RNA–Protein interactions for RNA: ENST00000636314.1

CLN6-214, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 3 BASIC

Gene CLN6, Length 442 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-214ENST00000636314 RGL3Q3MIN7 710 aa27.13■■□□□ 1.93
CLN6-214ENST00000636314 NGLY1Q96IV0 654 aa27.13■■□□□ 1.93
CLN6-214ENST00000636314 ORAI2Q96SN7 254 aa27.11■■□□□ 1.93
CLN6-214ENST00000636314 ANKRD30BQ9BXX2 1392 aa27.1■■□□□ 1.93
CLN6-214ENST00000636314 SOS2Q07890 1332 aaPredicted RBP27.08■■□□□ 1.93
CLN6-214ENST00000636314 HRCP23327 699 aa27.07■■□□□ 1.92
CLN6-214ENST00000636314 ADGRF5Q8IZF2 1346 aa27.07■■□□□ 1.92
CLN6-214ENST00000636314 PRAG1Q86YV5 1406 aa27.05■■□□□ 1.92
CLN6-214ENST00000636314 COL22A1Q8NFW1 1626 aaPredicted RBP27.05■■□□□ 1.92
CLN6-214ENST00000636314 USP21Q9UK80 565 aa27.04■■□□□ 1.92
CLN6-214ENST00000636314 PIK3C2GO75747 1445 aa27.02■■□□□ 1.92
CLN6-214ENST00000636314 MARF1Q9Y4F3 1742 aaKnown RBP27.01■■□□□ 1.91
CLN6-214ENST00000636314 CDC42BPGQ6DT37 1551 aa27.01■■□□□ 1.91
CLN6-214ENST00000636314 MYOM2P54296 1465 aa27■■□□□ 1.91
CLN6-214ENST00000636314 TRPC5Q9UL62 973 aaPredicted RBP26.99■■□□□ 1.91
CLN6-214ENST00000636314 ATAD2Q6PL18 1390 aa26.98■■□□□ 1.91
CLN6-214ENST00000636314 ESCO1Q5FWF5 840 aa26.98■■□□□ 1.91
CLN6-214ENST00000636314 NPHP3Q7Z494 1330 aa26.96■■□□□ 1.91
CLN6-214ENST00000636314 KNDC1Q76NI1 1749 aa26.96■■□□□ 1.91
CLN6-214ENST00000636314 NRXN1Q9ULB1 1477 aa26.95■■□□□ 1.91
CLN6-214ENST00000636314 FNBP4Q8N3X1 1017 aaPredicted RBP26.95■■□□□ 1.9
CLN6-214ENST00000636314 ATRNO75882 1429 aa26.95■■□□□ 1.9
CLN6-214ENST00000636314 PXDNQ92626 1479 aa26.93■■□□□ 1.9
CLN6-214ENST00000636314 XPCQ01831 940 aaPredicted RBP26.92■■□□□ 1.9
CLN6-214ENST00000636314 STK26Q9P289 416 aa26.92■■□□□ 1.9
CLN6-214ENST00000636314 TECPR2O15040 1411 aa26.91■■□□□ 1.9
CLN6-214ENST00000636314 LRPPRCP42704 1394 aaKnown RBP26.91■■□□□ 1.9
CLN6-214ENST00000636314 NUTM2FA1L443 756 aa26.9■■□□□ 1.9
CLN6-214ENST00000636314 FOXO3O43524 673 aa26.89■■□□□ 1.9
CLN6-214ENST00000636314 TMEM132EQ6IEE7 984 aa26.88■■□□□ 1.89
CLN6-214ENST00000636314 WAPLQ7Z5K2 1190 aa26.88■■□□□ 1.89
CLN6-214ENST00000636314 YTHDC2Q9H6S0 1430 aaKnown RBP26.87■■□□□ 1.89
CLN6-214ENST00000636314 FMN2Q9NZ56 1722 aa26.87■■□□□ 1.89
CLN6-214ENST00000636314 ABCC11Q96J66 1382 aa26.86■■□□□ 1.89
CLN6-214ENST00000636314 BCL9LQ86UU0 1499 aa26.86■■□□□ 1.89
CLN6-214ENST00000636314 EP400Q96L91 3159 aa26.85■■□□□ 1.89
CLN6-214ENST00000636314 C14orf93Q9H972 538 aaKnown RBP26.85■■□□□ 1.89
CLN6-214ENST00000636314 TNKS1BP1Q9C0C2 1729 aaKnown RBP26.85■■□□□ 1.89
CLN6-214ENST00000636314 KIF1AQ12756 1690 aa26.84■■□□□ 1.89
CLN6-214ENST00000636314 CFAP70Q5T0N1 1121 aa26.83■■□□□ 1.89
CLN6-214ENST00000636314 PLEKHH1Q9ULM0 1364 aa26.83■■□□□ 1.88
CLN6-214ENST00000636314 RGPD8O14715 1765 aaPredicted RBP26.82■■□□□ 1.88
CLN6-214ENST00000636314 DHX57Q6P158 1386 aaKnown RBP26.81■■□□□ 1.88
CLN6-214ENST00000636314 DCAF11Q8TEB1 546 aa26.8■■□□□ 1.88
CLN6-214ENST00000636314 GJD4Q96KN9 370 aaPredicted RBP26.79■■□□□ 1.88
CLN6-214ENST00000636314 KDM2AQ9Y2K7 1162 aa26.78■■□□□ 1.88
CLN6-214ENST00000636314 SRCAPQ6ZRS2 3230 aa26.77■■□□□ 1.88
CLN6-214ENST00000636314 ZRANB1Q9UGI0 708 aa26.77■■□□□ 1.88
CLN6-214ENST00000636314 USP32Q8NFA0 1604 aa26.76■■□□□ 1.87
CLN6-214ENST00000636314 ADGRB1O14514 1584 aa26.76■■□□□ 1.87
CLN6-214ENST00000636314 STAC3Q96MF2 364 aa26.76■■□□□ 1.87
CLN6-214ENST00000636314 SPATA31A3Q5VYP0 1347 aa26.75■■□□□ 1.87
CLN6-214ENST00000636314 BRWD3Q6RI45 1802 aa26.75■■□□□ 1.87
CLN6-214ENST00000636314 GLI3P10071 1580 aa26.75■■□□□ 1.87
CLN6-214ENST00000636314 CCDC125Q86Z20 511 aa26.74■■□□□ 1.87
CLN6-214ENST00000636314 UNC5CLQ8IV45 518 aa26.74■■□□□ 1.87
CLN6-214ENST00000636314 DLC1Q96QB1 1528 aa26.74■■□□□ 1.87
CLN6-214ENST00000636314 KRT28Q7Z3Y7 464 aa26.73■■□□□ 1.87
CLN6-214ENST00000636314 SIRT1Q96EB6 747 aa26.73■■□□□ 1.87
CLN6-214ENST00000636314 SLIT2O94813 1529 aa26.73■■□□□ 1.87
CLN6-214ENST00000636314 RALGAPBQ86X10 1494 aa26.73■■□□□ 1.87
CLN6-214ENST00000636314 HAP1P54257 671 aaPredicted RBP26.71■■□□□ 1.87
CLN6-214ENST00000636314 PLCH1Q4KWH8 1693 aa26.7■■□□□ 1.87
CLN6-214ENST00000636314 PLEKHG5O94827 1062 aa26.7■■□□□ 1.86
CLN6-214ENST00000636314 TNS3Q68CZ2 1445 aa26.69■■□□□ 1.86
CLN6-214ENST00000636314 ABCA3Q99758 1704 aa26.68■■□□□ 1.86
CLN6-214ENST00000636314 PRAM1Q96QH2 718 aa26.68■■□□□ 1.86
CLN6-214ENST00000636314 PHF8Q9UPP1 1060 aa26.68■■□□□ 1.86
CLN6-214ENST00000636314 NWD2Q9ULI1 1742 aa26.66■■□□□ 1.86
CLN6-214ENST00000636314 PSME1Q06323 249 aa26.66■■□□□ 1.86
CLN6-214ENST00000636314 SAFB2Q14151 953 aaKnown RBP eCLIP26.65■■□□□ 1.86
CLN6-214ENST00000636314 POGKQ9P215 609 aa26.65■■□□□ 1.86
CLN6-214ENST00000636314 LMOD2Q6P5Q4 547 aa26.64■■□□□ 1.86
CLN6-214ENST00000636314 CABLES1Q8TDN4 633 aa26.64■■□□□ 1.86
CLN6-214ENST00000636314 TRAK1Q9UPV9 953 aa26.64■■□□□ 1.86
CLN6-214ENST00000636314 KIAA1210Q9ULL0 1709 aa26.64■■□□□ 1.85
CLN6-214ENST00000636314 BLMP54132 1417 aaPredicted RBP26.64■■□□□ 1.85
CLN6-214ENST00000636314 ADGRB2O60241 1585 aa26.63■■□□□ 1.85
CLN6-214ENST00000636314 ARHGEF28Q8N1W1 1705 aaKnown RBP26.62■■□□□ 1.85
CLN6-214ENST00000636314 CCDC9Q9Y3X0 531 aaKnown RBP26.62■■□□□ 1.85
CLN6-214ENST00000636314 SEPT12Q8IYM1 358 aa26.6■■□□□ 1.85
CLN6-214ENST00000636314 SBNO1A3KN83 1393 aa26.59■■□□□ 1.85
CLN6-214ENST00000636314 VPS72Q15906 364 aa26.59■■□□□ 1.85
CLN6-214ENST00000636314 SF3B2Q13435 895 aaKnown RBP26.58■■□□□ 1.85
CLN6-214ENST00000636314 ARHGEF10O15013 1369 aa26.58■■□□□ 1.84
CLN6-214ENST00000636314 DEFB132Q7Z7B7 95 aa26.57■■□□□ 1.84
CLN6-214ENST00000636314 PMFBP1Q8TBY8 1022 aa26.56■■□□□ 1.84
CLN6-214ENST00000636314 NRAPQ86VF7 1730 aa26.54■■□□□ 1.84
CLN6-214ENST00000636314 TRIM26Q12899 539 aaPredicted RBP26.54■■□□□ 1.84
CLN6-214ENST00000636314 ANKARQ7Z5J8 1434 aa26.54■■□□□ 1.84
CLN6-214ENST00000636314 TRPM3Q9HCF6 1732 aaPredicted RBP26.53■■□□□ 1.84
CLN6-214ENST00000636314 MINK1Q8N4C8 1332 aaPredicted RBP26.53■■□□□ 1.84
CLN6-214ENST00000636314 A0A0G2JS52 829 aa26.52■■□□□ 1.84
CLN6-214ENST00000636314 MYT1Q01538 1121 aa26.52■■□□□ 1.84
CLN6-214ENST00000636314 SIN3AQ96ST3 1273 aa26.52■■□□□ 1.84
CLN6-214ENST00000636314 HIRIP3Q9BW71 556 aaPredicted RBP26.52■■□□□ 1.84
CLN6-214ENST00000636314 EIF3AQ14152 1382 aaKnown RBP26.51■■□□□ 1.83
CLN6-214ENST00000636314 KRT27Q7Z3Y8 459 aa26.51■■□□□ 1.83
CLN6-214ENST00000636314 FAM83GA6ND36 823 aa26.5■■□□□ 1.83
CLN6-214ENST00000636314 ALS2Q96Q42 1657 aa26.5■■□□□ 1.83
Retrieved 100 of 20,778 RNA–protein pairs in 66.6 ms