TCP11L2Q8N4U5 519 aa12.99□□□□□ -0.33
PCCA-213ENST00000636475 NRXN3Q9Y4C0 1643 aa12.99□□□□□ -0.33
PCCA-213ENST00000636475 COL3A1P02461 1466 aaPredicted RBP12.98□□□□□ -0.33
PCCA-213ENST00000636475 HDGFP51858 240 aaKnown RBP12.98□□□□□ -0.33
PCCA-213ENST00000636475 CDK19Q9BWU1 502 aa12.98□□□□□ -0.33
PCCA-213ENST00000636475 AAMPQ13685 434 aa12.97□□□□□ -0.33
PCCA-213ENST00000636475 ESF1Q9H501 851 aaKnown RBP12.97□□□□□ -0.33
PCCA-213ENST00000636475 FYB1O15117 783 aa12.96□□□□□ -0.34
PCCA-213ENST00000636475 PDE4AP27815 886 aa12.96□□□□□ -0.34
PCCA-213ENST00000636475 IPO9Q96P70 1041 aaKnown RBP12.96□□□□□ -0.34
PCCA-213ENST00000636475 BACH2Q9BYV9 841 aa12.96□□□□□ -0.34
PCCA-213ENST00000636475 PNNQ9H307 717 aaKnown RBP12.96□□□□□ -0.34
PCCA-213ENST00000636475 MYH16Q9H6N6 1097 aa12.96□□□□□ -0.34
PCCA-213ENST00000636475 DMRT2Q9Y5R5 561 aa12.96□□□□□ -0.34
PCCA-213ENST00000636475 CDC42BPGQ6DT37 1551 aa12.96□□□□□ -0.34
PCCA-213ENST00000636475 ZMYM3Q14202 1370 aa12.95□□□□□ -0.34
PCCA-213ENST00000636475 U2AF1L5P0DN76 240 aaPredicted RBP12.95□□□□□ -0.34
PCCA-213ENST00000636475 U2AF1Q01081 240 aaKnown RBP eCLIP12.95□□□□□ -0.341e-7■■■■■ 30.6
PCCA-213ENST00000636475 SIRT1Q96EB6 747 aa12.95□□□□□ -0.34
PCCA-213ENST00000636475 NOP58Q9Y2X3 529 aaKnown RBP12.95□□□□□ -0.34
PCCA-213ENST00000636475 TECPR2O15040 1411 aa12.94□□□□□ -0.34
PCCA-213ENST00000636475 FAM135BQ49AJ0 1406 aa12.94□□□□□ -0.34
PCCA-213ENST00000636475 CT47B1P0C2W7 299 aaPredicted RBP12.94□□□□□ -0.34
PCCA-213ENST00000636475 PNPLA6Q8IY17 1366 aa12.94□□□□□ -0.34
PCCA-213ENST00000636475 CPS1P31327 1500 aa12.94□□□□□ -0.34
PCCA-213ENST00000636475 BCAR3O75815 825 aa12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms