RNA–Protein interactions for RNA: ENST00000635652.1

PTPN11-206, Transcript of protein tyrosine phosphatase, non-receptor type 11, humanhuman

TSL 3

Gene PTPN11, Length 588 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN11-206ENST00000635652 ESCO1Q5FWF5 840 aa18.65■□□□□ 0.58
PTPN11-206ENST00000635652 ADAMTS2O95450 1211 aa18.64■□□□□ 0.57
PTPN11-206ENST00000635652 SOS2Q07890 1332 aaPredicted RBP18.64■□□□□ 0.57
PTPN11-206ENST00000635652 LRPPRCP42704 1394 aaKnown RBP18.64■□□□□ 0.57
PTPN11-206ENST00000635652 RAB3GAP2Q9H2M9 1393 aa18.64■□□□□ 0.57
PTPN11-206ENST00000635652 NUTM2FA1L443 756 aa18.63■□□□□ 0.57
PTPN11-206ENST00000635652 PIK3C2GO75747 1445 aa18.63■□□□□ 0.57
PTPN11-206ENST00000635652 NGLY1Q96IV0 654 aa18.62■□□□□ 0.57
PTPN11-206ENST00000635652 ABCC11Q96J66 1382 aa18.62■□□□□ 0.57
PTPN11-206ENST00000635652 LAMC1P11047 1609 aa18.62■□□□□ 0.57
PTPN11-206ENST00000635652 CDC42BPGQ6DT37 1551 aa18.61■□□□□ 0.57
PTPN11-206ENST00000635652 TECPR2O15040 1411 aa18.61■□□□□ 0.57
PTPN11-206ENST00000635652 NPHP3Q7Z494 1330 aa18.6■□□□□ 0.57
PTPN11-206ENST00000635652 YTHDC2Q9H6S0 1430 aaKnown RBP18.59■□□□□ 0.57
PTPN11-206ENST00000635652 PLEKHH1Q9ULM0 1364 aa18.59■□□□□ 0.57
PTPN11-206ENST00000635652 FOXO3O43524 673 aa18.59■□□□□ 0.57
PTPN11-206ENST00000635652 C14orf93Q9H972 538 aaKnown RBP18.59■□□□□ 0.57
PTPN11-206ENST00000635652 QTRT2Q9H974 415 aaKnown RBP18.59■□□□□ 0.57
PTPN11-206ENST00000635652 KNDC1Q76NI1 1749 aa18.58■□□□□ 0.57
PTPN11-206ENST00000635652 XPCQ01831 940 aaPredicted RBP18.58■□□□□ 0.56
PTPN11-206ENST00000635652 CFAP70Q5T0N1 1121 aa18.58■□□□□ 0.56
PTPN11-206ENST00000635652 DHX57Q6P158 1386 aaKnown RBP18.56■□□□□ 0.56
PTPN11-206ENST00000635652 RBM6P78332 1123 aaKnown RBP18.55■□□□□ 0.56
PTPN11-206ENST00000635652 SIRT1Q96EB6 747 aa18.55■□□□□ 0.56
PTPN11-206ENST00000635652 MYOM2P54296 1465 aa18.54■□□□□ 0.56
PTPN11-206ENST00000635652 UPF1Q92900 1129 aaKnown RBP eCLIP18.54■□□□□ 0.56
PTPN11-206ENST00000635652 USP21Q9UK80 565 aa18.54■□□□□ 0.56
PTPN11-206ENST00000635652 CDK12Q9NYV4 1490 aaPredicted RBP18.53■□□□□ 0.56
PTPN11-206ENST00000635652 SAFB2Q14151 953 aaKnown RBP eCLIP18.53■□□□□ 0.56
PTPN11-206ENST00000635652 PXDNQ92626 1479 aa18.52■□□□□ 0.56
PTPN11-206ENST00000635652 NRXN1Q9ULB1 1477 aa18.52■□□□□ 0.56
PTPN11-206ENST00000635652 FMN2Q9NZ56 1722 aa18.52■□□□□ 0.56
PTPN11-206ENST00000635652 PRAM1Q96QH2 718 aa18.52■□□□□ 0.56
PTPN11-206ENST00000635652 POGKQ9P215 609 aa18.51■□□□□ 0.55
PTPN11-206ENST00000635652 KDM2AQ9Y2K7 1162 aa18.51■□□□□ 0.55
PTPN11-206ENST00000635652 COL22A1Q8NFW1 1626 aaPredicted RBP18.51■□□□□ 0.55
PTPN11-206ENST00000635652 RGPD8O14715 1765 aaPredicted RBP18.5■□□□□ 0.55
PTPN11-206ENST00000635652 KRT28Q7Z3Y7 464 aa18.49■□□□□ 0.55
PTPN11-206ENST00000635652 FNBP4Q8N3X1 1017 aaPredicted RBP18.49■□□□□ 0.55
PTPN11-206ENST00000635652 DCAF11Q8TEB1 546 aa18.49■□□□□ 0.55
PTPN11-206ENST00000635652 TRPC5Q9UL62 973 aaPredicted RBP18.49■□□□□ 0.55
PTPN11-206ENST00000635652 PHF8Q9UPP1 1060 aa18.48■□□□□ 0.55
PTPN11-206ENST00000635652 RGS12O14924 1447 aa18.48■□□□□ 0.55
PTPN11-206ENST00000635652 HRCP23327 699 aa18.47■□□□□ 0.55
PTPN11-206ENST00000635652 TRAK1Q9UPV9 953 aa18.47■□□□□ 0.55
PTPN11-206ENST00000635652 KIF1AQ12756 1690 aa18.47■□□□□ 0.55
PTPN11-206ENST00000635652 SPATA31A3Q5VYP0 1347 aa18.46■□□□□ 0.55
PTPN11-206ENST00000635652 PSME1Q06323 249 aa18.45■□□□□ 0.54
PTPN11-206ENST00000635652 MARF1Q9Y4F3 1742 aaKnown RBP18.44■□□□□ 0.54
PTPN11-206ENST00000635652 PLEKHG5O94827 1062 aa18.43■□□□□ 0.54
PTPN11-206ENST00000635652 HAP1P54257 671 aaPredicted RBP18.43■□□□□ 0.54
PTPN11-206ENST00000635652 LMOD2Q6P5Q4 547 aa18.43■□□□□ 0.54
PTPN11-206ENST00000635652 STAC3Q96MF2 364 aa18.43■□□□□ 0.54
PTPN11-206ENST00000635652 HIRIP3Q9BW71 556 aaPredicted RBP18.43■□□□□ 0.54
PTPN11-206ENST00000635652 DLC1Q96QB1 1528 aa18.43■□□□□ 0.54
PTPN11-206ENST00000635652 PMFBP1Q8TBY8 1022 aa18.42■□□□□ 0.54
PTPN11-206ENST00000635652 EP400Q96L91 3159 aa18.42■□□□□ 0.54
PTPN11-206ENST00000635652 ADGRB1O14514 1584 aa18.41■□□□□ 0.54
PTPN11-206ENST00000635652 MINK1Q8N4C8 1332 aaPredicted RBP18.41■□□□□ 0.54
PTPN11-206ENST00000635652 ATRNO75882 1429 aa18.4■□□□□ 0.54
PTPN11-206ENST00000635652 BCL9LQ86UU0 1499 aa18.4■□□□□ 0.54
PTPN11-206ENST00000635652 CABLES1Q8TDN4 633 aa18.39■□□□□ 0.53
PTPN11-206ENST00000635652 TNS3Q68CZ2 1445 aa18.39■□□□□ 0.53
PTPN11-206ENST00000635652 ANKARQ7Z5J8 1434 aa18.38■□□□□ 0.53
PTPN11-206ENST00000635652 UNC5CLQ8IV45 518 aa18.37■□□□□ 0.53
PTPN11-206ENST00000635652 GJD4Q96KN9 370 aaPredicted RBP18.37■□□□□ 0.53
PTPN11-206ENST00000635652 SBNO1A3KN83 1393 aa18.37■□□□□ 0.53
PTPN11-206ENST00000635652 ATAD2Q6PL18 1390 aa18.37■□□□□ 0.53
PTPN11-206ENST00000635652 ADGRB2O60241 1585 aa18.36■□□□□ 0.53
PTPN11-206ENST00000635652 USP32Q8NFA0 1604 aa18.36■□□□□ 0.53
PTPN11-206ENST00000635652 ARHGEF10O15013 1369 aa18.35■□□□□ 0.53
PTPN11-206ENST00000635652 EIF3AQ14152 1382 aaKnown RBP18.35■□□□□ 0.53
PTPN11-206ENST00000635652 WASLO00401 505 aaPredicted RBP18.35■□□□□ 0.53
PTPN11-206ENST00000635652 GPRASP1Q5JY77 1395 aa18.33■□□□□ 0.53
PTPN11-206ENST00000635652 NGDNQ8NEJ9 315 aaKnown RBP18.33■□□□□ 0.52
PTPN11-206ENST00000635652 SRCAPQ6ZRS2 3230 aa18.33■□□□□ 0.52
PTPN11-206ENST00000635652 SLIT2O94813 1529 aa18.33■□□□□ 0.52
PTPN11-206ENST00000635652 TNKS1BP1Q9C0C2 1729 aaKnown RBP18.32■□□□□ 0.52
PTPN11-206ENST00000635652 PRR36Q9H6K5 1346 aa18.32■□□□□ 0.52
PTPN11-206ENST00000635652 CCDC9Q9Y3X0 531 aaKnown RBP18.31■□□□□ 0.52
PTPN11-206ENST00000635652 TULP4Q9NRJ4 1543 aa18.31■□□□□ 0.52
PTPN11-206ENST00000635652 PAK3O75914 559 aaPredicted RBP18.3■□□□□ 0.52
PTPN11-206ENST00000635652 ARHGEF28Q8N1W1 1705 aaKnown RBP18.29■□□□□ 0.52
PTPN11-206ENST00000635652 RALGAPBQ86X10 1494 aa18.29■□□□□ 0.52
PTPN11-206ENST00000635652 NUDT16Q96DE0 195 aaKnown RBP18.28■□□□□ 0.52
PTPN11-206ENST00000635652 ABCA3Q99758 1704 aa18.28■□□□□ 0.52
PTPN11-206ENST00000635652 TRPM3Q9HCF6 1732 aaPredicted RBP18.27■□□□□ 0.52
PTPN11-206ENST00000635652 GLI3P10071 1580 aa18.27■□□□□ 0.52
PTPN11-206ENST00000635652 FAM83GA6ND36 823 aa18.27■□□□□ 0.52
PTPN11-206ENST00000635652 VPS72Q15906 364 aa18.27■□□□□ 0.52
PTPN11-206ENST00000635652 CDK19Q9BWU1 502 aa18.27■□□□□ 0.52
PTPN11-206ENST00000635652 PLCH1Q4KWH8 1693 aa18.26■□□□□ 0.51
PTPN11-206ENST00000635652 NWD2Q9ULI1 1742 aa18.26■□□□□ 0.51
PTPN11-206ENST00000635652 NBPF1Q3BBV0 1214 aa18.25■□□□□ 0.51
PTPN11-206ENST00000635652 ITSN1Q15811 1721 aa18.24■□□□□ 0.51
PTPN11-206ENST00000635652 KIAA1210Q9ULL0 1709 aa18.24■□□□□ 0.51
PTPN11-206ENST00000635652 CCDC125Q86Z20 511 aa18.24■□□□□ 0.51
PTPN11-206ENST00000635652 SEPT12Q8IYM1 358 aa18.24■□□□□ 0.51
PTPN11-206ENST00000635652 ALS2Q96Q42 1657 aa18.24■□□□□ 0.51
PTPN11-206ENST00000635652 BTG4Q9NY30 223 aa18.23■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms