RNA–Protein interactions for RNA: ENST00000636340.1

GABRA1-213, Transcript of gamma-aminobutyric acid type A receptor alpha1 subunit, humanhuman

TSL 5

Gene GABRA1, Length 2,239 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRA1-213ENST00000636340 CDC42BPBQ9Y5S2 1711 aa8.34□□□□□ -1.08
GABRA1-213ENST00000636340 PER1O15534 1290 aaPredicted RBP8.33□□□□□ -1.08
GABRA1-213ENST00000636340 CD44P16070 742 aaKnown RBP8.33□□□□□ -1.08
GABRA1-213ENST00000636340 HOMEZQ8IX15 550 aa8.33□□□□□ -1.08
GABRA1-213ENST00000636340 MS4A3Q96HJ5 214 aa8.33□□□□□ -1.08
GABRA1-213ENST00000636340 LAMC1P11047 1609 aa8.33□□□□□ -1.08
GABRA1-213ENST00000636340 PREX2Q70Z35 1606 aa8.33□□□□□ -1.08
GABRA1-213ENST00000636340 UNC13BO14795 1591 aa8.33□□□□□ -1.08
GABRA1-213ENST00000636340 RRP1P56182 461 aaKnown RBP8.33□□□□□ -1.08
GABRA1-213ENST00000636340 TSPOAP1O95153 1857 aa8.32□□□□□ -1.08
GABRA1-213ENST00000636340 MAST1Q9Y2H9 1570 aa8.32□□□□□ -1.08
GABRA1-213ENST00000636340 NLRP13Q86W25 1043 aa8.32□□□□□ -1.08
GABRA1-213ENST00000636340 KDM4CQ9H3R0 1056 aa8.32□□□□□ -1.08
GABRA1-213ENST00000636340 A2MP01023 1474 aa8.32□□□□□ -1.08
GABRA1-213ENST00000636340 INSRP06213 1382 aa8.32□□□□□ -1.08
GABRA1-213ENST00000636340 PPP1R15BQ5SWA1 713 aa8.31□□□□□ -1.08
GABRA1-213ENST00000636340 CHRDL2Q6WN34 429 aa8.31□□□□□ -1.08
GABRA1-213ENST00000636340 PRDM15P57071 1507 aaPredicted RBP8.31□□□□□ -1.08
GABRA1-213ENST00000636340 COL17A1Q9UMD9 1497 aaPredicted RBP8.31□□□□□ -1.08
GABRA1-213ENST00000636340 GOLGA2Q08379 1002 aa8.31□□□□□ -1.08
GABRA1-213ENST00000636340 DSG2Q14126 1118 aa8.31□□□□□ -1.08
GABRA1-213ENST00000636340 IPO9Q96P70 1041 aaKnown RBP8.31□□□□□ -1.08
GABRA1-213ENST00000636340 DAXXQ9UER7 740 aaPredicted RBP8.31□□□□□ -1.08
GABRA1-213ENST00000636340 ZMYM4Q5VZL5 1548 aa8.31□□□□□ -1.08
GABRA1-213ENST00000636340 CCDC144AA2RUR9 1427 aa8.31□□□□□ -1.08
GABRA1-213ENST00000636340 PDE3BQ13370 1112 aa8.3□□□□□ -1.08
GABRA1-213ENST00000636340 NBPF1Q3BBV0 1214 aa8.3□□□□□ -1.08
GABRA1-213ENST00000636340 RSPH4AQ5TD94 716 aa8.3□□□□□ -1.08
GABRA1-213ENST00000636340 TESK2Q96S53 571 aa8.3□□□□□ -1.08
GABRA1-213ENST00000636340 FAM69CQ0P6D2 419 aa8.3□□□□□ -1.08
GABRA1-213ENST00000636340 KRI1Q8N9T8 703 aaKnown RBP8.3□□□□□ -1.08
GABRA1-213ENST00000636340 EXOC6Q8TAG9 804 aa8.3□□□□□ -1.08
GABRA1-213ENST00000636340 RCAN3Q9UKA8 241 aa8.3□□□□□ -1.08
GABRA1-213ENST00000636340 WDR7Q9Y4E6 1490 aa8.3□□□□□ -1.08
GABRA1-213ENST00000636340 KIF13AQ9H1H9 1805 aa8.3□□□□□ -1.08
GABRA1-213ENST00000636340 WASHC2CQ9Y4E1 1318 aa8.29□□□□□ -1.08
GABRA1-213ENST00000636340 ARIH1Q9Y4X5 557 aaPredicted RBP8.29□□□□□ -1.08
GABRA1-213ENST00000636340 IQGAP3Q86VI3 1631 aa8.29□□□□□ -1.08
GABRA1-213ENST00000636340 BLMP54132 1417 aaPredicted RBP8.29□□□□□ -1.08
GABRA1-213ENST00000636340 TTC37Q6PGP7 1564 aa8.29□□□□□ -1.08
GABRA1-213ENST00000636340 DISP3Q9P2K9 1392 aa8.29□□□□□ -1.08
GABRA1-213ENST00000636340 ATP10AO60312 1499 aa8.29□□□□□ -1.08
GABRA1-213ENST00000636340 SYCP2Q9BX26 1530 aa8.28□□□□□ -1.08
GABRA1-213ENST00000636340 PLXNC1O60486 1568 aa8.28□□□□□ -1.08
GABRA1-213ENST00000636340 DEKP35659 375 aaKnown RBP8.28□□□□□ -1.08
GABRA1-213ENST00000636340 FAM117AQ9C073 453 aa8.28□□□□□ -1.08
GABRA1-213ENST00000636340 MAGI2Q86UL8 1455 aa8.28□□□□□ -1.08
GABRA1-213ENST00000636340 GPR37O15354 613 aa8.27□□□□□ -1.08
GABRA1-213ENST00000636340 ANP32AP39687 249 aaKnown RBP8.27□□□□□ -1.08
GABRA1-213ENST00000636340 SMYD5Q6GMV2 418 aa8.27□□□□□ -1.08
GABRA1-213ENST00000636340 MYO5CQ9NQX4 1742 aa8.27□□□□□ -1.09
GABRA1-213ENST00000636340 DIP2BQ9P265 1576 aa8.27□□□□□ -1.09
GABRA1-213ENST00000636340 ERBINQ96RT1 1412 aa8.27□□□□□ -1.09
GABRA1-213ENST00000636340 TCERG1O14776 1098 aaKnown RBP8.27□□□□□ -1.09
GABRA1-213ENST00000636340 TRIM66O15016 1216 aa8.27□□□□□ -1.09
GABRA1-213ENST00000636340 CDCA7LQ96GN5 454 aa8.27□□□□□ -1.09
GABRA1-213ENST00000636340 AK7Q96M32 723 aa8.27□□□□□ -1.09
GABRA1-213ENST00000636340 GPHNQ9NQX3 736 aaPredicted RBP8.27□□□□□ -1.09
GABRA1-213ENST00000636340 EIF2AK4Q9P2K8 1649 aaKnown RBP8.27□□□□□ -1.09
GABRA1-213ENST00000636340 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP8.26□□□□□ -1.09
GABRA1-213ENST00000636340 PDE4DQ08499 809 aa8.26□□□□□ -1.09
GABRA1-213ENST00000636340 PLEKHH2Q8IVE3 1493 aa8.26□□□□□ -1.09
GABRA1-213ENST00000636340 RNF17Q9BXT8 1623 aaKnown RBP8.26□□□□□ -1.09
GABRA1-213ENST00000636340 TTLL13PA6NNM8 815 aa8.26□□□□□ -1.09
GABRA1-213ENST00000636340 MKRN3Q13064 507 aaKnown RBP8.26□□□□□ -1.09
GABRA1-213ENST00000636340 RGL3Q3MIN7 710 aa8.26□□□□□ -1.09
GABRA1-213ENST00000636340 PANK3Q9H999 370 aa8.25□□□□□ -1.09
GABRA1-213ENST00000636340 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP8.25□□□□□ -1.09
GABRA1-213ENST00000636340 MS4A1P11836 297 aa8.25□□□□□ -1.09
GABRA1-213ENST00000636340 FECHP22830 423 aa8.25□□□□□ -1.09
GABRA1-213ENST00000636340 SALL2Q9Y467 1007 aaPredicted RBP8.25□□□□□ -1.09
GABRA1-213ENST00000636340 ARHGAP5Q13017 1502 aa8.25□□□□□ -1.09
GABRA1-213ENST00000636340 DUOX2Q9NRD8 1548 aa8.25□□□□□ -1.09
GABRA1-213ENST00000636340 CC2D1BQ5T0F9 858 aaKnown RBP8.24□□□□□ -1.09
GABRA1-213ENST00000636340 BACH2Q9BYV9 841 aa8.24□□□□□ -1.09
GABRA1-213ENST00000636340 GRXCR2A6NFK2 248 aa8.23□□□□□ -1.09
GABRA1-213ENST00000636340 PDIA6Q15084 440 aa8.23□□□□□ -1.09
GABRA1-213ENST00000636340 C1orf115Q9H7X2 142 aa8.23□□□□□ -1.09
GABRA1-213ENST00000636340 TMF1P82094 1093 aa8.22□□□□□ -1.09
GABRA1-213ENST00000636340 POTEHQ6S545 545 aa8.22□□□□□ -1.09
GABRA1-213ENST00000636340 ARID3AQ99856 593 aa8.22□□□□□ -1.09
GABRA1-213ENST00000636340 ABCA9Q8IUA7 1624 aa8.22□□□□□ -1.09
GABRA1-213ENST00000636340 CD109Q6YHK3 1445 aa8.22□□□□□ -1.09
GABRA1-213ENST00000636340 IQGAP1P46940 1657 aa8.22□□□□□ -1.09
GABRA1-213ENST00000636340 PPRC1Q5VV67 1664 aaKnown RBP8.22□□□□□ -1.09
GABRA1-213ENST00000636340 PLIN1O60240 522 aa8.22□□□□□ -1.09
GABRA1-213ENST00000636340 TRIM35Q9UPQ4 493 aa8.22□□□□□ -1.09
GABRA1-213ENST00000636340 MADDQ8WXG6 1647 aa8.21□□□□□ -1.09
GABRA1-213ENST00000636340 ILDR1Q86SU0 546 aaPredicted RBP8.21□□□□□ -1.09
GABRA1-213ENST00000636340 BMP2KQ9NSY1 1161 aaPredicted RBP8.21□□□□□ -1.09
GABRA1-213ENST00000636340 MAP3K4Q9Y6R4 1608 aa8.21□□□□□ -1.1
GABRA1-213ENST00000636340 PLEKHG3A1L390 1219 aa8.21□□□□□ -1.1
GABRA1-213ENST00000636340 CRBNQ96SW2 442 aa8.21□□□□□ -1.1
GABRA1-213ENST00000636340 MICALL2Q8IY33 904 aa8.2□□□□□ -1.1
GABRA1-213ENST00000636340 ADAMTS8Q9UP79 889 aa8.2□□□□□ -1.1
GABRA1-213ENST00000636340 ZNF521Q96K83 1311 aa8.2□□□□□ -1.1
GABRA1-213ENST00000636340 PLCH2O75038 1416 aa8.2□□□□□ -1.1
GABRA1-213ENST00000636340 GALR2O43603 387 aaPredicted RBP8.19□□□□□ -1.1
GABRA1-213ENST00000636340 KDM2BQ8NHM5 1336 aa8.19□□□□□ -1.1
GABRA1-213ENST00000636340 PLEKHH1Q9ULM0 1364 aa8.19□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms