RNA–Protein interactions for RNA: ENST00000635325.1

UBASH3A-209, Transcript of ubiquitin associated and SH3 domain containing A, humanhuman

TSL 1 (best)

Gene UBASH3A, Length 2,095 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBASH3A-209ENST00000635325 CCDC136Q96JN2 1154 aa16.51■□□□□ 0.23
UBASH3A-209ENST00000635325 C3P01024 1663 aa16.51■□□□□ 0.23
UBASH3A-209ENST00000635325 SAFB2Q14151 953 aaKnown RBP eCLIP16.5■□□□□ 0.23
UBASH3A-209ENST00000635325 CCDC146Q8IYE0 955 aa16.5■□□□□ 0.23
UBASH3A-209ENST00000635325 STK26Q9P289 416 aa16.49■□□□□ 0.23
UBASH3A-209ENST00000635325 A2ML1A8K2U0 1454 aa16.49■□□□□ 0.23
UBASH3A-209ENST00000635325 ZNF521Q96K83 1311 aa16.49■□□□□ 0.23
UBASH3A-209ENST00000635325 ADAMTSL3P82987 1691 aa16.49■□□□□ 0.23
UBASH3A-209ENST00000635325 EXOC6Q8TAG9 804 aa16.49■□□□□ 0.23
UBASH3A-209ENST00000635325 EVC2Q86UK5 1308 aa16.48■□□□□ 0.23
UBASH3A-209ENST00000635325 NLRP1Q9C000 1473 aa16.47■□□□□ 0.23
UBASH3A-209ENST00000635325 TNNT2P45379 298 aaPredicted RBP16.47■□□□□ 0.23
UBASH3A-209ENST00000635325 CABP2Q9NPB3 220 aa16.47■□□□□ 0.23
UBASH3A-209ENST00000635325 PLIN1O60240 522 aa16.46■□□□□ 0.23
UBASH3A-209ENST00000635325 STAG3Q9UJ98 1225 aa16.46■□□□□ 0.23
UBASH3A-209ENST00000635325 CEBPAP49715 358 aaPredicted RBP16.46■□□□□ 0.22
UBASH3A-209ENST00000635325 MORC1Q86VD1 984 aa16.46■□□□□ 0.22
UBASH3A-209ENST00000635325 RIMS1Q86UR5 1692 aaKnown RBP16.45■□□□□ 0.22
UBASH3A-209ENST00000635325 DUSP27Q5VZP5 1158 aa16.45■□□□□ 0.22
UBASH3A-209ENST00000635325 PTPRMP28827 1452 aa16.44■□□□□ 0.22
UBASH3A-209ENST00000635325 APAF1O14727 1248 aa16.44■□□□□ 0.22
UBASH3A-209ENST00000635325 POLR3AO14802 1390 aaPredicted RBP16.44■□□□□ 0.22
UBASH3A-209ENST00000635325 PUS7Q96PZ0 661 aaKnown RBP16.44■□□□□ 0.22
UBASH3A-209ENST00000635325 USP32Q8NFA0 1604 aa16.43■□□□□ 0.22
UBASH3A-209ENST00000635325 ANKRD36BQ8N2N9 1353 aa16.43■□□□□ 0.22
UBASH3A-209ENST00000635325 CGNL1Q0VF96 1302 aa16.43■□□□□ 0.22
UBASH3A-209ENST00000635325 GOLGA2Q08379 1002 aa16.42■□□□□ 0.22
UBASH3A-209ENST00000635325 YTHDC2Q9H6S0 1430 aaKnown RBP16.42■□□□□ 0.22
UBASH3A-209ENST00000635325 RIMS2Q9UQ26 1411 aa16.42■□□□□ 0.22
UBASH3A-209ENST00000635325 PRAM1Q96QH2 718 aa16.42■□□□□ 0.22
UBASH3A-209ENST00000635325 UBR1Q8IWV7 1749 aa16.41■□□□□ 0.22
UBASH3A-209ENST00000635325 MINK1Q8N4C8 1332 aaPredicted RBP16.41■□□□□ 0.22
UBASH3A-209ENST00000635325 ALKQ9UM73 1620 aa16.41■□□□□ 0.22
UBASH3A-209ENST00000635325 SPINK5Q9NQ38 1064 aaPredicted RBP16.41■□□□□ 0.22
UBASH3A-209ENST00000635325 SLFN5Q08AF3 891 aa16.4■□□□□ 0.22
UBASH3A-209ENST00000635325 SRPK2P78362 688 aaKnown RBP16.39■□□□□ 0.21
UBASH3A-209ENST00000635325 BCL11AQ9H165 835 aa16.39■□□□□ 0.21
UBASH3A-209ENST00000635325 SHPRHQ149N8 1683 aa16.39■□□□□ 0.21
UBASH3A-209ENST00000635325 PRKCSHP14314 528 aaPredicted RBP16.38■□□□□ 0.21
UBASH3A-209ENST00000635325 ABCF1Q8NE71 845 aaKnown RBP eCLIP16.38■□□□□ 0.21
UBASH3A-209ENST00000635325 DMRT2Q9Y5R5 561 aa16.38■□□□□ 0.21
UBASH3A-209ENST00000635325 A0A1W2PP64 1363 aa16.38■□□□□ 0.21
UBASH3A-209ENST00000635325 MTHFSP49914 203 aa16.38■□□□□ 0.21
UBASH3A-209ENST00000635325 C20orf194Q5TEA3 1177 aa16.38■□□□□ 0.21
UBASH3A-209ENST00000635325 TRMT2AQ8IZ69 625 aaKnown RBP16.38■□□□□ 0.21
UBASH3A-209ENST00000635325 POGKQ9P215 609 aa16.38■□□□□ 0.21
UBASH3A-209ENST00000635325 TMEM2Q9UHN6 1383 aa16.37■□□□□ 0.21
UBASH3A-209ENST00000635325 CRBNQ96SW2 442 aa16.37■□□□□ 0.21
UBASH3A-209ENST00000635325 FANCIQ9NVI1 1328 aa16.36■□□□□ 0.21
UBASH3A-209ENST00000635325 HDGFP51858 240 aaKnown RBP16.36■□□□□ 0.21
UBASH3A-209ENST00000635325 PLPPR3Q6T4P5 718 aa16.36■□□□□ 0.21
UBASH3A-209ENST00000635325 NSD2O96028 1365 aa16.35■□□□□ 0.21
UBASH3A-209ENST00000635325 ABCC11Q96J66 1382 aa16.35■□□□□ 0.21
UBASH3A-209ENST00000635325 NINLQ9Y2I6 1382 aa16.35■□□□□ 0.21
UBASH3A-209ENST00000635325 MSH5O43196 834 aa16.34■□□□□ 0.21
UBASH3A-209ENST00000635325 CD163L1Q9NR16 1453 aa16.34■□□□□ 0.21
UBASH3A-209ENST00000635325 SLIT1O75093 1534 aa16.34■□□□□ 0.21
UBASH3A-209ENST00000635325 ARHGAP23Q9P227 1491 aa16.33■□□□□ 0.21
UBASH3A-209ENST00000635325 ATAD2Q6PL18 1390 aa16.33■□□□□ 0.2
UBASH3A-209ENST00000635325 CEP170BQ9Y4F5 1589 aaPredicted RBP16.33■□□□□ 0.2
UBASH3A-209ENST00000635325 WWC1Q8IX03 1113 aa16.32■□□□□ 0.2
UBASH3A-209ENST00000635325 CDK19Q9BWU1 502 aa16.32■□□□□ 0.2
UBASH3A-209ENST00000635325 NKTRP30414 1462 aaKnown RBP16.32■□□□□ 0.2
UBASH3A-209ENST00000635325 E9PSI1 815 aa16.31■□□□□ 0.2
UBASH3A-209ENST00000635325 WAPLQ7Z5K2 1190 aa16.31■□□□□ 0.2
UBASH3A-209ENST00000635325 GGNBP2Q9H3C7 697 aa16.31■□□□□ 0.2
UBASH3A-209ENST00000635325 RRP7AQ9Y3A4 280 aaKnown RBP16.31■□□□□ 0.2
UBASH3A-209ENST00000635325 NGEFQ8N5V2 710 aa16.31■□□□□ 0.2
UBASH3A-209ENST00000635325 RUNDC1Q96C34 613 aa16.31■□□□□ 0.2
UBASH3A-209ENST00000635325 IQSEC2Q5JU85 1478 aa16.31■□□□□ 0.2
UBASH3A-209ENST00000635325 NRXN3Q9Y4C0 1643 aa16.31■□□□□ 0.2
UBASH3A-209ENST00000635325 ZNF142P52746 1687 aaPredicted RBP16.3■□□□□ 0.2
UBASH3A-209ENST00000635325 THEMISQ8N1K5 641 aaPredicted RBP16.3■□□□□ 0.2
UBASH3A-209ENST00000635325 CFAP53Q96M91 514 aa16.3■□□□□ 0.2
UBASH3A-209ENST00000635325 SETD1AO15047 1707 aaKnown RBP16.3■□□□□ 0.2
UBASH3A-209ENST00000635325 NEUROD2Q15784 382 aa16.3■□□□□ 0.2
UBASH3A-209ENST00000635325 TERF2IPQ9NYB0 399 aa16.3■□□□□ 0.2
UBASH3A-209ENST00000635325 FYB1O15117 783 aa16.29■□□□□ 0.2
UBASH3A-209ENST00000635325 TCP11L2Q8N4U5 519 aa16.29■□□□□ 0.2
UBASH3A-209ENST00000635325 PLEKHG1Q9ULL1 1385 aa16.28■□□□□ 0.2
UBASH3A-209ENST00000635325 CABP1Q9NZU7 370 aa16.28■□□□□ 0.2
UBASH3A-209ENST00000635325 ANP32EQ9BTT0 268 aa16.28■□□□□ 0.2
UBASH3A-209ENST00000635325 DLC1Q96QB1 1528 aa16.27■□□□□ 0.2
UBASH3A-209ENST00000635325 BCAR3O75815 825 aa16.27■□□□□ 0.2
UBASH3A-209ENST00000635325 METP08581 1390 aa16.27■□□□□ 0.19
UBASH3A-209ENST00000635325 PHF23Q9BUL5 403 aaPredicted RBP16.26■□□□□ 0.19
UBASH3A-209ENST00000635325 EID1Q9Y6B2 187 aa16.26■□□□□ 0.19
UBASH3A-209ENST00000635325 U2AF1L5P0DN76 240 aaPredicted RBP16.26■□□□□ 0.19
UBASH3A-209ENST00000635325 LTKP29376 864 aa16.26■□□□□ 0.19
UBASH3A-209ENST00000635325 U2AF1Q01081 240 aaKnown RBP eCLIP16.26■□□□□ 0.19
UBASH3A-209ENST00000635325 TXNDC2Q86VQ3 553 aa16.25■□□□□ 0.19
UBASH3A-209ENST00000635325 HDGFL2Q7Z4V5 671 aaPredicted RBP16.25■□□□□ 0.19
UBASH3A-209ENST00000635325 SKAP1Q86WV1 359 aa16.25■□□□□ 0.19
UBASH3A-209ENST00000635325 KDM4FA0A1W2PPD8 638 aa16.24■□□□□ 0.19
UBASH3A-209ENST00000635325 GOLGA6L2Q8N9W4 650 aaPredicted RBP16.24■□□□□ 0.19
UBASH3A-209ENST00000635325 SETD1BQ9UPS6 1966 aaKnown RBP16.24■□□□□ 0.19
UBASH3A-209ENST00000635325 MED14O60244 1454 aa16.24■□□□□ 0.19
UBASH3A-209ENST00000635325 COL3A1P02461 1466 aaPredicted RBP16.24■□□□□ 0.19
UBASH3A-209ENST00000635325 ADAMTS13Q76LX8 1427 aa16.23■□□□□ 0.19
UBASH3A-209ENST00000635325 ERICH6Q7L0X2 663 aa16.23■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 59.6 ms