RNA–Protein interactions for RNA: ENST00000635832.1

GABRB3-217, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

TSL 5

Gene GABRB3, Length 5,593 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-217ENST00000635832 DHX57Q6P158 1386 aaKnown RBP11.7□□□□□ -0.54
GABRB3-217ENST00000635832 FOXD4L6Q3SYB3 417 aaPredicted RBP11.7□□□□□ -0.54
GABRB3-217ENST00000635832 FOXD4L3Q6VB84 417 aaPredicted RBP11.7□□□□□ -0.54
GABRB3-217ENST00000635832 BCL2L13Q9BXK5 485 aa11.7□□□□□ -0.54
GABRB3-217ENST00000635832 GNL3LQ9NVN8 582 aaKnown RBP11.7□□□□□ -0.54
GABRB3-217ENST00000635832 NINLQ9Y2I6 1382 aa11.7□□□□□ -0.54
GABRB3-217ENST00000635832 ST20-MTHFSA0A0A6YYL1 179 aa11.7□□□□□ -0.54
GABRB3-217ENST00000635832 NAT10Q9H0A0 1025 aaKnown RBP11.7□□□□□ -0.54
GABRB3-217ENST00000635832 PSMA5P28066 241 aa11.7□□□□□ -0.54
GABRB3-217ENST00000635832 CDK5RAP3Q96JB5 506 aa11.7□□□□□ -0.54
GABRB3-217ENST00000635832 VPS37CA5D8V6 355 aaPredicted RBP11.69□□□□□ -0.54
GABRB3-217ENST00000635832 RAPGEF2Q9Y4G8 1499 aa11.69□□□□□ -0.54
GABRB3-217ENST00000635832 SYCP1Q15431 976 aa11.69□□□□□ -0.54
GABRB3-217ENST00000635832 DZIP1LQ8IYY4 767 aaKnown RBP11.69□□□□□ -0.54
GABRB3-217ENST00000635832 TXLNAP40222 546 aa11.68□□□□□ -0.54
GABRB3-217ENST00000635832 FAM69CQ0P6D2 419 aa11.68□□□□□ -0.54
GABRB3-217ENST00000635832 DCTN1Q14203 1278 aa11.68□□□□□ -0.54
GABRB3-217ENST00000635832 ARGLU1Q9NWB6 273 aaPredicted RBP11.68□□□□□ -0.54
GABRB3-217ENST00000635832 UBTFL1P0CB47 393 aaPredicted RBP11.67□□□□□ -0.54
GABRB3-217ENST00000635832 PIP4K2AP48426 406 aaPredicted RBP11.67□□□□□ -0.54
GABRB3-217ENST00000635832 AIMP1Q12904 312 aaKnown RBP11.67□□□□□ -0.54
GABRB3-217ENST00000635832 NUCB2P80303 420 aa11.67□□□□□ -0.54
GABRB3-217ENST00000635832 PPP1R1BQ9UD71 204 aaPredicted RBP11.67□□□□□ -0.54
GABRB3-217ENST00000635832 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.67□□□□□ -0.54
GABRB3-217ENST00000635832 ZRSR2Q15696 482 aaKnown RBP11.67□□□□□ -0.54
GABRB3-217ENST00000635832 PLIN1O60240 522 aa11.66□□□□□ -0.54
GABRB3-217ENST00000635832 MNS1Q8NEH6 495 aa11.66□□□□□ -0.54
GABRB3-217ENST00000635832 CALRP27797 417 aaKnown RBP11.66□□□□□ -0.54
GABRB3-217ENST00000635832 PLEKHO1Q53GL0 409 aaPredicted RBP11.66□□□□□ -0.54
GABRB3-217ENST00000635832 RUNDC1Q96C34 613 aa11.66□□□□□ -0.54
GABRB3-217ENST00000635832 KRT18P05783 430 aaKnown RBP11.66□□□□□ -0.54
GABRB3-217ENST00000635832 AAMPQ13685 434 aa11.66□□□□□ -0.54
GABRB3-217ENST00000635832 COG6Q9Y2V7 657 aa11.66□□□□□ -0.54
GABRB3-217ENST00000635832 HIP1O00291 1037 aa11.65□□□□□ -0.54
GABRB3-217ENST00000635832 HSP90B2PQ58FF3 399 aa11.65□□□□□ -0.54
GABRB3-217ENST00000635832 SMG6Q86US8 1419 aaKnown RBP11.65□□□□□ -0.54
GABRB3-217ENST00000635832 FHOD3Q2V2M9 1422 aa11.65□□□□□ -0.54
GABRB3-217ENST00000635832 CNTROBQ8N137 903 aa11.65□□□□□ -0.54
GABRB3-217ENST00000635832 GAS2L2Q8NHY3 880 aa11.65□□□□□ -0.54
GABRB3-217ENST00000635832 ERCC4Q92889 916 aaPredicted RBP11.65□□□□□ -0.54
GABRB3-217ENST00000635832 MAGEC2Q9UBF1 373 aaPredicted RBP11.65□□□□□ -0.54
GABRB3-217ENST00000635832 MTMR7Q9Y216 660 aa11.65□□□□□ -0.54
GABRB3-217ENST00000635832 NLRP6P59044 892 aa11.65□□□□□ -0.55
GABRB3-217ENST00000635832 RBM42Q9BTD8 480 aaKnown RBP11.64□□□□□ -0.55
GABRB3-217ENST00000635832 ZSCAN21Q9Y5A6 473 aaPredicted RBP11.64□□□□□ -0.55
GABRB3-217ENST00000635832 APAF1O14727 1248 aa11.64□□□□□ -0.55
GABRB3-217ENST00000635832 WDHD1O75717 1129 aaPredicted RBP11.64□□□□□ -0.55
GABRB3-217ENST00000635832 SLC4A3P48751 1232 aa11.64□□□□□ -0.55
GABRB3-217ENST00000635832 ANKRD18AQ8IVF6 992 aa11.64□□□□□ -0.55
GABRB3-217ENST00000635832 CAGE1Q8TC20 777 aa11.64□□□□□ -0.55
GABRB3-217ENST00000635832 FSD1Q9BTV5 496 aa11.64□□□□□ -0.55
GABRB3-217ENST00000635832 FILIP1LQ4L180 1135 aa11.64□□□□□ -0.55
GABRB3-217ENST00000635832 CLASRPQ8N2M8 674 aaKnown RBP11.64□□□□□ -0.55
GABRB3-217ENST00000635832 CADPSQ9ULU8 1353 aa11.64□□□□□ -0.55
GABRB3-217ENST00000635832 GNAI3P08754 354 aa11.63□□□□□ -0.55
GABRB3-217ENST00000635832 SMARCE1Q969G3 411 aa11.63□□□□□ -0.55
GABRB3-217ENST00000635832 CHMP5Q9NZZ3 219 aa11.63□□□□□ -0.55
GABRB3-217ENST00000635832 CCDC30Q5VVM6 783 aa11.63□□□□□ -0.55
GABRB3-217ENST00000635832 DESP17661 470 aa11.63□□□□□ -0.55
GABRB3-217ENST00000635832 PROSER2Q86WR7 435 aaPredicted RBP11.63□□□□□ -0.55
GABRB3-217ENST00000635832 ERC1Q8IUD2 1116 aa11.63□□□□□ -0.55
GABRB3-217ENST00000635832 DDX24Q9GZR7 859 aaKnown RBP eCLIP11.63□□□□□ -0.55
GABRB3-217ENST00000635832 TATP17735 454 aaPredicted RBP11.62□□□□□ -0.55
GABRB3-217ENST00000635832 PDCL3Q9H2J4 239 aa11.62□□□□□ -0.55
GABRB3-217ENST00000635832 RRP1P56182 461 aaKnown RBP11.62□□□□□ -0.55
GABRB3-217ENST00000635832 CCDC191Q8NCU4 936 aa11.62□□□□□ -0.55
GABRB3-217ENST00000635832 SDF4Q9BRK5 362 aa11.62□□□□□ -0.55
GABRB3-217ENST00000635832 CCDC158Q5M9N0 1113 aa11.62□□□□□ -0.55
GABRB3-217ENST00000635832 FOSBP53539 338 aa11.62□□□□□ -0.55
GABRB3-217ENST00000635832 CNNM1Q9NRU3 951 aa11.62□□□□□ -0.55
GABRB3-217ENST00000635832 TRIM21P19474 475 aaKnown RBP11.62□□□□□ -0.55
GABRB3-217ENST00000635832 ZNF771Q7L3S4 317 aaPredicted RBP11.62□□□□□ -0.55
GABRB3-217ENST00000635832 NACAP1Q9BZK3 213 aa11.61□□□□□ -0.55
GABRB3-217ENST00000635832 LUC7LQ9NQ29 371 aaKnown RBP11.61□□□□□ -0.55
GABRB3-217ENST00000635832 MYO15BQ96JP2 1530 aa11.61□□□□□ -0.55
GABRB3-217ENST00000635832 NOM1Q5C9Z4 860 aaKnown RBP11.61□□□□□ -0.55
GABRB3-217ENST00000635832 TXLNBQ8N3L3 684 aa11.61□□□□□ -0.55
GABRB3-217ENST00000635832 FAM177BA6PVY3 158 aa11.61□□□□□ -0.55
GABRB3-217ENST00000635832 MPHOSPH10O00566 681 aaKnown RBP11.61□□□□□ -0.55
GABRB3-217ENST00000635832 DNAI2Q9GZS0 605 aa11.61□□□□□ -0.55
GABRB3-217ENST00000635832 KIF7Q2M1P5 1343 aa11.61□□□□□ -0.55
GABRB3-217ENST00000635832 USP47Q96K76 1375 aa11.6□□□□□ -0.55
GABRB3-217ENST00000635832 ERLIN2O94905 339 aa11.6□□□□□ -0.55
GABRB3-217ENST00000635832 TTC39AQ5SRH9 613 aa11.6□□□□□ -0.55
GABRB3-217ENST00000635832 PDILTQ8N807 584 aa11.6□□□□□ -0.55
GABRB3-217ENST00000635832 ABCC8Q09428 1581 aa11.6□□□□□ -0.55
GABRB3-217ENST00000635832 CRBNQ96SW2 442 aa11.6□□□□□ -0.55
GABRB3-217ENST00000635832 CCDC88BA6NC98 1476 aa11.6□□□□□ -0.55
GABRB3-217ENST00000635832 PDE4AP27815 886 aa11.6□□□□□ -0.55
GABRB3-217ENST00000635832 CCP110O43303 1012 aa11.6□□□□□ -0.55
GABRB3-217ENST00000635832 ESCO1Q5FWF5 840 aa11.6□□□□□ -0.55
GABRB3-217ENST00000635832 CDC45O75419 566 aa11.6□□□□□ -0.55
GABRB3-217ENST00000635832 SOGA3Q5TF21 947 aa11.6□□□□□ -0.55
GABRB3-217ENST00000635832 ABTB2Q8N961 1025 aa11.6□□□□□ -0.55
GABRB3-217ENST00000635832 ATP2B2Q01814 1243 aa11.59□□□□□ -0.55
GABRB3-217ENST00000635832 HSP90AA2PQ14568 343 aaPredicted RBP11.59□□□□□ -0.55
GABRB3-217ENST00000635832 LETM1O95202 739 aaPredicted RBP11.59□□□□□ -0.55
GABRB3-217ENST00000635832 PDCP20941 246 aa11.59□□□□□ -0.55
GABRB3-217ENST00000635832 ZNF396Q96N95 335 aaPredicted RBP11.59□□□□□ -0.55
GABRB3-217ENST00000635832 IFT57Q9NWB7 429 aa11.59□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms